RNA–Protein interactions for RNA: ENST00000424339.1

EPHA4-206, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 492 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-206ENST00000424339 ADGRG1Q9Y653 693 aa9.28□□□□□ -0.92
EPHA4-206ENST00000424339 THSD7AQ9UPZ6 1657 aa9.28□□□□□ -0.92
EPHA4-206ENST00000424339 TNS2Q63HR2 1409 aa9.28□□□□□ -0.92
EPHA4-206ENST00000424339 MAPK8IP3Q9UPT6 1336 aa9.28□□□□□ -0.92
EPHA4-206ENST00000424339 PKD1L3Q7Z443 1732 aa9.28□□□□□ -0.92
EPHA4-206ENST00000424339 TTC24A2A3L6 582 aaPredicted RBP9.27□□□□□ -0.93
EPHA4-206ENST00000424339 SLC10A3P09131 477 aa9.27□□□□□ -0.93
EPHA4-206ENST00000424339 PLEKHO1Q53GL0 409 aaPredicted RBP9.27□□□□□ -0.93
EPHA4-206ENST00000424339 GAS2L2Q8NHY3 880 aa9.27□□□□□ -0.93
EPHA4-206ENST00000424339 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
EPHA4-206ENST00000424339 PCDH11XQ9BZA7 1347 aa9.27□□□□□ -0.93
EPHA4-206ENST00000424339 PCDH11YQ9BZA8 1340 aa9.27□□□□□ -0.93
EPHA4-206ENST00000424339 MEGF6O75095 1541 aa9.26□□□□□ -0.93
EPHA4-206ENST00000424339 EXOC5O00471 708 aa9.26□□□□□ -0.93
EPHA4-206ENST00000424339 HSP90AB1P08238 724 aaKnown RBP9.26□□□□□ -0.93
EPHA4-206ENST00000424339 HMOX1P09601 288 aa9.26□□□□□ -0.93
EPHA4-206ENST00000424339 PRKAR2BP31323 418 aa9.26□□□□□ -0.93
EPHA4-206ENST00000424339 SMCPP49901 116 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-206ENST00000424339 DDB1Q16531 1140 aa9.26□□□□□ -0.93
EPHA4-206ENST00000424339 PUS10Q3MIT2 529 aaKnown RBP9.26□□□□□ -0.93
EPHA4-206ENST00000424339 RUNDC1Q96C34 613 aa9.26□□□□□ -0.93
EPHA4-206ENST00000424339 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
EPHA4-206ENST00000424339 RGS17Q9UGC6 210 aaPredicted RBP9.26□□□□□ -0.93
EPHA4-206ENST00000424339 ADAMTS8Q9UP79 889 aa9.26□□□□□ -0.93
EPHA4-206ENST00000424339 LRRC37A3O60309 1634 aa9.25□□□□□ -0.93
EPHA4-206ENST00000424339 LMOD3Q0VAK6 560 aa9.25□□□□□ -0.93
EPHA4-206ENST00000424339 PTGDRQ13258 359 aa9.25□□□□□ -0.93
EPHA4-206ENST00000424339 FAM161AQ3B820 660 aa9.25□□□□□ -0.93
EPHA4-206ENST00000424339 CCDC184Q52MB2 194 aa9.25□□□□□ -0.93
EPHA4-206ENST00000424339 AEBP1Q8IUX7 1158 aa9.25□□□□□ -0.93
EPHA4-206ENST00000424339 USHBP1Q8N6Y0 703 aa9.25□□□□□ -0.93
EPHA4-206ENST00000424339 ZCRB1Q8TBF4 217 aaKnown RBP9.25□□□□□ -0.93
EPHA4-206ENST00000424339 PLEKHF1Q96S99 279 aa9.25□□□□□ -0.93
EPHA4-206ENST00000424339 BCL9O00512 1426 aa9.24□□□□□ -0.93
EPHA4-206ENST00000424339 TERTO14746 1132 aaKnown RBP9.24□□□□□ -0.93
EPHA4-206ENST00000424339 HTATSF1O43719 755 aaKnown RBP9.24□□□□□ -0.93
EPHA4-206ENST00000424339 C1orf141Q5JVX7 400 aa9.24□□□□□ -0.93
EPHA4-206ENST00000424339 PDE3BQ13370 1112 aa9.23□□□□□ -0.93
EPHA4-206ENST00000424339 AKAP4Q5JQC9 854 aa9.23□□□□□ -0.93
EPHA4-206ENST00000424339 POTEAQ6S8J7 498 aa9.23□□□□□ -0.93
EPHA4-206ENST00000424339 SEPT12Q8IYM1 358 aa9.23□□□□□ -0.93
EPHA4-206ENST00000424339 IFNL2Q8IZJ0 200 aa9.23□□□□□ -0.93
EPHA4-206ENST00000424339 FAM9BQ8IZU0 186 aa9.23□□□□□ -0.93
EPHA4-206ENST00000424339 FCF1Q9Y324 198 aaKnown RBP9.23□□□□□ -0.93
EPHA4-206ENST00000424339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.22□□□□□ -0.93
EPHA4-206ENST00000424339 FAM181BA6NEQ2 426 aa9.22□□□□□ -0.93
EPHA4-206ENST00000424339 ZBTB24O43167 697 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-206ENST00000424339 NFE2L2Q16236 605 aa9.22□□□□□ -0.93
EPHA4-206ENST00000424339 ZNF530Q6P9A1 599 aaPredicted RBP9.22□□□□□ -0.93
EPHA4-206ENST00000424339 MAP3K5Q99683 1374 aa9.22□□□□□ -0.93
EPHA4-206ENST00000424339 SHANK3Q9BYB0 1731 aa9.22□□□□□ -0.93
EPHA4-206ENST00000424339 RGS12O14924 1447 aa9.22□□□□□ -0.93
EPHA4-206ENST00000424339 GNAT3A8MTJ3 354 aa9.21□□□□□ -0.94
EPHA4-206ENST00000424339 CALD1Q05682 793 aaKnown RBP9.21□□□□□ -0.94
EPHA4-206ENST00000424339 CCDC27Q2M243 656 aa9.21□□□□□ -0.94
EPHA4-206ENST00000424339 MTHFSDQ2M296 383 aaKnown RBP9.21□□□□□ -0.94
EPHA4-206ENST00000424339 KRT27Q7Z3Y8 459 aa9.21□□□□□ -0.94
EPHA4-206ENST00000424339 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.94
EPHA4-206ENST00000424339 DCAF5Q96JK2 942 aa9.21□□□□□ -0.94
EPHA4-206ENST00000424339 SENP2Q9HC62 589 aa9.21□□□□□ -0.94
EPHA4-206ENST00000424339 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.94
EPHA4-206ENST00000424339 ADAMTS7Q9UKP4 1686 aa9.2□□□□□ -0.94
EPHA4-206ENST00000424339 CYP27B1O15528 508 aa9.2□□□□□ -0.94
EPHA4-206ENST00000424339 SNRPBP14678 240 aaKnown RBP9.2□□□□□ -0.94
EPHA4-206ENST00000424339 PHKG2P15735 406 aa9.2□□□□□ -0.94
EPHA4-206ENST00000424339 TMPOP42166 694 aaKnown RBP9.2□□□□□ -0.94
EPHA4-206ENST00000424339 FAM196AQ6ZSG2 479 aa9.2□□□□□ -0.94
EPHA4-206ENST00000424339 PHACTR3Q96KR7 559 aa9.2□□□□□ -0.94
EPHA4-206ENST00000424339 ATP13A2Q9NQ11 1180 aa9.2□□□□□ -0.94
EPHA4-206ENST00000424339 BRWD3Q6RI45 1802 aa9.19□□□□□ -0.94
EPHA4-206ENST00000424339 ERVV-2B6SEH9 535 aa9.19□□□□□ -0.94
EPHA4-206ENST00000424339 APAF1O14727 1248 aa9.19□□□□□ -0.94
EPHA4-206ENST00000424339 CCDC146Q8IYE0 955 aa9.19□□□□□ -0.94
EPHA4-206ENST00000424339 DDX54Q8TDD1 881 aaKnown RBP9.19□□□□□ -0.94
EPHA4-206ENST00000424339 SCN11AQ9UI33 1791 aa9.19□□□□□ -0.94
EPHA4-206ENST00000424339 DLG5Q8TDM6 1919 aa9.19□□□□□ -0.94
EPHA4-206ENST00000424339 MRC1P22897 1456 aa9.18□□□□□ -0.94
EPHA4-206ENST00000424339 HMGB2P26583 209 aaKnown RBP9.18□□□□□ -0.94
EPHA4-206ENST00000424339 MLLT3P42568 568 aaPredicted RBP9.18□□□□□ -0.94
EPHA4-206ENST00000424339 RIPK4P57078 832 aa9.18□□□□□ -0.94
EPHA4-206ENST00000424339 CEMIPQ8WUJ3 1361 aa9.18□□□□□ -0.94
EPHA4-206ENST00000424339 VIRMAQ69YN4 1812 aaKnown RBP9.17□□□□□ -0.94
EPHA4-206ENST00000424339 OATP04181 439 aa9.17□□□□□ -0.94
EPHA4-206ENST00000424339 MARCH10Q8NA82 808 aaPredicted RBP9.17□□□□□ -0.94
EPHA4-206ENST00000424339 SNIP1Q8TAD8 396 aaKnown RBP9.17□□□□□ -0.94
EPHA4-206ENST00000424339 BABAM1Q9NWV8 329 aa9.17□□□□□ -0.94
EPHA4-206ENST00000424339 KDM6AO15550 1401 aaPredicted RBP9.16□□□□□ -0.94
EPHA4-206ENST00000424339 IL16Q14005 1332 aa9.16□□□□□ -0.94
EPHA4-206ENST00000424339 RNMTO43148 476 aaKnown RBP9.16□□□□□ -0.94
EPHA4-206ENST00000424339 TEFQ10587 303 aa9.16□□□□□ -0.94
EPHA4-206ENST00000424339 WDR63Q8IWG1 891 aa9.16□□□□□ -0.94
EPHA4-206ENST00000424339 SLC16A10Q8TF71 515 aa9.16□□□□□ -0.94
EPHA4-206ENST00000424339 TRIM47Q96LD4 638 aa9.16□□□□□ -0.94
EPHA4-206ENST00000424339 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
EPHA4-206ENST00000424339 NHSQ6T4R5 1651 aa9.16□□□□□ -0.94
EPHA4-206ENST00000424339 SBF2Q86WG5 1849 aa9.15□□□□□ -0.94
EPHA4-206ENST00000424339 DOT1LQ8TEK3 1739 aa9.15□□□□□ -0.94
EPHA4-206ENST00000424339 FMNL1O95466 1100 aaPredicted RBP9.15□□□□□ -0.94
EPHA4-206ENST00000424339 SMPD1P17405 629 aa9.15□□□□□ -0.94
EPHA4-206ENST00000424339 CABP4P57796 275 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms