RNA–Protein interactions for RNA: ENST00000423616.1

RHBDD1-204, Transcript of rhomboid domain containing 1, humanhuman

TSL 5

Gene RHBDD1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-204ENST00000423616 RNF186Q9NXI6 227 aa13.03□□□□□ -0.32
RHBDD1-204ENST00000423616 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
RHBDD1-204ENST00000423616 ZNF652Q9Y2D9 606 aa13.03□□□□□ -0.32
RHBDD1-204ENST00000423616 CAMTA2O94983 1202 aa13.02□□□□□ -0.33
RHBDD1-204ENST00000423616 RGMBQ6NW40 437 aa13.02□□□□□ -0.33
RHBDD1-204ENST00000423616 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
RHBDD1-204ENST00000423616 CLEC4GQ6UXB4 293 aa13.02□□□□□ -0.33
RHBDD1-204ENST00000423616 TPTE2Q6XPS3 522 aa13.02□□□□□ -0.33
RHBDD1-204ENST00000423616 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
RHBDD1-204ENST00000423616 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
RHBDD1-204ENST00000423616 DLL1O00548 723 aa13.01□□□□□ -0.33
RHBDD1-204ENST00000423616 ZIC5Q96T25 663 aa13.01□□□□□ -0.33
RHBDD1-204ENST00000423616 RNF216Q9NWF9 866 aaPredicted RBP13.01□□□□□ -0.33
RHBDD1-204ENST00000423616 RGL2O15211 777 aa13□□□□□ -0.33
RHBDD1-204ENST00000423616 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
RHBDD1-204ENST00000423616 KIF23Q02241 960 aaPredicted RBP13□□□□□ -0.33
RHBDD1-204ENST00000423616 AEBP1Q8IUX7 1158 aa13□□□□□ -0.33
RHBDD1-204ENST00000423616 VPS33BQ9H267 617 aa13□□□□□ -0.33
RHBDD1-204ENST00000423616 RNF39Q9H2S5 420 aa13□□□□□ -0.33
RHBDD1-204ENST00000423616 HDAC9Q9UKV0 1011 aa13□□□□□ -0.33
RHBDD1-204ENST00000423616 CENPFP49454 3210 aa13□□□□□ -0.33
RHBDD1-204ENST00000423616 HTTP42858 3142 aa12.99□□□□□ -0.33
RHBDD1-204ENST00000423616 HEG1Q9ULI3 1381 aa12.99□□□□□ -0.33
RHBDD1-204ENST00000423616 SULT6B1Q6IMI4 303 aa12.99□□□□□ -0.33
RHBDD1-204ENST00000423616 DZIP3Q86Y13 1208 aaKnown RBP12.99□□□□□ -0.33
RHBDD1-204ENST00000423616 C2orf69Q8N8R5 385 aa12.99□□□□□ -0.33
RHBDD1-204ENST00000423616 LGR6Q9HBX8 967 aa12.99□□□□□ -0.33
RHBDD1-204ENST00000423616 SZT2Q5T011 3432 aa12.99□□□□□ -0.33
RHBDD1-204ENST00000423616 TNNT2P45379 298 aaPredicted RBP12.98□□□□□ -0.33
RHBDD1-204ENST00000423616 ZNF157P51786 506 aaPredicted RBP12.98□□□□□ -0.33
RHBDD1-204ENST00000423616 FBXO46Q6PJ61 603 aaPredicted RBP12.98□□□□□ -0.33
RHBDD1-204ENST00000423616 RBBP6Q7Z6E9 1792 aaKnown RBP12.97□□□□□ -0.33
RHBDD1-204ENST00000423616 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
RHBDD1-204ENST00000423616 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
RHBDD1-204ENST00000423616 PPIP5K2O43314 1243 aa12.96□□□□□ -0.33
RHBDD1-204ENST00000423616 SLC10A3P09131 477 aa12.96□□□□□ -0.33
RHBDD1-204ENST00000423616 CRY2Q49AN0 593 aa12.96□□□□□ -0.33
RHBDD1-204ENST00000423616 TMX4Q9H1E5 349 aaPredicted RBP12.96□□□□□ -0.33
RHBDD1-204ENST00000423616 COL6A3P12111 3177 aa12.95□□□□□ -0.34
RHBDD1-204ENST00000423616 BRCA2P51587 3418 aa12.95□□□□□ -0.34
RHBDD1-204ENST00000423616 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
RHBDD1-204ENST00000423616 GMPSP49915 693 aaPredicted RBP12.95□□□□□ -0.34
RHBDD1-204ENST00000423616 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
RHBDD1-204ENST00000423616 BCL2L13Q9BXK5 485 aa12.95□□□□□ -0.34
RHBDD1-204ENST00000423616 ZNRF3Q9ULT6 936 aa12.95□□□□□ -0.34
RHBDD1-204ENST00000423616 KIF7Q2M1P5 1343 aa12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 TNIP1Q15025 636 aa12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 NCBP3Q53F19 620 aaKnown RBP12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 RPGRQ92834 1020 aaKnown RBP12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 ZNF496Q96IT1 587 aaPredicted RBP12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 CSRNP1Q96S65 589 aa12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 NIP7Q9Y221 180 aaKnown RBP eCLIP12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 RIC1Q4ADV7 1423 aa12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 CUL9Q8IWT3 2517 aa12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 SIPA1L3O60292 1781 aaPredicted RBP12.94□□□□□ -0.34
RHBDD1-204ENST00000423616 H7C1D1 291 aa12.93□□□□□ -0.34
RHBDD1-204ENST00000423616 CXCL9Q07325 125 aa12.93□□□□□ -0.34
RHBDD1-204ENST00000423616 ZNF790Q6PG37 636 aa12.93□□□□□ -0.34
RHBDD1-204ENST00000423616 SLC17A8Q8NDX2 589 aa12.93□□□□□ -0.34
RHBDD1-204ENST00000423616 FMNL2Q96PY5 1086 aa12.93□□□□□ -0.34
RHBDD1-204ENST00000423616 NYXQ9GZU5 481 aa12.93□□□□□ -0.34
RHBDD1-204ENST00000423616 A1BGP04217 495 aa12.92□□□□□ -0.34
RHBDD1-204ENST00000423616 KRT26Q7Z3Y9 468 aa12.92□□□□□ -0.34
RHBDD1-204ENST00000423616 USP48Q86UV5 1035 aa12.92□□□□□ -0.34
RHBDD1-204ENST00000423616 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
RHBDD1-204ENST00000423616 PPEF1O14829 653 aaPredicted RBP12.91□□□□□ -0.34
RHBDD1-204ENST00000423616 HOXA10P31260 410 aaPredicted RBP12.91□□□□□ -0.34
RHBDD1-204ENST00000423616 HIRAP54198 1017 aaPredicted RBP12.91□□□□□ -0.34
RHBDD1-204ENST00000423616 TEFQ10587 303 aa12.91□□□□□ -0.34
RHBDD1-204ENST00000423616 AOC3Q16853 763 aa12.91□□□□□ -0.34
RHBDD1-204ENST00000423616 TRPM4Q8TD43 1214 aa12.91□□□□□ -0.34
RHBDD1-204ENST00000423616 DCPSQ96C86 337 aaKnown RBP12.9□□□□□ -0.34
RHBDD1-204ENST00000423616 CNOT7Q9UIV1 285 aaKnown RBP12.9□□□□□ -0.34
RHBDD1-204ENST00000423616 IL13P35225 146 aa12.89□□□□□ -0.35
RHBDD1-204ENST00000423616 RBM17Q96I25 401 aaKnown RBP12.89□□□□□ -0.35
RHBDD1-204ENST00000423616 CRAMP1Q96RY5 1269 aa12.89□□□□□ -0.35
RHBDD1-204ENST00000423616 COLQQ9Y215 455 aaPredicted RBP12.89□□□□□ -0.35
RHBDD1-204ENST00000423616 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
RHBDD1-204ENST00000423616 PAPPA2Q9BXP8 1791 aa12.89□□□□□ -0.35
RHBDD1-204ENST00000423616 POLR2AP24928 1970 aaKnown RBP12.89□□□□□ -0.35
RHBDD1-204ENST00000423616 TRIOBPQ9H2D6 2365 aa12.88□□□□□ -0.35
RHBDD1-204ENST00000423616 FAM177BA6PVY3 158 aa12.88□□□□□ -0.35
RHBDD1-204ENST00000423616 FKBP1BP68106 108 aa12.88□□□□□ -0.35
RHBDD1-204ENST00000423616 RASAL3Q86YV0 1011 aa12.88□□□□□ -0.35
RHBDD1-204ENST00000423616 MICALL2Q8IY33 904 aa12.88□□□□□ -0.35
RHBDD1-204ENST00000423616 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
RHBDD1-204ENST00000423616 RANBP2P49792 3224 aaKnown RBP12.87□□□□□ -0.35
RHBDD1-204ENST00000423616 GPR25O00155 361 aa12.87□□□□□ -0.35
RHBDD1-204ENST00000423616 MTHFSDQ2M296 383 aaKnown RBP12.87□□□□□ -0.35
RHBDD1-204ENST00000423616 DPF2Q92785 391 aa12.87□□□□□ -0.35
RHBDD1-204ENST00000423616 RTFDC1Q9BY42 306 aaPredicted RBP12.87□□□□□ -0.35
RHBDD1-204ENST00000423616 FKTNO75072 461 aa12.86□□□□□ -0.35
RHBDD1-204ENST00000423616 RAD17O75943 681 aa12.86□□□□□ -0.35
RHBDD1-204ENST00000423616 SULF1Q8IWU6 871 aa12.86□□□□□ -0.35
RHBDD1-204ENST00000423616 ATP6V0A2Q9Y487 856 aa12.86□□□□□ -0.35
RHBDD1-204ENST00000423616 KIAA0100Q14667 2235 aaKnown RBP12.85□□□□□ -0.35
RHBDD1-204ENST00000423616 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
RHBDD1-204ENST00000423616 TBC1D8O95759 1140 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms