RNA–Protein interactions for RNA: ENST00000425179.2

WDFY3-202, Transcript of WD repeat and FYVE domain containing 3, humanhuman

TSL 1 (best)

Gene WDFY3, Length 1,910 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDFY3-202ENST00000425179 RGS17Q9UGC6 210 aaPredicted RBP13.85□□□□□ -0.19
WDFY3-202ENST00000425179 PARP4Q9UKK3 1724 aaKnown RBP13.85□□□□□ -0.19
WDFY3-202ENST00000425179 NWD2Q9ULI1 1742 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 NEXNQ0ZGT2 675 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 G3BP1Q13283 466 aaKnown RBP eCLIP13.84□□□□□ -0.19
WDFY3-202ENST00000425179 KLHDC4Q8TBB5 520 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 EAF2Q96CJ1 260 aaPredicted RBP13.84□□□□□ -0.19
WDFY3-202ENST00000425179 SIL1Q9H173 461 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 STRN4Q9NRL3 753 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 DIAPH3Q9NSV4 1193 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 TLR7Q9NYK1 1049 aaKnown RBP13.84□□□□□ -0.19
WDFY3-202ENST00000425179 AFDNP55196 1824 aaKnown RBP13.84□□□□□ -0.19
WDFY3-202ENST00000425179 LAMB4A4D0S4 1761 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 JARID2Q92833 1246 aaPredicted RBP13.84□□□□□ -0.19
WDFY3-202ENST00000425179 INTS4Q96HW7 963 aaKnown RBP13.84□□□□□ -0.19
WDFY3-202ENST00000425179 FMNL2Q96PY5 1086 aa13.84□□□□□ -0.19
WDFY3-202ENST00000425179 CCDC8Q9H0W5 538 aaPredicted RBP13.84□□□□□ -0.19
WDFY3-202ENST00000425179 NRAPQ86VF7 1730 aa13.83□□□□□ -0.19
WDFY3-202ENST00000425179 BRD1O95696 1058 aa13.83□□□□□ -0.2
WDFY3-202ENST00000425179 EVA1CP58658 441 aa13.83□□□□□ -0.2
WDFY3-202ENST00000425179 PTH1RQ03431 593 aa13.83□□□□□ -0.2
WDFY3-202ENST00000425179 KIAA1211Q6ZU35 1233 aa13.83□□□□□ -0.2
WDFY3-202ENST00000425179 TTC14Q96N46 770 aa13.83□□□□□ -0.2
WDFY3-202ENST00000425179 COL5A2P05997 1499 aaPredicted RBP13.83□□□□□ -0.2
WDFY3-202ENST00000425179 PRPF40AO75400 957 aaKnown RBP13.82□□□□□ -0.2
WDFY3-202ENST00000425179 CABP4P57796 275 aa13.82□□□□□ -0.2
WDFY3-202ENST00000425179 ANKRD13DQ6ZTN6 518 aa13.82□□□□□ -0.2
WDFY3-202ENST00000425179 EVI5LQ96CN4 794 aa13.82□□□□□ -0.2
WDFY3-202ENST00000425179 ZNF772Q68DY9 489 aaPredicted RBP13.82□□□□□ -0.2
WDFY3-202ENST00000425179 GPT2Q8TD30 523 aa13.82□□□□□ -0.2
WDFY3-202ENST00000425179 RUFY2Q8WXA3 655 aa13.82□□□□□ -0.2
WDFY3-202ENST00000425179 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.81□□□□□ -0.2
WDFY3-202ENST00000425179 NCLP19338 710 aaKnown RBP13.81□□□□□ -0.2
WDFY3-202ENST00000425179 CAVIN1Q6NZI2 390 aaKnown RBP13.81□□□□□ -0.2
WDFY3-202ENST00000425179 QTRT2Q9H974 415 aaKnown RBP13.81□□□□□ -0.2
WDFY3-202ENST00000425179 RRAGDQ9NQL2 400 aaPredicted RBP13.81□□□□□ -0.2
WDFY3-202ENST00000425179 CPA1P15085 419 aa13.8□□□□□ -0.2
WDFY3-202ENST00000425179 AK2P54819 239 aa13.8□□□□□ -0.2
WDFY3-202ENST00000425179 CCDC9Q9Y3X0 531 aaKnown RBP13.8□□□□□ -0.2
WDFY3-202ENST00000425179 ATP5J2-PTCD1G3V325 749 aa13.8□□□□□ -0.2
WDFY3-202ENST00000425179 PTCD1O75127 700 aaKnown RBP13.8□□□□□ -0.2
WDFY3-202ENST00000425179 RFX5P48382 616 aaPredicted RBP13.8□□□□□ -0.2
WDFY3-202ENST00000425179 POTEAQ6S8J7 498 aa13.8□□□□□ -0.2
WDFY3-202ENST00000425179 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
WDFY3-202ENST00000425179 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
WDFY3-202ENST00000425179 LARP6Q9BRS8 491 aaKnown RBP13.8□□□□□ -0.2
WDFY3-202ENST00000425179 TRPC5Q9UL62 973 aaPredicted RBP13.8□□□□□ -0.2
WDFY3-202ENST00000425179 WDR17Q8IZU2 1322 aa13.79□□□□□ -0.2
WDFY3-202ENST00000425179 NMIQ13287 307 aaPredicted RBP13.79□□□□□ -0.2
WDFY3-202ENST00000425179 ZSCAN23Q3MJ62 389 aa13.79□□□□□ -0.2
WDFY3-202ENST00000425179 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
WDFY3-202ENST00000425179 UBE3BQ7Z3V4 1068 aa13.79□□□□□ -0.2
WDFY3-202ENST00000425179 BOLA2Q9H3K6 86 aa13.79□□□□□ -0.2
WDFY3-202ENST00000425179 RBM27Q9P2N5 1060 aaKnown RBP13.79□□□□□ -0.2
WDFY3-202ENST00000425179 RPAP1Q9BWH6 1393 aaPredicted RBP13.79□□□□□ -0.2
WDFY3-202ENST00000425179 CCDC171Q6TFL3 1326 aa13.79□□□□□ -0.2
WDFY3-202ENST00000425179 CASTP20810 708 aaKnown RBP13.78□□□□□ -0.2
WDFY3-202ENST00000425179 ZNF445P59923 1031 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 VPS72Q15906 364 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 ADCK5Q3MIX3 580 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 KCNB2Q92953 911 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 COPRSQ9NQ92 184 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 NSFL1CQ9UNZ2 370 aaKnown RBP13.78□□□□□ -0.2
WDFY3-202ENST00000425179 UBR2Q8IWV8 1755 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 ATRNO75882 1429 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 PAPPAQ13219 1627 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 CASP7P55210 303 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 PTPN12Q05209 780 aaKnown RBP13.78□□□□□ -0.2
WDFY3-202ENST00000425179 RABL6Q3YEC7 729 aaPredicted RBP13.78□□□□□ -0.2
WDFY3-202ENST00000425179 NBPF14Q5TI25 921 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 NBPF10Q6P3W6 841 aaKnown RBP13.78□□□□□ -0.2
WDFY3-202ENST00000425179 TOM1L2Q6ZVM7 507 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 PLBD2Q8NHP8 589 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 COL15A1P39059 1388 aa13.78□□□□□ -0.2
WDFY3-202ENST00000425179 PCDH11XQ9BZA7 1347 aa13.77□□□□□ -0.2
WDFY3-202ENST00000425179 PCDH11YQ9BZA8 1340 aa13.77□□□□□ -0.2
WDFY3-202ENST00000425179 KCPQ6ZWJ8 1503 aa13.77□□□□□ -0.2
WDFY3-202ENST00000425179 NUP188Q5SRE5 1749 aa13.77□□□□□ -0.2
WDFY3-202ENST00000425179 SHANK3Q9BYB0 1731 aa13.77□□□□□ -0.2
WDFY3-202ENST00000425179 A0A0D9SFI3 127 aa13.77□□□□□ -0.21
WDFY3-202ENST00000425179 LARGE1O95461 756 aa13.77□□□□□ -0.21
WDFY3-202ENST00000425179 ZCRB1Q8TBF4 217 aaKnown RBP13.77□□□□□ -0.21
WDFY3-202ENST00000425179 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.21
WDFY3-202ENST00000425179 JAKMIP1Q96N16 626 aaKnown RBP13.77□□□□□ -0.21
WDFY3-202ENST00000425179 LIMCH1Q9UPQ0 1083 aa13.77□□□□□ -0.21
WDFY3-202ENST00000425179 A0A087WZG4 1122 aa13.76□□□□□ -0.21
WDFY3-202ENST00000425179 TFCP2Q12800 502 aa13.76□□□□□ -0.21
WDFY3-202ENST00000425179 NECTIN1Q15223 517 aa13.76□□□□□ -0.21
WDFY3-202ENST00000425179 FSD1Q9BTV5 496 aa13.76□□□□□ -0.21
WDFY3-202ENST00000425179 RBM8AQ9Y5S9 174 aaKnown RBP13.76□□□□□ -0.21
WDFY3-202ENST00000425179 SPATA31A5Q5VU36 1347 aa13.76□□□□□ -0.21
WDFY3-202ENST00000425179 SPATA31A7Q8IWB4 1347 aa13.76□□□□□ -0.21
WDFY3-202ENST00000425179 HIP1O00291 1037 aa13.76□□□□□ -0.21
WDFY3-202ENST00000425179 DDX54Q8TDD1 881 aaKnown RBP13.76□□□□□ -0.21
WDFY3-202ENST00000425179 EDC3Q96F86 508 aaKnown RBP13.76□□□□□ -0.21
WDFY3-202ENST00000425179 SNRKQ9NRH2 765 aa13.76□□□□□ -0.21
WDFY3-202ENST00000425179 DBNLQ9UJU6 430 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms