RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 BEND3Q5T5X7 828 aa17.66■□□□□ 0.42
ACTN4-203ENST00000424234 CLEC4GQ6UXB4 293 aa17.66■□□□□ 0.42
ACTN4-203ENST00000424234 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
ACTN4-203ENST00000424234 SPEF2Q9C093 1822 aa17.65■□□□□ 0.42
ACTN4-203ENST00000424234 CACNA1SQ13698 1873 aa17.65■□□□□ 0.42
ACTN4-203ENST00000424234 IGKV5-2P06315 115 aa17.65■□□□□ 0.42
ACTN4-203ENST00000424234 TCIRG1Q13488 830 aa17.65■□□□□ 0.42
ACTN4-203ENST00000424234 INTS3Q68E01 1043 aaKnown RBP17.65■□□□□ 0.42
ACTN4-203ENST00000424234 PDGFDQ9GZP0 370 aaPredicted RBP17.65■□□□□ 0.42
ACTN4-203ENST00000424234 IBTKQ9P2D0 1353 aaPredicted RBP17.64■□□□□ 0.41
ACTN4-203ENST00000424234 NEXNQ0ZGT2 675 aa17.64■□□□□ 0.41
ACTN4-203ENST00000424234 CWF19L2Q2TBE0 894 aaKnown RBP17.64■□□□□ 0.41
ACTN4-203ENST00000424234 HSP90AB3PQ58FF7 597 aa17.64■□□□□ 0.41
ACTN4-203ENST00000424234 LINS1Q8NG48 757 aa17.64■□□□□ 0.41
ACTN4-203ENST00000424234 ISCA1Q9BUE6 129 aa17.64■□□□□ 0.41
ACTN4-203ENST00000424234 RWDD1Q9H446 243 aaPredicted RBP17.64■□□□□ 0.41
ACTN4-203ENST00000424234 NEURL1BA8MQ27 555 aa17.63■□□□□ 0.41
ACTN4-203ENST00000424234 ATP5J2-PTCD1G3V325 749 aa17.63■□□□□ 0.41
ACTN4-203ENST00000424234 SOCS7O14512 581 aa17.63■□□□□ 0.41
ACTN4-203ENST00000424234 CCT4P50991 539 aaKnown RBP17.63■□□□□ 0.41
ACTN4-203ENST00000424234 ZNF34Q8IZ26 560 aa17.63■□□□□ 0.41
ACTN4-203ENST00000424234 SRCIN1Q9C0H9 1055 aa17.63■□□□□ 0.41
ACTN4-203ENST00000424234 TAF1P21675 1872 aa17.63■□□□□ 0.41
ACTN4-203ENST00000424234 GPTP24298 496 aa17.62■□□□□ 0.41
ACTN4-203ENST00000424234 R3HDM1Q15032 1099 aaKnown RBP17.62■□□□□ 0.41
ACTN4-203ENST00000424234 TBC1D9BQ66K14 1250 aa17.62■□□□□ 0.41
ACTN4-203ENST00000424234 ITPRIPQ8IWB1 547 aa17.62■□□□□ 0.41
ACTN4-203ENST00000424234 PCDHB15Q9Y5E8 787 aa17.62■□□□□ 0.41
ACTN4-203ENST00000424234 COL11A2P13942 1736 aaPredicted RBP17.62■□□□□ 0.41
ACTN4-203ENST00000424234 ALDH1L1O75891 902 aa17.62■□□□□ 0.41
ACTN4-203ENST00000424234 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
ACTN4-203ENST00000424234 NIP7Q9Y221 180 aaKnown RBP eCLIP17.62■□□□□ 0.41
ACTN4-203ENST00000424234 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
ACTN4-203ENST00000424234 CARMIL3Q8ND23 1372 aa17.61■□□□□ 0.41
ACTN4-203ENST00000424234 PSDA5PKW4 1024 aaPredicted RBP17.6■□□□□ 0.41
ACTN4-203ENST00000424234 TRIM28Q13263 835 aaKnown RBP17.6■□□□□ 0.41
ACTN4-203ENST00000424234 NFIXQ14938 502 aa17.6■□□□□ 0.41
ACTN4-203ENST00000424234 NLRP10Q86W26 655 aa17.6■□□□□ 0.41
ACTN4-203ENST00000424234 CCDC191Q8NCU4 936 aa17.6■□□□□ 0.41
ACTN4-203ENST00000424234 GCKRQ14397 625 aa17.59■□□□□ 0.41
ACTN4-203ENST00000424234 MSL1Q68DK7 614 aa17.59■□□□□ 0.41
ACTN4-203ENST00000424234 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
ACTN4-203ENST00000424234 CWC25Q9NXE8 425 aaPredicted RBP17.59■□□□□ 0.41
ACTN4-203ENST00000424234 KIAA1551Q9HCM1 1747 aa17.59■□□□□ 0.41
ACTN4-203ENST00000424234 PARP10Q53GL7 1025 aa17.58■□□□□ 0.41
ACTN4-203ENST00000424234 BRCA1P38398 1863 aaKnown RBP17.58■□□□□ 0.4
ACTN4-203ENST00000424234 DDR1Q08345 913 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 NLGN1Q8N2Q7 840 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 SLC16A10Q8TF71 515 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 MEIS3Q99687 375 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 A0A1B0GUL6 1792 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 NTSR2O95665 410 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 TM4SF1P30408 202 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 SUSD4Q5VX71 490 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 SETDB2Q96T68 719 aa17.57■□□□□ 0.4
ACTN4-203ENST00000424234 GRM8O00222 908 aa17.56■□□□□ 0.4
ACTN4-203ENST00000424234 POLRMTO00411 1230 aaKnown RBP17.56■□□□□ 0.4
ACTN4-203ENST00000424234 USP44Q9H0E7 712 aa17.56■□□□□ 0.4
ACTN4-203ENST00000424234 PDZRN3Q9UPQ7 1066 aa17.56■□□□□ 0.4
ACTN4-203ENST00000424234 UTYO14607 1347 aa17.56■□□□□ 0.4
ACTN4-203ENST00000424234 ABCC12Q96J65 1359 aa17.56■□□□□ 0.4
ACTN4-203ENST00000424234 HDAC1Q13547 482 aaPredicted RBP17.55■□□□□ 0.4
ACTN4-203ENST00000424234 RIC1Q4ADV7 1423 aa17.54■□□□□ 0.4
ACTN4-203ENST00000424234 FAM177BA6PVY3 158 aa17.54■□□□□ 0.4
ACTN4-203ENST00000424234 PCCAP05165 728 aaPredicted RBP17.54■□□□□ 0.4
ACTN4-203ENST00000424234 MMP10P09238 476 aa17.54■□□□□ 0.4
ACTN4-203ENST00000424234 NBPF7P0C2Y1 421 aaPredicted RBP17.54■□□□□ 0.4
ACTN4-203ENST00000424234 CASP7P55210 303 aa17.54■□□□□ 0.4
ACTN4-203ENST00000424234 UBE3BQ7Z3V4 1068 aa17.54■□□□□ 0.4
ACTN4-203ENST00000424234 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
ACTN4-203ENST00000424234 ZBTB7BO15156 539 aaPredicted RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 ZBTB7AO95365 584 aa17.53■□□□□ 0.4
ACTN4-203ENST00000424234 ZBTB38Q8NAP3 1195 aaPredicted RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 MTFR1LQ9H019 292 aa17.53■□□□□ 0.4
ACTN4-203ENST00000424234 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 C9orf78Q9NZ63 289 aaPredicted RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 TRMT112Q9UI30 125 aaKnown RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 SH3TC1Q8TE82 1336 aa17.53■□□□□ 0.4
ACTN4-203ENST00000424234 CDHR2Q9BYE9 1310 aa17.53■□□□□ 0.4
ACTN4-203ENST00000424234 H7C1W4 665 aa17.53■□□□□ 0.4
ACTN4-203ENST00000424234 RTL5Q5HYW3 569 aaPredicted RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 NBPF5PQ86XG9 351 aaPredicted RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 NUTM1Q86Y26 1132 aa17.53■□□□□ 0.4
ACTN4-203ENST00000424234 JARID2Q92833 1246 aaPredicted RBP17.53■□□□□ 0.4
ACTN4-203ENST00000424234 FAM89AQ96GI7 184 aa17.53■□□□□ 0.4
ACTN4-203ENST00000424234 NYXQ9GZU5 481 aa17.53■□□□□ 0.4
ACTN4-203ENST00000424234 GNAI3P08754 354 aa17.52■□□□□ 0.39
ACTN4-203ENST00000424234 UBTFL1P0CB47 393 aaPredicted RBP17.52■□□□□ 0.39
ACTN4-203ENST00000424234 SYNE4Q8N205 404 aa17.52■□□□□ 0.39
ACTN4-203ENST00000424234 ZBTB40Q9NUA8 1239 aa17.52■□□□□ 0.39
ACTN4-203ENST00000424234 SERPINB2P05120 415 aa17.51■□□□□ 0.39
ACTN4-203ENST00000424234 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
ACTN4-203ENST00000424234 C10orf71Q711Q0 1435 aa17.51■□□□□ 0.39
ACTN4-203ENST00000424234 COL4A1P02462 1669 aa17.51■□□□□ 0.39
ACTN4-203ENST00000424234 LRP5O75197 1615 aa17.51■□□□□ 0.39
ACTN4-203ENST00000424234 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
ACTN4-203ENST00000424234 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
ACTN4-203ENST00000424234 SUCLG2Q96I99 432 aa17.5■□□□□ 0.39
ACTN4-203ENST00000424234 C1orf115Q9H7X2 142 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms