RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 TPTE2Q6XPS3 522 aa13.03□□□□□ -0.32
SMIM27-201ENST00000425533 CDC37L1Q7L3B6 337 aa13.03□□□□□ -0.32
SMIM27-201ENST00000425533 TEX13AQ9BXU3 409 aaPredicted RBP13.03□□□□□ -0.32
SMIM27-201ENST00000425533 HIRAP54198 1017 aaPredicted RBP13.02□□□□□ -0.33
SMIM27-201ENST00000425533 PKN2Q16513 984 aaKnown RBP13.02□□□□□ -0.33
SMIM27-201ENST00000425533 CC2D2BQ6DHV5 1058 aa13.02□□□□□ -0.33
SMIM27-201ENST00000425533 DLK2Q6UY11 383 aa13.02□□□□□ -0.33
SMIM27-201ENST00000425533 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
SMIM27-201ENST00000425533 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
SMIM27-201ENST00000425533 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.33
SMIM27-201ENST00000425533 FAM177BA6PVY3 158 aa13.01□□□□□ -0.33
SMIM27-201ENST00000425533 GMPSP49915 693 aaPredicted RBP13.01□□□□□ -0.33
SMIM27-201ENST00000425533 CLEC4GQ6UXB4 293 aa13.01□□□□□ -0.33
SMIM27-201ENST00000425533 SLC51AQ86UW1 340 aa13.01□□□□□ -0.33
SMIM27-201ENST00000425533 CCDC102AQ96A19 550 aa13.01□□□□□ -0.33
SMIM27-201ENST00000425533 NPC1L1Q9UHC9 1359 aa13.01□□□□□ -0.33
SMIM27-201ENST00000425533 DLL1O00548 723 aa13□□□□□ -0.33
SMIM27-201ENST00000425533 ZNF157P51786 506 aaPredicted RBP13□□□□□ -0.33
SMIM27-201ENST00000425533 CXCL9Q07325 125 aa13□□□□□ -0.33
SMIM27-201ENST00000425533 ZNF790Q6PG37 636 aa13□□□□□ -0.33
SMIM27-201ENST00000425533 USP48Q86UV5 1035 aa13□□□□□ -0.33
SMIM27-201ENST00000425533 TRPM4Q8TD43 1214 aa13□□□□□ -0.33
SMIM27-201ENST00000425533 CSRNP1Q96S65 589 aa13□□□□□ -0.33
SMIM27-201ENST00000425533 ZNF652Q9Y2D9 606 aa13□□□□□ -0.33
SMIM27-201ENST00000425533 PPIP5K2O43314 1243 aa12.99□□□□□ -0.33
SMIM27-201ENST00000425533 IL13P35225 146 aa12.99□□□□□ -0.33
SMIM27-201ENST00000425533 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
SMIM27-201ENST00000425533 AOC3Q16853 763 aa12.99□□□□□ -0.33
SMIM27-201ENST00000425533 CRY2Q49AN0 593 aa12.99□□□□□ -0.33
SMIM27-201ENST00000425533 GRIPAP1Q4V328 841 aa12.99□□□□□ -0.33
SMIM27-201ENST00000425533 NIP7Q9Y221 180 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMIM27-201ENST00000425533 SZT2Q5T011 3432 aa12.98□□□□□ -0.33
SMIM27-201ENST00000425533 CDHR2Q9BYE9 1310 aa12.98□□□□□ -0.33
SMIM27-201ENST00000425533 MTHFSDQ2M296 383 aaKnown RBP12.98□□□□□ -0.33
SMIM27-201ENST00000425533 GBA2Q9HCG7 927 aaPredicted RBP12.98□□□□□ -0.33
SMIM27-201ENST00000425533 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
SMIM27-201ENST00000425533 ABCC12Q96J65 1359 aa12.97□□□□□ -0.33
SMIM27-201ENST00000425533 SLC10A3P09131 477 aa12.97□□□□□ -0.33
SMIM27-201ENST00000425533 C2orf69Q8N8R5 385 aa12.97□□□□□ -0.33
SMIM27-201ENST00000425533 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
SMIM27-201ENST00000425533 SHTN1A0MZ66 631 aa12.96□□□□□ -0.33
SMIM27-201ENST00000425533 TCERG1O14776 1098 aaKnown RBP12.96□□□□□ -0.33
SMIM27-201ENST00000425533 HMOX1P09601 288 aa12.96□□□□□ -0.33
SMIM27-201ENST00000425533 GTF2E1P29083 439 aaPredicted RBP12.96□□□□□ -0.33
SMIM27-201ENST00000425533 ZNF296Q8WUU4 475 aaPredicted RBP12.96□□□□□ -0.33
SMIM27-201ENST00000425533 FMNL2Q96PY5 1086 aa12.96□□□□□ -0.33
SMIM27-201ENST00000425533 BCL2L13Q9BXK5 485 aa12.96□□□□□ -0.33
SMIM27-201ENST00000425533 RIC1Q4ADV7 1423 aa12.96□□□□□ -0.34
SMIM27-201ENST00000425533 POLR2AP24928 1970 aaKnown RBP12.95□□□□□ -0.34
SMIM27-201ENST00000425533 PPEF1O14829 653 aaPredicted RBP12.95□□□□□ -0.34
SMIM27-201ENST00000425533 HOXA10P31260 410 aaPredicted RBP12.95□□□□□ -0.34
SMIM27-201ENST00000425533 FBXO46Q6PJ61 603 aaPredicted RBP12.95□□□□□ -0.34
SMIM27-201ENST00000425533 RPGRQ92834 1020 aaKnown RBP12.95□□□□□ -0.34
SMIM27-201ENST00000425533 BRCA2P51587 3418 aa12.94□□□□□ -0.34
SMIM27-201ENST00000425533 TEFQ10587 303 aa12.94□□□□□ -0.34
SMIM27-201ENST00000425533 KRT26Q7Z3Y9 468 aa12.94□□□□□ -0.34
SMIM27-201ENST00000425533 NUTM1Q86Y26 1132 aa12.94□□□□□ -0.34
SMIM27-201ENST00000425533 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
SMIM27-201ENST00000425533 VPS33BQ9H267 617 aa12.94□□□□□ -0.34
SMIM27-201ENST00000425533 CNOT7Q9UIV1 285 aaKnown RBP12.94□□□□□ -0.34
SMIM27-201ENST00000425533 USP16Q9Y5T5 823 aa12.94□□□□□ -0.34
SMIM27-201ENST00000425533 RBBP6Q7Z6E9 1792 aaKnown RBP12.94□□□□□ -0.34
SMIM27-201ENST00000425533 PAPPA2Q9BXP8 1791 aa12.94□□□□□ -0.34
SMIM27-201ENST00000425533 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
SMIM27-201ENST00000425533 ADM5C9JUS6 153 aa12.93□□□□□ -0.34
SMIM27-201ENST00000425533 RGL2O15211 777 aa12.93□□□□□ -0.34
SMIM27-201ENST00000425533 RAD17O75943 681 aa12.93□□□□□ -0.34
SMIM27-201ENST00000425533 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
SMIM27-201ENST00000425533 HLFQ16534 295 aa12.93□□□□□ -0.34
SMIM27-201ENST00000425533 COLQQ9Y215 455 aaPredicted RBP12.93□□□□□ -0.34
SMIM27-201ENST00000425533 PRAMEF22A3QJZ6 481 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 POTEFA5A3E0 1075 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 H7C1D1 291 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 KCNQ3O43525 872 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 CENPFP49454 3210 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 TNIP1Q15025 636 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 RASAL3Q86YV0 1011 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 MICALL2Q8IY33 904 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 IL17REQ8NFR9 667 aa12.92□□□□□ -0.34
SMIM27-201ENST00000425533 HTTP42858 3142 aa12.91□□□□□ -0.34
SMIM27-201ENST00000425533 SAMD7Q7Z3H4 446 aa12.91□□□□□ -0.34
SMIM27-201ENST00000425533 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
SMIM27-201ENST00000425533 SLC17A8Q8NDX2 589 aa12.91□□□□□ -0.34
SMIM27-201ENST00000425533 RBM17Q96I25 401 aaKnown RBP12.91□□□□□ -0.34
SMIM27-201ENST00000425533 CRAMP1Q96RY5 1269 aa12.91□□□□□ -0.34
SMIM27-201ENST00000425533 NYXQ9GZU5 481 aa12.91□□□□□ -0.34
SMIM27-201ENST00000425533 EGFRP00533 1210 aa12.9□□□□□ -0.34
SMIM27-201ENST00000425533 SUPT20HQ8NEM7 779 aa12.9□□□□□ -0.34
SMIM27-201ENST00000425533 RTFDC1Q9BY42 306 aaPredicted RBP12.9□□□□□ -0.34
SMIM27-201ENST00000425533 NUP98P52948 1817 aa12.9□□□□□ -0.34
SMIM27-201ENST00000425533 NBPF26B4DH59 902 aa12.89□□□□□ -0.35
SMIM27-201ENST00000425533 GPR25O00155 361 aa12.89□□□□□ -0.35
SMIM27-201ENST00000425533 TBC1D10BQ4KMP7 808 aaPredicted RBP12.89□□□□□ -0.35
SMIM27-201ENST00000425533 NBPF10Q6P3W6 841 aaKnown RBP12.89□□□□□ -0.35
SMIM27-201ENST00000425533 DCPSQ96C86 337 aaKnown RBP12.89□□□□□ -0.35
SMIM27-201ENST00000425533 POLR3GLQ9BT43 218 aa12.89□□□□□ -0.35
SMIM27-201ENST00000425533 TMX4Q9H1E5 349 aaPredicted RBP12.89□□□□□ -0.35
SMIM27-201ENST00000425533 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
SMIM27-201ENST00000425533 ATP6V0A2Q9Y487 856 aa12.89□□□□□ -0.35
SMIM27-201ENST00000425533 YDJCA8MPS7 323 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms