RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 CRY2Q49AN0 593 aa21.49■■□□□ 1.03
SHANK2-207ENST00000425049 DPY19L2Q6NUT2 758 aa21.49■■□□□ 1.03
SHANK2-207ENST00000425049 RRAGCQ9HB90 399 aa21.49■■□□□ 1.03
SHANK2-207ENST00000425049 FER1L6Q2WGJ9 1857 aa21.49■■□□□ 1.03
SHANK2-207ENST00000425049 RTKN2Q8IZC4 609 aa21.48■■□□□ 1.03
SHANK2-207ENST00000425049 RNF123Q5XPI4 1314 aa21.48■■□□□ 1.03
SHANK2-207ENST00000425049 ZNF853P0CG23 659 aa21.47■■□□□ 1.03
SHANK2-207ENST00000425049 CCDC184Q52MB2 194 aa21.47■■□□□ 1.03
SHANK2-207ENST00000425049 RBM46Q8TBY0 533 aaKnown RBP21.47■■□□□ 1.03
SHANK2-207ENST00000425049 RBM17Q96I25 401 aaKnown RBP21.47■■□□□ 1.03
SHANK2-207ENST00000425049 HYPKQ9NX55 129 aa21.47■■□□□ 1.03
SHANK2-207ENST00000425049 FKBP4Q02790 459 aaKnown RBP eCLIP21.46■■□□□ 1.03
SHANK2-207ENST00000425049 C7orf43Q8WVR3 580 aa21.46■■□□□ 1.03
SHANK2-207ENST00000425049 NLRP3Q96P20 1036 aa21.46■■□□□ 1.03
SHANK2-207ENST00000425049 VEGFAP15692 232 aaPredicted RBP21.45■■□□□ 1.02
SHANK2-207ENST00000425049 TCIRG1Q13488 830 aa21.45■■□□□ 1.02
SHANK2-207ENST00000425049 PLBD2Q8NHP8 589 aa21.45■■□□□ 1.02
SHANK2-207ENST00000425049 CHMP4AQ9BY43 222 aa21.45■■□□□ 1.02
SHANK2-207ENST00000425049 TMX4Q9H1E5 349 aaPredicted RBP21.45■■□□□ 1.02
SHANK2-207ENST00000425049 CCDC88AQ3V6T2 1871 aa21.45■■□□□ 1.02
SHANK2-207ENST00000425049 CC2D2BQ6DHV5 1058 aa21.44■■□□□ 1.02
SHANK2-207ENST00000425049 NLRP10Q86W26 655 aa21.44■■□□□ 1.02
SHANK2-207ENST00000425049 TRMT112Q9UI30 125 aaKnown RBP21.44■■□□□ 1.02
SHANK2-207ENST00000425049 ELL2O00472 640 aaPredicted RBP21.43■■□□□ 1.02
SHANK2-207ENST00000425049 HOXA10P31260 410 aaPredicted RBP21.43■■□□□ 1.02
SHANK2-207ENST00000425049 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
SHANK2-207ENST00000425049 FSTL1Q12841 308 aa21.43■■□□□ 1.02
SHANK2-207ENST00000425049 ANKRD13DQ6ZTN6 518 aa21.43■■□□□ 1.02
SHANK2-207ENST00000425049 ANKRD36CQ5JPF3 1778 aa21.43■■□□□ 1.02
SHANK2-207ENST00000425049 PPEF1O14829 653 aaPredicted RBP21.42■■□□□ 1.02
SHANK2-207ENST00000425049 APLP1P51693 650 aa21.42■■□□□ 1.02
SHANK2-207ENST00000425049 OLFM4Q6UX06 510 aa21.42■■□□□ 1.02
SHANK2-207ENST00000425049 SH3TC1Q8TE82 1336 aa21.42■■□□□ 1.02
SHANK2-207ENST00000425049 CRAMP1Q96RY5 1269 aa21.42■■□□□ 1.02
SHANK2-207ENST00000425049 ZNF277Q9NRM2 450 aaPredicted RBP21.42■■□□□ 1.02
SHANK2-207ENST00000425049 DICER1Q9UPY3 1922 aaKnown RBP21.41■■□□□ 1.02
SHANK2-207ENST00000425049 GRIPAP1Q4V328 841 aa21.41■■□□□ 1.02
SHANK2-207ENST00000425049 SLC10A5Q5PT55 438 aa21.41■■□□□ 1.02
SHANK2-207ENST00000425049 SMC1BQ8NDV3 1235 aa21.41■■□□□ 1.02
SHANK2-207ENST00000425049 CCDC27Q2M243 656 aa21.4■■□□□ 1.02
SHANK2-207ENST00000425049 C3orf67Q6ZVT6 689 aa21.4■■□□□ 1.02
SHANK2-207ENST00000425049 RIC3Q7Z5B4 369 aa21.4■■□□□ 1.02
SHANK2-207ENST00000425049 HCLS1P14317 486 aaPredicted RBP21.39■■□□□ 1.01
SHANK2-207ENST00000425049 IARSP41252 1262 aaKnown RBP21.39■■□□□ 1.01
SHANK2-207ENST00000425049 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.01
SHANK2-207ENST00000425049 SYNE4Q8N205 404 aa21.39■■□□□ 1.01
SHANK2-207ENST00000425049 PSMD1Q99460 953 aa21.39■■□□□ 1.01
SHANK2-207ENST00000425049 TCERG1O14776 1098 aaKnown RBP21.38■■□□□ 1.01
SHANK2-207ENST00000425049 WWC1Q8IX03 1113 aa21.38■■□□□ 1.01
SHANK2-207ENST00000425049 C8orf58Q8NAV2 365 aa21.38■■□□□ 1.01
SHANK2-207ENST00000425049 CEP350Q5VT06 3117 aa21.38■■□□□ 1.01
SHANK2-207ENST00000425049 ATP5J2-PTCD1G3V325 749 aa21.37■■□□□ 1.01
SHANK2-207ENST00000425049 DDX46Q7L014 1031 aaKnown RBP21.37■■□□□ 1.01
SHANK2-207ENST00000425049 JDP2Q8WYK2 163 aa21.37■■□□□ 1.01
SHANK2-207ENST00000425049 TSR2Q969E8 191 aaKnown RBP21.37■■□□□ 1.01
SHANK2-207ENST00000425049 WDR90Q96KV7 1748 aa21.37■■□□□ 1.01
SHANK2-207ENST00000425049 DDNO94850 711 aaPredicted RBP21.36■■□□□ 1.01
SHANK2-207ENST00000425049 DDX58O95786 925 aaKnown RBP21.36■■□□□ 1.01
SHANK2-207ENST00000425049 ZNF428Q96B54 188 aa21.36■■□□□ 1.01
SHANK2-207ENST00000425049 ISCA1Q9BUE6 129 aa21.36■■□□□ 1.01
SHANK2-207ENST00000425049 ABCC4O15439 1325 aa21.35■■□□□ 1.01
SHANK2-207ENST00000425049 IQCA1LA6NCM1 817 aa21.35■■□□□ 1.01
SHANK2-207ENST00000425049 STK31Q9BXU1 1019 aa21.35■■□□□ 1.01
SHANK2-207ENST00000425049 IL16Q14005 1332 aa21.34■■□□□ 1.01
SHANK2-207ENST00000425049 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
SHANK2-207ENST00000425049 PHAXQ9H814 394 aaKnown RBP21.34■■□□□ 1.01
SHANK2-207ENST00000425049 ATP6V0A2Q9Y487 856 aa21.34■■□□□ 1.01
SHANK2-207ENST00000425049 SNED1Q8TER0 1413 aa21.33■■□□□ 1.01
SHANK2-207ENST00000425049 BBOX1O75936 387 aa21.33■■□□□ 1.01
SHANK2-207ENST00000425049 LARGE2Q8N3Y3 721 aa21.33■■□□□ 1.01
SHANK2-207ENST00000425049 FAM89AQ96GI7 184 aa21.33■■□□□ 1.01
SHANK2-207ENST00000425049 ZNF541Q9H0D2 1346 aa21.32■■□□□ 1
SHANK2-207ENST00000425049 HSP90B1P14625 803 aaKnown RBP21.32■■□□□ 1
SHANK2-207ENST00000425049 TRIM28Q13263 835 aaKnown RBP21.32■■□□□ 1
SHANK2-207ENST00000425049 GRAPQ13588 217 aa21.32■■□□□ 1
SHANK2-207ENST00000425049 TSPYL6Q8N831 410 aa21.32■■□□□ 1
SHANK2-207ENST00000425049 SUPT20HQ8NEM7 779 aa21.32■■□□□ 1
SHANK2-207ENST00000425049 GRAPLQ8TC17 118 aaPredicted RBP21.32■■□□□ 1
SHANK2-207ENST00000425049 SALL2Q9Y467 1007 aaPredicted RBP21.32■■□□□ 1
SHANK2-207ENST00000425049 POTECB2RU33 542 aa21.31■■□□□ 1
SHANK2-207ENST00000425049 EIF6P56537 245 aaKnown RBP21.31■■□□□ 1
SHANK2-207ENST00000425049 TWISTNBQ3B726 338 aaPredicted RBP21.31■■□□□ 1
SHANK2-207ENST00000425049 RTL5Q5HYW3 569 aaPredicted RBP21.31■■□□□ 1
SHANK2-207ENST00000425049 FAM9BQ8IZU0 186 aa21.31■■□□□ 1
SHANK2-207ENST00000425049 L3MBTL3Q96JM7 780 aaPredicted RBP21.31■■□□□ 1
SHANK2-207ENST00000425049 MYD88Q99836 296 aa21.31■■□□□ 1
SHANK2-207ENST00000425049 FZD9O00144 591 aa21.3■■□□□ 1
SHANK2-207ENST00000425049 PPIP5K2O43314 1243 aa21.3■■□□□ 1
SHANK2-207ENST00000425049 DPP8Q6V1X1 898 aaPredicted RBP21.3■■□□□ 1
SHANK2-207ENST00000425049 TMC4Q7Z404 712 aa21.3■■□□□ 1
SHANK2-207ENST00000425049 NIM1KQ8IY84 436 aa21.3■■□□□ 1
SHANK2-207ENST00000425049 LAMB2P55268 1798 aa21.29■■□□□ 1
SHANK2-207ENST00000425049 IRS4O14654 1257 aaPredicted RBP21.29■■□□□ 1
SHANK2-207ENST00000425049 SP8Q8IXZ3 490 aa21.29■■□□□ 1
SHANK2-207ENST00000425049 WDR63Q8IWG1 891 aa21.28■■□□□ 1
SHANK2-207ENST00000425049 GPC2Q8N158 579 aa21.28■■□□□ 1
SHANK2-207ENST00000425049 MPNDQ8N594 471 aa21.28■■□□□ 1
SHANK2-207ENST00000425049 ZBTB38Q8NAP3 1195 aaPredicted RBP21.28■■□□□ 1
SHANK2-207ENST00000425049 CCDC191Q8NCU4 936 aa21.28■■□□□ 1
SHANK2-207ENST00000425049 CWC25Q9NXE8 425 aaPredicted RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms