RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 CARMIL1Q5VZK9 1371 aa9.39□□□□□ -0.91
LINC00458-201ENST00000423442 KIF21BO75037 1637 aa9.39□□□□□ -0.91
LINC00458-201ENST00000423442 NCOA4Q13772 614 aa9.39□□□□□ -0.91
LINC00458-201ENST00000423442 DOC2BQ14184 412 aa9.39□□□□□ -0.91
LINC00458-201ENST00000423442 LRRC69Q6ZNQ3 347 aa9.39□□□□□ -0.91
LINC00458-201ENST00000423442 ALG2Q9H553 416 aa9.39□□□□□ -0.91
LINC00458-201ENST00000423442 DISP1Q96F81 1524 aa9.39□□□□□ -0.91
LINC00458-201ENST00000423442 ITGB7P26010 798 aa9.38□□□□□ -0.91
LINC00458-201ENST00000423442 NOS2P35228 1153 aa9.38□□□□□ -0.91
LINC00458-201ENST00000423442 SYT9Q86SS6 491 aa9.38□□□□□ -0.91
LINC00458-201ENST00000423442 TNS4Q8IZW8 715 aa9.38□□□□□ -0.91
LINC00458-201ENST00000423442 DEPDC4Q8N2C3 294 aa9.38□□□□□ -0.91
LINC00458-201ENST00000423442 EPHA4P54764 986 aa9.37□□□□□ -0.91
LINC00458-201ENST00000423442 LAMC2Q13753 1193 aa9.37□□□□□ -0.91
LINC00458-201ENST00000423442 TEAD4Q15561 434 aa9.37□□□□□ -0.91
LINC00458-201ENST00000423442 LMTK3Q96Q04 1460 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 WDR7Q9Y4E6 1490 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 ELOA3CA0A087WX78 387 aaPredicted RBP9.36□□□□□ -0.91
LINC00458-201ENST00000423442 ELOA3DA6NLF2 546 aaPredicted RBP9.36□□□□□ -0.91
LINC00458-201ENST00000423442 ELOA3BQ3SY89 546 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 SH3PXD2AQ5TCZ1 1133 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 SLC9A9Q8IVB4 645 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 ELOA3Q8NG57 546 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 C7orf43Q8WVR3 580 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 PSMG3-AS1Q96PY0 264 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 ZNF232Q9UNY5 417 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 CD109Q6YHK3 1445 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 MAGI3Q5TCQ9 1506 aa9.36□□□□□ -0.91
LINC00458-201ENST00000423442 EML1O00423 815 aa9.35□□□□□ -0.91
LINC00458-201ENST00000423442 MDFIQ99750 246 aa9.35□□□□□ -0.91
LINC00458-201ENST00000423442 SEMA6BQ9H3T3 888 aa9.35□□□□□ -0.91
LINC00458-201ENST00000423442 CFAP43Q8NDM7 1665 aa9.35□□□□□ -0.91
LINC00458-201ENST00000423442 PTPRMP28827 1452 aa9.34□□□□□ -0.91
LINC00458-201ENST00000423442 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
LINC00458-201ENST00000423442 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
LINC00458-201ENST00000423442 ALAS2P22557 587 aa9.34□□□□□ -0.91
LINC00458-201ENST00000423442 SFSWAPQ12872 951 aaKnown RBP9.34□□□□□ -0.91
LINC00458-201ENST00000423442 NFATC2IPQ8NCF5 419 aa9.34□□□□□ -0.91
LINC00458-201ENST00000423442 POM121Q96HA1 1249 aa9.34□□□□□ -0.91
LINC00458-201ENST00000423442 SLC30A3Q99726 388 aa9.34□□□□□ -0.91
LINC00458-201ENST00000423442 SPATA31C1P0DKV0 1188 aa9.33□□□□□ -0.92
LINC00458-201ENST00000423442 GATA4P43694 442 aa9.33□□□□□ -0.92
LINC00458-201ENST00000423442 NEUROD4Q9HD90 331 aa9.33□□□□□ -0.92
LINC00458-201ENST00000423442 ADAMTSL3P82987 1691 aa9.32□□□□□ -0.92
LINC00458-201ENST00000423442 UGGT2Q9NYU1 1516 aa9.32□□□□□ -0.92
LINC00458-201ENST00000423442 KIAA0556O60303 1618 aa9.32□□□□□ -0.92
LINC00458-201ENST00000423442 FAM9AQ8IZU1 332 aaPredicted RBP9.32□□□□□ -0.92
LINC00458-201ENST00000423442 KIAA1024Q9UPX6 916 aa9.32□□□□□ -0.92
LINC00458-201ENST00000423442 SERTM1A2A2V5 107 aa9.31□□□□□ -0.92
LINC00458-201ENST00000423442 SIN3BO75182 1162 aa9.31□□□□□ -0.92
LINC00458-201ENST00000423442 RAB44Q7Z6P3 723 aaPredicted RBP9.31□□□□□ -0.92
LINC00458-201ENST00000423442 STARD13Q9Y3M8 1113 aa9.31□□□□□ -0.92
LINC00458-201ENST00000423442 PCF11O94913 1555 aaKnown RBP9.3□□□□□ -0.92
LINC00458-201ENST00000423442 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
LINC00458-201ENST00000423442 FAM229AH3BQW9 127 aa9.3□□□□□ -0.92
LINC00458-201ENST00000423442 M0R082 166 aa9.3□□□□□ -0.92
LINC00458-201ENST00000423442 ZBTB7BO15156 539 aaPredicted RBP9.3□□□□□ -0.92
LINC00458-201ENST00000423442 COL9A3Q14050 684 aaPredicted RBP9.3□□□□□ -0.92
LINC00458-201ENST00000423442 C8orf86Q6ZUL3 223 aa9.3□□□□□ -0.92
LINC00458-201ENST00000423442 ILDR2Q71H61 639 aa9.3□□□□□ -0.92
LINC00458-201ENST00000423442 TPCN2Q8NHX9 752 aa9.3□□□□□ -0.92
LINC00458-201ENST00000423442 ZNF417Q8TAU3 575 aa9.3□□□□□ -0.92
LINC00458-201ENST00000423442 RHPN1Q8TCX5 695 aa9.3□□□□□ -0.92
LINC00458-201ENST00000423442 ZNF587Q96SQ5 575 aaPredicted RBP9.3□□□□□ -0.92
LINC00458-201ENST00000423442 KRTAP9-2Q9BYQ4 174 aa9.3□□□□□ -0.92
LINC00458-201ENST00000423442 ADARB2-AS1A8MUL3 147 aa9.29□□□□□ -0.92
LINC00458-201ENST00000423442 HSH2DQ96JZ2 352 aa9.29□□□□□ -0.92
LINC00458-201ENST00000423442 TSPAN10Q9H1Z9 355 aaPredicted RBP9.29□□□□□ -0.92
LINC00458-201ENST00000423442 HCN4Q9Y3Q4 1203 aa9.29□□□□□ -0.92
LINC00458-201ENST00000423442 ARAP3Q8WWN8 1544 aa9.29□□□□□ -0.92
LINC00458-201ENST00000423442 POM121CA8CG34 1229 aa9.28□□□□□ -0.92
LINC00458-201ENST00000423442 ALBP02768 609 aa9.28□□□□□ -0.92
LINC00458-201ENST00000423442 CLDN10P78369 228 aa9.28□□□□□ -0.92
LINC00458-201ENST00000423442 SPEM2Q0P670 501 aa9.28□□□□□ -0.92
LINC00458-201ENST00000423442 ADAMTS19Q8TE59 1207 aa9.28□□□□□ -0.92
LINC00458-201ENST00000423442 GPC6Q9Y625 555 aaPredicted RBP9.28□□□□□ -0.92
LINC00458-201ENST00000423442 MADDQ8WXG6 1647 aa9.27□□□□□ -0.92
LINC00458-201ENST00000423442 HSPA2P54652 639 aa9.27□□□□□ -0.93
LINC00458-201ENST00000423442 PRRT3Q5FWE3 981 aa9.27□□□□□ -0.93
LINC00458-201ENST00000423442 CCDC102BQ68D86 513 aa9.27□□□□□ -0.93
LINC00458-201ENST00000423442 TRIM50Q86XT4 487 aa9.27□□□□□ -0.93
LINC00458-201ENST00000423442 TNFRSF25Q93038 417 aa9.27□□□□□ -0.93
LINC00458-201ENST00000423442 CEP63Q96MT8 703 aa9.27□□□□□ -0.93
LINC00458-201ENST00000423442 BCORL1Q5H9F3 1711 aa9.27□□□□□ -0.93
LINC00458-201ENST00000423442 ABCA8O94911 1581 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 USP17L3A6NCW0 530 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 USP17L4A6NCW7 530 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 SPDYE3A6NKU9 549 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 RAPGEF3O95398 923 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 ADH7P40394 386 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 RSPO4Q2I0M5 234 aaPredicted RBP9.26□□□□□ -0.93
LINC00458-201ENST00000423442 USP17L2Q6R6M4 530 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 USP17L1Q7RTZ2 530 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 WWC1Q8IX03 1113 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 MICALL1Q8N3F8 863 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 ZNF280CQ8ND82 737 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 BRD7Q9NPI1 651 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 RAPGEF2Q9Y4G8 1499 aa9.26□□□□□ -0.93
LINC00458-201ENST00000423442 ARID4BQ4LE39 1312 aaPredicted RBP9.26□□□□□ -0.93
LINC00458-201ENST00000423442 DISP3Q9P2K9 1392 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms