RNA–Protein interactions for RNA: ENST00000423965.2

CLCN3P1-201, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

BASIC

Gene CLCN3P1, Length 1,017 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-201ENST00000423965 ZDHHC16Q969W1 377 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 COG3Q96JB2 828 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 SLC4A9Q96Q91 983 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 TERF2IPQ9NYB0 399 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 TSKSQ9UJT2 592 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 SPG7Q9UQ90 795 aa11.21□□□□□ -0.61
CLCN3P1-201ENST00000423965 CASP8AP2Q9UKL3 1982 aa11.21□□□□□ -0.62
CLCN3P1-201ENST00000423965 SCN4AP35499 1836 aa11.21□□□□□ -0.62
CLCN3P1-201ENST00000423965 KDRP35968 1356 aa11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 DICER1Q9UPY3 1922 aaKnown RBP11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 SOX10P56693 466 aa11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 EAPPQ56P03 285 aaPredicted RBP11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 HABP4Q5JVS0 413 aaKnown RBP11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 NBPF15Q8N660 670 aa11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 DDX21Q9NR30 783 aaKnown RBP eCLIP11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 SRP68Q9UHB9 627 aaKnown RBP11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 PCDHGA10Q9Y5H3 936 aa11.2□□□□□ -0.62
CLCN3P1-201ENST00000423965 PSEN2P49810 448 aa11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 MAP1SQ66K74 1059 aaPredicted RBP11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 CYP4F22Q6NT55 531 aa11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 C2CD5Q86YS7 1000 aa11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 HACL1Q9UJ83 578 aa11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 THSD7BQ9C0I4 1608 aa11.19□□□□□ -0.62
CLCN3P1-201ENST00000423965 FBLN1P23142 703 aa11.18□□□□□ -0.62
CLCN3P1-201ENST00000423965 EPHX2P34913 555 aa11.18□□□□□ -0.62
CLCN3P1-201ENST00000423965 LSM11P83369 360 aaKnown RBP eCLIP11.18□□□□□ -0.62
CLCN3P1-201ENST00000423965 TAOK3Q9H2K8 898 aa11.18□□□□□ -0.62
CLCN3P1-201ENST00000423965 SLC12A5Q9H2X9 1139 aa11.18□□□□□ -0.62
CLCN3P1-201ENST00000423965 ZNF831Q5JPB2 1677 aa11.17□□□□□ -0.62
CLCN3P1-201ENST00000423965 ZPR1O75312 459 aa11.17□□□□□ -0.62
CLCN3P1-201ENST00000423965 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
CLCN3P1-201ENST00000423965 TYW1BQ6NUM6 668 aa11.17□□□□□ -0.62
CLCN3P1-201ENST00000423965 SPNS2Q8IVW8 549 aa11.17□□□□□ -0.62
CLCN3P1-201ENST00000423965 IFNL2Q8IZJ0 200 aa11.17□□□□□ -0.62
CLCN3P1-201ENST00000423965 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
CLCN3P1-201ENST00000423965 ADAM33Q9BZ11 813 aa11.17□□□□□ -0.62
CLCN3P1-201ENST00000423965 GRXCR2A6NFK2 248 aa11.16□□□□□ -0.62
CLCN3P1-201ENST00000423965 C21orf2O43822 256 aa11.16□□□□□ -0.62
CLCN3P1-201ENST00000423965 PTPREP23469 700 aa11.16□□□□□ -0.62
CLCN3P1-201ENST00000423965 GRM1Q13255 1194 aa11.16□□□□□ -0.62
CLCN3P1-201ENST00000423965 EPAS1Q99814 870 aa11.16□□□□□ -0.62
CLCN3P1-201ENST00000423965 BCL2L12Q9HB09 334 aa11.16□□□□□ -0.62
CLCN3P1-201ENST00000423965 TLL2Q9Y6L7 1015 aa11.16□□□□□ -0.62
CLCN3P1-201ENST00000423965 INSRP06213 1382 aa11.16□□□□□ -0.62
CLCN3P1-201ENST00000423965 ERVV-2B6SEH9 535 aa11.15□□□□□ -0.62
CLCN3P1-201ENST00000423965 DLL1O00548 723 aa11.15□□□□□ -0.62
CLCN3P1-201ENST00000423965 AOC2O75106 756 aa11.15□□□□□ -0.62
CLCN3P1-201ENST00000423965 NBR1Q14596 966 aa11.15□□□□□ -0.62
CLCN3P1-201ENST00000423965 SOGA3Q5TF21 947 aa11.15□□□□□ -0.62
CLCN3P1-201ENST00000423965 FBXW7Q969H0 707 aa11.15□□□□□ -0.62
CLCN3P1-201ENST00000423965 HHIPL1Q96JK4 782 aa11.15□□□□□ -0.62
CLCN3P1-201ENST00000423965 MYH14Q7Z406 1995 aaKnown RBP11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 SERPINB2P05120 415 aa11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 PHKG2P15735 406 aa11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 CRKLP46109 303 aaKnown RBP11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 NFIXQ14938 502 aa11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 RRS1Q15050 365 aaKnown RBP11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 HSP90AB2PQ58FF8 381 aa11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 DMRTA1Q5VZB9 504 aa11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 PUS7Q96PZ0 661 aaKnown RBP11.14□□□□□ -0.63
CLCN3P1-201ENST00000423965 ADAMTSL1Q8N6G6 1762 aa11.13□□□□□ -0.63
CLCN3P1-201ENST00000423965 DLEC1Q9Y238 1755 aa11.13□□□□□ -0.63
CLCN3P1-201ENST00000423965 FER1L6Q2WGJ9 1857 aa11.13□□□□□ -0.63
CLCN3P1-201ENST00000423965 LTBP1Q14766 1721 aa11.13□□□□□ -0.63
CLCN3P1-201ENST00000423965 USPL1Q5W0Q7 1092 aa11.13□□□□□ -0.63
CLCN3P1-201ENST00000423965 CST9Q5W186 159 aa11.13□□□□□ -0.63
CLCN3P1-201ENST00000423965 A0A1W2PP64 1363 aa11.13□□□□□ -0.63
CLCN3P1-201ENST00000423965 KIF24Q5T7B8 1368 aa11.13□□□□□ -0.63
CLCN3P1-201ENST00000423965 CUL9Q8IWT3 2517 aa11.12□□□□□ -0.63
CLCN3P1-201ENST00000423965 PDE6BP35913 854 aa11.12□□□□□ -0.63
CLCN3P1-201ENST00000423965 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
CLCN3P1-201ENST00000423965 A0A0C4DFX4 3053 aa11.11□□□□□ -0.63
CLCN3P1-201ENST00000423965 FXR1P51114 621 aaKnown RBP eCLIP11.11□□□□□ -0.63
CLCN3P1-201ENST00000423965 SAPCD2Q86UD0 394 aa11.11□□□□□ -0.63
CLCN3P1-201ENST00000423965 CNKSR1Q969H4 720 aa11.11□□□□□ -0.63
CLCN3P1-201ENST00000423965 BRIP1Q9BX63 1249 aa11.11□□□□□ -0.63
CLCN3P1-201ENST00000423965 NARFQ9UHQ1 456 aa11.11□□□□□ -0.63
CLCN3P1-201ENST00000423965 TONSLQ96HA7 1378 aa11.11□□□□□ -0.63
CLCN3P1-201ENST00000423965 RAB3GAP2Q9H2M9 1393 aa11.11□□□□□ -0.63
CLCN3P1-201ENST00000423965 INTS5Q6P9B9 1019 aaKnown RBP11.1□□□□□ -0.63
CLCN3P1-201ENST00000423965 NRXN2Q9P2S2 1712 aa11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 FLT4P35916 1363 aa11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 MAP3K7O43318 606 aa11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 HSP90AB1P08238 724 aaKnown RBP11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 CIAPIN1Q6FI81 312 aa11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 GPC2Q8N158 579 aa11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 SAGE1Q9NXZ1 904 aa11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 AFDNP55196 1824 aaKnown RBP11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 NCAPD2Q15021 1401 aa11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 RNF123Q5XPI4 1314 aa11.09□□□□□ -0.63
CLCN3P1-201ENST00000423965 FZD9O00144 591 aa11.08□□□□□ -0.64
CLCN3P1-201ENST00000423965 PTCD1O75127 700 aaKnown RBP11.08□□□□□ -0.64
CLCN3P1-201ENST00000423965 NOGQ13253 232 aa11.08□□□□□ -0.64
CLCN3P1-201ENST00000423965 ADGRD1Q6QNK2 874 aa11.08□□□□□ -0.64
CLCN3P1-201ENST00000423965 ZNF541Q9H0D2 1346 aa11.08□□□□□ -0.64
CLCN3P1-201ENST00000423965 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms