RNA–Protein interactions for RNA: ENST00000423311.1

LINC01399-201, Transcript of long intergenic non-protein coding RNA 1399, humanhuman

TSL 3 BASIC

Gene LINC01399, Length 648 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01399-201ENST00000423311 ZPR1O75312 459 aa11.35□□□□□ -0.59
LINC01399-201ENST00000423311 PCCAP05165 728 aaPredicted RBP11.35□□□□□ -0.59
LINC01399-201ENST00000423311 CASP7P55210 303 aa11.35□□□□□ -0.59
LINC01399-201ENST00000423311 SF3B2Q13435 895 aaKnown RBP11.35□□□□□ -0.59
LINC01399-201ENST00000423311 TRAPPC3LQ5T215 181 aa11.35□□□□□ -0.59
LINC01399-201ENST00000423311 NLRP10Q86W26 655 aa11.35□□□□□ -0.59
LINC01399-201ENST00000423311 ZBTB38Q8NAP3 1195 aaPredicted RBP11.35□□□□□ -0.59
LINC01399-201ENST00000423311 DCTPP1Q9H773 170 aa11.35□□□□□ -0.59
LINC01399-201ENST00000423311 CDHR2Q9BYE9 1310 aa11.35□□□□□ -0.59
LINC01399-201ENST00000423311 RFC4P35249 363 aa11.34□□□□□ -0.59
LINC01399-201ENST00000423311 POLA2Q14181 598 aa11.34□□□□□ -0.59
LINC01399-201ENST00000423311 UBE3BQ7Z3V4 1068 aa11.34□□□□□ -0.59
LINC01399-201ENST00000423311 PELP1Q8IZL8 1130 aaKnown RBP11.34□□□□□ -0.59
LINC01399-201ENST00000423311 FLAD1Q8NFF5 587 aa11.34□□□□□ -0.59
LINC01399-201ENST00000423311 SSH3Q8TE77 659 aa11.34□□□□□ -0.59
LINC01399-201ENST00000423311 ARHGEF1Q92888 912 aaKnown RBP11.34□□□□□ -0.59
LINC01399-201ENST00000423311 CAMKK2Q96RR4 588 aa11.34□□□□□ -0.59
LINC01399-201ENST00000423311 USP42Q9H9J4 1324 aaKnown RBP11.34□□□□□ -0.59
LINC01399-201ENST00000423311 HSP90B1P14625 803 aaKnown RBP11.33□□□□□ -0.6
LINC01399-201ENST00000423311 BAG6P46379 1132 aa11.33□□□□□ -0.6
LINC01399-201ENST00000423311 RABL6Q3YEC7 729 aaPredicted RBP11.33□□□□□ -0.6
LINC01399-201ENST00000423311 PPP1R42Q7Z4L9 355 aa11.33□□□□□ -0.6
LINC01399-201ENST00000423311 AKT1S1Q96B36 256 aa11.33□□□□□ -0.6
LINC01399-201ENST00000423311 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
LINC01399-201ENST00000423311 SUCLG2Q96I99 432 aa11.33□□□□□ -0.6
LINC01399-201ENST00000423311 PLA2G12BQ9BX93 195 aa11.33□□□□□ -0.6
LINC01399-201ENST00000423311 UBN2Q6ZU65 1347 aa11.33□□□□□ -0.6
LINC01399-201ENST00000423311 DDX60Q8IY21 1712 aaKnown RBP11.32□□□□□ -0.6
LINC01399-201ENST00000423311 CASZ1Q86V15 1759 aa11.32□□□□□ -0.6
LINC01399-201ENST00000423311 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.32□□□□□ -0.6
LINC01399-201ENST00000423311 PNMA6EA0A0J9YXQ4 647 aa11.32□□□□□ -0.6
LINC01399-201ENST00000423311 SRGAP3O43295 1099 aa11.32□□□□□ -0.6
LINC01399-201ENST00000423311 GPTP24298 496 aa11.32□□□□□ -0.6
LINC01399-201ENST00000423311 BICC1Q9H694 974 aaKnown RBP11.32□□□□□ -0.6
LINC01399-201ENST00000423311 NIP7Q9Y221 180 aaKnown RBP eCLIP11.32□□□□□ -0.6
LINC01399-201ENST00000423311 FOXO4P98177 505 aa11.31□□□□□ -0.6
LINC01399-201ENST00000423311 NUCB1Q02818 461 aa11.31□□□□□ -0.6
LINC01399-201ENST00000423311 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
LINC01399-201ENST00000423311 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
LINC01399-201ENST00000423311 AMIGO3Q86WK7 504 aa11.31□□□□□ -0.6
LINC01399-201ENST00000423311 UTP14AQ9BVJ6 771 aaKnown RBP11.31□□□□□ -0.6
LINC01399-201ENST00000423311 BCL2L12Q9HB09 334 aa11.31□□□□□ -0.6
LINC01399-201ENST00000423311 TFCP2L1Q9NZI6 479 aa11.31□□□□□ -0.6
LINC01399-201ENST00000423311 TRMT112Q9UI30 125 aaKnown RBP11.31□□□□□ -0.6
LINC01399-201ENST00000423311 SH3TC1Q8TE82 1336 aa11.31□□□□□ -0.6
LINC01399-201ENST00000423311 FAM89AQ96GI7 184 aa11.3□□□□□ -0.6
LINC01399-201ENST00000423311 SETDB2Q96T68 719 aa11.3□□□□□ -0.6
LINC01399-201ENST00000423311 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
LINC01399-201ENST00000423311 NOP58Q9Y2X3 529 aaKnown RBP11.3□□□□□ -0.6
LINC01399-201ENST00000423311 PDE8AO60658 829 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 RAB11FIP3O75154 756 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 PHF14O94880 888 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 NTSR2O95665 410 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 CSF1RP07333 972 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 EN1Q05925 392 aaPredicted RBP11.29□□□□□ -0.6
LINC01399-201ENST00000423311 EZH2Q15910 746 aaKnown RBP11.29□□□□□ -0.6
LINC01399-201ENST00000423311 EPHA10Q5JZY3 1008 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 SUSD4Q5VX71 490 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 CHD1LQ86WJ1 897 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 SRP68Q9UHB9 627 aaKnown RBP11.29□□□□□ -0.6
LINC01399-201ENST00000423311 PDZRN3Q9UPQ7 1066 aa11.29□□□□□ -0.6
LINC01399-201ENST00000423311 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
LINC01399-201ENST00000423311 IRS4O14654 1257 aaPredicted RBP11.28□□□□□ -0.6
LINC01399-201ENST00000423311 GYS1P13807 737 aa11.28□□□□□ -0.6
LINC01399-201ENST00000423311 ZNF827Q17R98 1081 aa11.28□□□□□ -0.6
LINC01399-201ENST00000423311 TBC1D9BQ66K14 1250 aa11.28□□□□□ -0.6
LINC01399-201ENST00000423311 LMBR1LQ6UX01 489 aa11.28□□□□□ -0.6
LINC01399-201ENST00000423311 ERC1Q8IUD2 1116 aa11.28□□□□□ -0.6
LINC01399-201ENST00000423311 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
LINC01399-201ENST00000423311 ZBTB47Q9UFB7 747 aaPredicted RBP11.28□□□□□ -0.6
LINC01399-201ENST00000423311 RIC1Q4ADV7 1423 aa11.27□□□□□ -0.6
LINC01399-201ENST00000423311 SURF6O75683 361 aaKnown RBP11.27□□□□□ -0.61
LINC01399-201ENST00000423311 SLC15A2Q16348 729 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.61
LINC01399-201ENST00000423311 SLC10A5Q5PT55 438 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 ANKRD45Q5TZF3 282 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 TPTE2Q6XPS3 522 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 SMIM5Q71RC9 77 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 NLGN1Q8N2Q7 840 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 JARID2Q92833 1246 aaPredicted RBP11.27□□□□□ -0.61
LINC01399-201ENST00000423311 LRRCC1Q9C099 1032 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 STK32BQ9NY57 414 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
LINC01399-201ENST00000423311 NRXN2Q9P2S2 1712 aa11.26□□□□□ -0.61
LINC01399-201ENST00000423311 RFX5P48382 616 aaPredicted RBP11.26□□□□□ -0.61
LINC01399-201ENST00000423311 CTSWP56202 376 aa11.26□□□□□ -0.61
LINC01399-201ENST00000423311 NBPF5PQ86XG9 351 aaPredicted RBP11.26□□□□□ -0.61
LINC01399-201ENST00000423311 TTLL11Q8NHH1 800 aa11.26□□□□□ -0.61
LINC01399-201ENST00000423311 KIF1BPQ96EK5 621 aa11.26□□□□□ -0.61
LINC01399-201ENST00000423311 EXOC6BQ9Y2D4 811 aa11.26□□□□□ -0.61
LINC01399-201ENST00000423311 PNPLA7Q6ZV29 1317 aa11.26□□□□□ -0.61
LINC01399-201ENST00000423311 RTL9Q8NET4 1388 aa11.26□□□□□ -0.61
LINC01399-201ENST00000423311 TM4SF1P30408 202 aa11.25□□□□□ -0.61
LINC01399-201ENST00000423311 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
LINC01399-201ENST00000423311 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
LINC01399-201ENST00000423311 NFIXQ14938 502 aa11.25□□□□□ -0.61
LINC01399-201ENST00000423311 CCDC57Q2TAC2 916 aa11.25□□□□□ -0.61
LINC01399-201ENST00000423311 COL23A1Q86Y22 540 aaPredicted RBP11.25□□□□□ -0.61
LINC01399-201ENST00000423311 SYNE4Q8N205 404 aa11.25□□□□□ -0.61
LINC01399-201ENST00000423311 CIAO1O76071 339 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms