RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 LTKP29376 864 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 ME3Q16798 604 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 PRPF40BQ6NWY9 871 aaKnown RBP13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 PNMA6AP0CW24 399 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 MMP14P50281 582 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 ANAPC15P60006 121 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 TXNDC2Q86VQ3 553 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 FMNL2Q96PY5 1086 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 COL3A1P02461 1466 aaPredicted RBP13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 KIF1BPQ96EK5 621 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 TTC14Q96N46 770 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 EFCC1Q9HA90 598 aa13.32□□□□□ -0.28
SEC61A1-202ENST00000424880 GOLGA6L19H0YKK7 550 aa13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 SPATA32Q96LK8 384 aa13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 NSD2O96028 1365 aa13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 PTH1RQ03431 593 aa13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 SECISBP2LQ93073 1101 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 ERO1AQ96HE7 468 aa13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 HYPKQ9NX55 129 aa13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 TERF2IPQ9NYB0 399 aa13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 LRRFIP2Q9Y608 721 aaKnown RBP13.31□□□□□ -0.28
SEC61A1-202ENST00000424880 KRT85P78386 507 aa13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 BMS1Q14692 1282 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 OSBPL3Q9H4L5 887 aa13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 TAOK2Q9UL54 1235 aa13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 LOC102724159A0A0B4J2E5 919 aa13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 PWP2Q15269 919 aaKnown RBP13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 NYAP1Q6ZVC0 841 aa13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 PDRG1Q9NUG6 133 aa13.3□□□□□ -0.28
SEC61A1-202ENST00000424880 UBR1Q8IWV7 1749 aa13.29□□□□□ -0.28
SEC61A1-202ENST00000424880 NME9Q86XW9 330 aa13.29□□□□□ -0.28
SEC61A1-202ENST00000424880 CCAR2Q8N163 923 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-202ENST00000424880 GEMIN8Q9NWZ8 242 aaKnown RBP13.29□□□□□ -0.28
SEC61A1-202ENST00000424880 BECN2A8MW95 431 aa13.29□□□□□ -0.28
SEC61A1-202ENST00000424880 HOMER1Q86YM7 354 aa13.29□□□□□ -0.28
SEC61A1-202ENST00000424880 NCKAP5LQ9HCH0 1330 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 GNAI2P04899 355 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 LARP1Q6PKG0 1096 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 TPCN1Q9ULQ1 816 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 FOXO3O43524 673 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 CCZ1BP86790 482 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 CCZ1P86791 482 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 GOLGA8FQ08AF8 430 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 GOLGA8DPQ0D2H9 430 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 SNW1Q13573 536 aaKnown RBP13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 PGBD1Q96JS3 809 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 CEP170BQ9Y4F5 1589 aaPredicted RBP13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 MYO1CO00159 1063 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 TAF6LQ9Y6J9 622 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 FAM135BQ49AJ0 1406 aa13.28□□□□□ -0.28
SEC61A1-202ENST00000424880 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.28
SEC61A1-202ENST00000424880 ADAMTS13Q76LX8 1427 aa13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 SASH3O75995 380 aa13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 ISM2Q6H9L7 571 aa13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 SULT6B1Q6IMI4 303 aa13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 HDGFL2Q7Z4V5 671 aaPredicted RBP13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 RASSF4Q9H2L5 321 aa13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 DNAI1Q9UI46 699 aa13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 PTPRCP08575 1304 aa13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 SALL3Q9BXA9 1300 aa13.27□□□□□ -0.29
SEC61A1-202ENST00000424880 LMAN1P49257 510 aa13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 GNL2Q13823 731 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 ZSCAN26Q16670 478 aa13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 LSG1Q9H089 658 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 ZSWIM4Q9H7M6 989 aa13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 SGSM2O43147 1006 aa13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 E4F1Q66K89 784 aaPredicted RBP13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 TDRD7Q8NHU6 1098 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 PLEKHA4Q9H4M7 779 aa13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 H2AFXP16104 143 aaPredicted RBP13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 OAS2P29728 719 aaKnown RBP13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 IL13P35225 146 aa13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 SLFNL1Q499Z3 407 aa13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 GPATCH11Q8N954 259 aa13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 LEO1Q8WVC0 666 aaPredicted RBP13.26□□□□□ -0.29
SEC61A1-202ENST00000424880 WASLO00401 505 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 TMCO3Q6UWJ1 677 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 RNF216Q9NWF9 866 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 DHX16O60231 1041 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 JAK2O60674 1132 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 URI1O94763 535 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 HDGFP51858 240 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 SART3Q15020 963 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 FOXR1Q6PIV2 292 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 AOPEPQ8N6M6 819 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 UBXN4Q92575 508 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 SLC26A8Q96RN1 970 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 CCDC171Q6TFL3 1326 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 ROBO2Q9HCK4 1378 aa13.25□□□□□ -0.29
SEC61A1-202ENST00000424880 EP400NLQ6ZTU2 488 aa13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 KIF24Q5T7B8 1368 aa13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 HTATSF1O43719 755 aaKnown RBP13.24□□□□□ -0.29
SEC61A1-202ENST00000424880 CARD6Q9BX69 1037 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms