RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 MSNP26038 577 aaKnown RBP9.88□□□□□ -0.83
CHD7-201ENST00000423902 FOSBP53539 338 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 PDIA4P13667 645 aaKnown RBP9.88□□□□□ -0.83
CHD7-201ENST00000423902 GGA1Q9UJY5 639 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 LRRIQ1Q96JM4 1722 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 FAM83GA6ND36 823 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 NUCB2P80303 420 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 SH3TC1Q8TE82 1336 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 RANBP6O60518 1105 aaKnown RBP9.88□□□□□ -0.83
CHD7-201ENST00000423902 HMGB1P09429 215 aaKnown RBP9.88□□□□□ -0.83
CHD7-201ENST00000423902 ATP2B3Q16720 1220 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 BLOC1S2Q6QNY1 142 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 MADDQ8WXG6 1647 aa9.88□□□□□ -0.83
CHD7-201ENST00000423902 ZFYP08048 801 aaPredicted RBP9.87□□□□□ -0.83
CHD7-201ENST00000423902 BOLA2Q9H3K6 86 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 BCS1LQ9Y276 419 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 ZNF213O14771 459 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 STIM1Q13586 685 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 RAB34Q9BZG1 259 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 WWC3Q9ULE0 1092 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 TMEM57Q8N5G2 664 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 IL15P40933 162 aaPredicted RBP9.87□□□□□ -0.83
CHD7-201ENST00000423902 CLTCL1P53675 1640 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 RTL1A6NKG5 1358 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 MTHFSDQ2M296 383 aaKnown RBP9.87□□□□□ -0.83
CHD7-201ENST00000423902 NAA16Q6N069 864 aaPredicted RBP9.87□□□□□ -0.83
CHD7-201ENST00000423902 F8W031 263 aaPredicted RBP9.87□□□□□ -0.83
CHD7-201ENST00000423902 SSH1Q8WYL5 1049 aa9.87□□□□□ -0.83
CHD7-201ENST00000423902 EAPPQ56P03 285 aaPredicted RBP9.86□□□□□ -0.83
CHD7-201ENST00000423902 NAT10Q9H0A0 1025 aaKnown RBP9.86□□□□□ -0.83
CHD7-201ENST00000423902 LDHBP07195 334 aaKnown RBP9.86□□□□□ -0.83
CHD7-201ENST00000423902 DESP17661 470 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 CWC27Q6UX04 472 aaKnown RBP9.86□□□□□ -0.83
CHD7-201ENST00000423902 CHD1LQ86WJ1 897 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 IL1RAPL2Q9NP60 686 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 CHMP4BP1P59074 171 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 VTI1AQ96AJ9 217 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 RIMBP2O15034 1052 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 ADGRL3Q9HAR2 1447 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 CEP131Q9UPN4 1083 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 PIK3C2BO00750 1634 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 UFL1O94874 794 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 C22orf23Q9BZE7 217 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.86□□□□□ -0.839e-7■■■□□ 18.9
CHD7-201ENST00000423902 TMOD4Q9NZQ9 345 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 PTPRTO14522 1441 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 MAP4K4O95819 1239 aaPredicted RBP9.86□□□□□ -0.83
CHD7-201ENST00000423902 PAF1Q8N7H5 531 aa9.86□□□□□ -0.83
CHD7-201ENST00000423902 HOXB7P09629 217 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 AEBP1Q8IUX7 1158 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 TNFAIP1Q13829 316 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 SH2D4AQ9H788 454 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 EXOC6BQ9Y2D4 811 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 FBLN1P23142 703 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 METP08581 1390 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 MYO5BQ9ULV0 1848 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 RABEP1Q15276 862 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 INO80Q9ULG1 1556 aaPredicted RBP9.85□□□□□ -0.83
CHD7-201ENST00000423902 PDE8AO60658 829 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 GNAT2P19087 354 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 PLS1Q14651 629 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 SKOR2Q2VWA4 1001 aaPredicted RBP9.85□□□□□ -0.83
CHD7-201ENST00000423902 C2CD5Q86YS7 1000 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 EVI5LQ96CN4 794 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 ZNF408Q9H9D4 720 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 TSPY3P0CV98 308 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 TSPY8P0CW00 308 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 BRINP3Q76B58 766 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 TSPY2A6NKD2 308 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 MX1P20591 662 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 TRPM1Q7Z4N2 1603 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 RDXP35241 583 aaKnown RBP9.85□□□□□ -0.83
CHD7-201ENST00000423902 CCDC191Q8NCU4 936 aa9.85□□□□□ -0.83
CHD7-201ENST00000423902 PLBD2Q8NHP8 589 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 KAT14Q9H8E8 782 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 WDR17Q8IZU2 1322 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 F6X3S4 739 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 PIP4K2AP48426 406 aaPredicted RBP9.84□□□□□ -0.83
CHD7-201ENST00000423902 SYCP1Q15431 976 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 PPIP5K2O43314 1243 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 KIF22Q14807 665 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 DIP2AQ14689 1571 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 MAGEC2Q9UBF1 373 aaPredicted RBP9.84□□□□□ -0.83
CHD7-201ENST00000423902 ALKQ9UM73 1620 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 LINS1Q8NG48 757 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 DDX21Q9NR30 783 aaKnown RBP eCLIP9.84□□□□□ -0.83
CHD7-201ENST00000423902 PRDM15P57071 1507 aaPredicted RBP9.84□□□□□ -0.83
CHD7-201ENST00000423902 OFD1O75665 1012 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 PDE4CQ08493 712 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 WDR66Q8TBY9 1149 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 FOXD4L6Q3SYB3 417 aaPredicted RBP9.84□□□□□ -0.83
CHD7-201ENST00000423902 FOXD4L3Q6VB84 417 aaPredicted RBP9.84□□□□□ -0.83
CHD7-201ENST00000423902 MFSD6Q6ZSS7 791 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 TBC1D22AQ8WUA7 517 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 ATP2B1P20020 1258 aa9.84□□□□□ -0.83
CHD7-201ENST00000423902 MSL1Q68DK7 614 aa9.83□□□□□ -0.84
CHD7-201ENST00000423902 OTUD7BQ6GQQ9 843 aa9.83□□□□□ -0.84
CHD7-201ENST00000423902 ZHX3Q9H4I2 956 aa9.83□□□□□ -0.84
CHD7-201ENST00000423902 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms