RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZNF541Q9H0D2 1346 aa16.14■□□□□ 0.17
HLA-DQB3-203ENST00000425319 HOXA10P31260 410 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB3-203ENST00000425319 CRY2Q49AN0 593 aa16.13■□□□□ 0.17
HLA-DQB3-203ENST00000425319 MAP1SQ66K74 1059 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB3-203ENST00000425319 USP50Q70EL3 339 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB3-203ENST00000425319 ZBTB3Q9H5J0 574 aa16.13■□□□□ 0.17
HLA-DQB3-203ENST00000425319 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
HLA-DQB3-203ENST00000425319 TIAM2Q8IVF5 1701 aa16.12■□□□□ 0.17
HLA-DQB3-203ENST00000425319 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB3-203ENST00000425319 PPEF1O14829 653 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB3-203ENST00000425319 GPTP24298 496 aa16.12■□□□□ 0.17
HLA-DQB3-203ENST00000425319 EIF4A1P60842 406 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB3-203ENST00000425319 HSP90AB3PQ58FF7 597 aa16.12■□□□□ 0.17
HLA-DQB3-203ENST00000425319 GIGYF2Q6Y7W6 1299 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB3-203ENST00000425319 WBP1LQ9NX94 342 aa16.12■□□□□ 0.17
HLA-DQB3-203ENST00000425319 SCN7AQ01118 1682 aa16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 RASSF10A6NK89 507 aa16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 PPIP5K2O43314 1243 aa16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 LMOD3Q0VAK6 560 aa16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 NFE2L2Q16236 605 aa16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 OLFM4Q6UX06 510 aa16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 UTP14AQ9BVJ6 771 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 DDX21Q9NR30 783 aaKnown RBP eCLIP16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 WDR33Q9C0J8 1336 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB3-203ENST00000425319 BBOX1O75936 387 aa16.1■□□□□ 0.17
HLA-DQB3-203ENST00000425319 EIF2S2P20042 333 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB3-203ENST00000425319 LBX1P52954 281 aa16.1■□□□□ 0.17
HLA-DQB3-203ENST00000425319 SUSD4Q5VX71 490 aa16.1■□□□□ 0.17
HLA-DQB3-203ENST00000425319 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
HLA-DQB3-203ENST00000425319 FER1L6Q2WGJ9 1857 aa16.1■□□□□ 0.17
HLA-DQB3-203ENST00000425319 CCDC88AQ3V6T2 1871 aa16.1■□□□□ 0.17
HLA-DQB3-203ENST00000425319 TNIP1Q15025 636 aa16.09■□□□□ 0.17
HLA-DQB3-203ENST00000425319 TTLL7Q6ZT98 887 aa16.09■□□□□ 0.17
HLA-DQB3-203ENST00000425319 ZNF34Q8IZ26 560 aa16.09■□□□□ 0.17
HLA-DQB3-203ENST00000425319 BABAM1Q9NWV8 329 aa16.09■□□□□ 0.17
HLA-DQB3-203ENST00000425319 SLX4Q8IY92 1834 aa16.09■□□□□ 0.17
HLA-DQB3-203ENST00000425319 GRM1Q13255 1194 aa16.08■□□□□ 0.16
HLA-DQB3-203ENST00000425319 DDX46Q7L014 1031 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB3-203ENST00000425319 BCL2L13Q9BXK5 485 aa16.08■□□□□ 0.16
HLA-DQB3-203ENST00000425319 ADARB2Q9NS39 739 aaKnown RBP16.08■□□□□ 0.16
HLA-DQB3-203ENST00000425319 IBTKQ9P2D0 1353 aaPredicted RBP16.08■□□□□ 0.16
HLA-DQB3-203ENST00000425319 ANKRD31Q8N7Z5 1873 aa16.08■□□□□ 0.16
HLA-DQB3-203ENST00000425319 DPP8Q6V1X1 898 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB3-203ENST00000425319 MPNDQ8N594 471 aa16.07■□□□□ 0.16
HLA-DQB3-203ENST00000425319 GPR101Q96P66 508 aaPredicted RBP16.07■□□□□ 0.16
HLA-DQB3-203ENST00000425319 ZNRF3Q9ULT6 936 aa16.07■□□□□ 0.16
HLA-DQB3-203ENST00000425319 ATP6V0A2Q9Y487 856 aa16.07■□□□□ 0.16
HLA-DQB3-203ENST00000425319 SCN4AP35499 1836 aa16.07■□□□□ 0.16
HLA-DQB3-203ENST00000425319 DICER1Q9UPY3 1922 aaKnown RBP16.07■□□□□ 0.16
HLA-DQB3-203ENST00000425319 VIRMAQ69YN4 1812 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB3-203ENST00000425319 EPS15P42566 896 aa16.06■□□□□ 0.16
HLA-DQB3-203ENST00000425319 RIPK4P57078 832 aa16.06■□□□□ 0.16
HLA-DQB3-203ENST00000425319 SLC10A5Q5PT55 438 aa16.06■□□□□ 0.16
HLA-DQB3-203ENST00000425319 TMC4Q7Z404 712 aa16.06■□□□□ 0.16
HLA-DQB3-203ENST00000425319 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
HLA-DQB3-203ENST00000425319 H7C1D1 291 aa16.05■□□□□ 0.16
HLA-DQB3-203ENST00000425319 NTSR2O95665 410 aa16.05■□□□□ 0.16
HLA-DQB3-203ENST00000425319 MAP2K2P36507 400 aa16.05■□□□□ 0.16
HLA-DQB3-203ENST00000425319 CIAPIN1Q6FI81 312 aa16.05■□□□□ 0.16
HLA-DQB3-203ENST00000425319 CAPNS2Q96L46 248 aa16.05■□□□□ 0.16
HLA-DQB3-203ENST00000425319 CA12O43570 354 aa16.04■□□□□ 0.16
HLA-DQB3-203ENST00000425319 AOC3Q16853 763 aa16.04■□□□□ 0.16
HLA-DQB3-203ENST00000425319 ZC3H15Q8WU90 426 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB3-203ENST00000425319 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
HLA-DQB3-203ENST00000425319 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB3-203ENST00000425319 RIC1Q4ADV7 1423 aa16.03■□□□□ 0.16
HLA-DQB3-203ENST00000425319 SIPA1L3O60292 1781 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB3-203ENST00000425319 COL11A2P13942 1736 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB3-203ENST00000425319 HSP90B1P14625 803 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB3-203ENST00000425319 SCNN1DP51172 638 aa16.03■□□□□ 0.16
HLA-DQB3-203ENST00000425319 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB3-203ENST00000425319 CDC37L1Q7L3B6 337 aa16.03■□□□□ 0.16
HLA-DQB3-203ENST00000425319 GPRC5DQ9NZD1 345 aa16.03■□□□□ 0.16
HLA-DQB3-203ENST00000425319 UBN2Q6ZU65 1347 aa16.02■□□□□ 0.16
HLA-DQB3-203ENST00000425319 G3V3G9 751 aa16.02■□□□□ 0.16
HLA-DQB3-203ENST00000425319 HSPA8P11142 646 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB3-203ENST00000425319 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
HLA-DQB3-203ENST00000425319 COPS6Q7L5N1 327 aa16.02■□□□□ 0.16
HLA-DQB3-203ENST00000425319 THUMPD2Q9BTF0 503 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB3-203ENST00000425319 TLL2Q9Y6L7 1015 aa16.02■□□□□ 0.16
HLA-DQB3-203ENST00000425319 ABCC12Q96J65 1359 aa16.01■□□□□ 0.15
HLA-DQB3-203ENST00000425319 SH3TC1Q8TE82 1336 aa16.01■□□□□ 0.15
HLA-DQB3-203ENST00000425319 CDHR2Q9BYE9 1310 aa16.01■□□□□ 0.15
HLA-DQB3-203ENST00000425319 BCORQ6W2J9 1755 aa16.01■□□□□ 0.15
HLA-DQB3-203ENST00000425319 CELF2O95319 508 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB3-203ENST00000425319 CXCL9Q07325 125 aa16.01■□□□□ 0.15
HLA-DQB3-203ENST00000425319 CYP4F22Q6NT55 531 aa16.01■□□□□ 0.15
HLA-DQB3-203ENST00000425319 RTFDC1Q9BY42 306 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQB3-203ENST00000425319 TCIRG1Q13488 830 aa16■□□□□ 0.15
HLA-DQB3-203ENST00000425319 GRAPQ13588 217 aa16■□□□□ 0.15
HLA-DQB3-203ENST00000425319 RALBP1Q15311 655 aa16■□□□□ 0.15
HLA-DQB3-203ENST00000425319 GRAPLQ8TC17 118 aaPredicted RBP16■□□□□ 0.15
HLA-DQB3-203ENST00000425319 ABHD8Q96I13 439 aa16■□□□□ 0.15
HLA-DQB3-203ENST00000425319 HHIPL1Q96JK4 782 aa16■□□□□ 0.15
HLA-DQB3-203ENST00000425319 CCDC85CA6NKD9 419 aa15.99■□□□□ 0.15
HLA-DQB3-203ENST00000425319 GMPSP49915 693 aaPredicted RBP15.99■□□□□ 0.15
HLA-DQB3-203ENST00000425319 KIAA2012Q0VF49 1180 aa15.99■□□□□ 0.15
HLA-DQB3-203ENST00000425319 EYA3Q99504 573 aa15.99■□□□□ 0.15
HLA-DQB3-203ENST00000425319 CHMP4AQ9BY43 222 aa15.99■□□□□ 0.15
HLA-DQB3-203ENST00000425319 ZNF408Q9H9D4 720 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms