RNA–Protein interactions for RNA: ENST00000423275.5

RAF1-203, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 2,354 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-203ENST00000423275 RUFY3Q7L099 469 aa22.52■■□□□ 1.2
RAF1-203ENST00000423275 NAP1L5Q96NT1 182 aaPredicted RBP22.52■■□□□ 1.2
RAF1-203ENST00000423275 RPAP1Q9BWH6 1393 aaPredicted RBP22.52■■□□□ 1.2
RAF1-203ENST00000423275 EVI5LQ96CN4 794 aa22.52■■□□□ 1.19
RAF1-203ENST00000423275 WDR33Q9C0J8 1336 aaKnown RBP22.51■■□□□ 1.19
RAF1-203ENST00000423275 MRC1P22897 1456 aa22.51■■□□□ 1.19
RAF1-203ENST00000423275 CASTP20810 708 aaKnown RBP22.5■■□□□ 1.19
RAF1-203ENST00000423275 ADCK5Q3MIX3 580 aa22.5■■□□□ 1.19
RAF1-203ENST00000423275 FAM227BQ96M60 508 aa22.5■■□□□ 1.19
RAF1-203ENST00000423275 FMNL2Q96PY5 1086 aa22.5■■□□□ 1.19
RAF1-203ENST00000423275 RUFY2Q8WXA3 655 aa22.5■■□□□ 1.19
RAF1-203ENST00000423275 GADD45BO75293 160 aaPredicted RBP22.49■■□□□ 1.19
RAF1-203ENST00000423275 CABP4P57796 275 aa22.49■■□□□ 1.19
RAF1-203ENST00000423275 PRPF40BQ6NWY9 871 aaKnown RBP22.49■■□□□ 1.19
RAF1-203ENST00000423275 BOLA2Q9H3K6 86 aa22.49■■□□□ 1.19
RAF1-203ENST00000423275 TCHHQ07283 1943 aa22.49■■□□□ 1.19
RAF1-203ENST00000423275 ATP5J2-PTCD1G3V325 749 aa22.49■■□□□ 1.19
RAF1-203ENST00000423275 PTCD1O75127 700 aaKnown RBP22.49■■□□□ 1.19
RAF1-203ENST00000423275 LIMCH1Q9UPQ0 1083 aa22.49■■□□□ 1.19
RAF1-203ENST00000423275 ABCC6O95255 1503 aa22.48■■□□□ 1.19
RAF1-203ENST00000423275 LARGE1O95461 756 aa22.48■■□□□ 1.19
RAF1-203ENST00000423275 DDX54Q8TDD1 881 aaKnown RBP22.48■■□□□ 1.19
RAF1-203ENST00000423275 PKD1L3Q7Z443 1732 aa22.47■■□□□ 1.19
RAF1-203ENST00000423275 DTNBO60941 627 aa22.47■■□□□ 1.19
RAF1-203ENST00000423275 NMIQ13287 307 aaPredicted RBP22.47■■□□□ 1.19
RAF1-203ENST00000423275 UBE3BQ7Z3V4 1068 aa22.47■■□□□ 1.19
RAF1-203ENST00000423275 USP48Q86UV5 1035 aa22.47■■□□□ 1.19
RAF1-203ENST00000423275 CPDO75976 1380 aa22.47■■□□□ 1.19
RAF1-203ENST00000423275 RFX5P48382 616 aaPredicted RBP22.46■■□□□ 1.19
RAF1-203ENST00000423275 COL9A3Q14050 684 aaPredicted RBP22.46■■□□□ 1.19
RAF1-203ENST00000423275 NECTIN1Q15223 517 aa22.46■■□□□ 1.19
RAF1-203ENST00000423275 ZSCAN30Q86W11 494 aa22.46■■□□□ 1.19
RAF1-203ENST00000423275 PDLIM2Q96JY6 352 aa22.46■■□□□ 1.19
RAF1-203ENST00000423275 JAKMIP1Q96N16 626 aaKnown RBP22.46■■□□□ 1.19
RAF1-203ENST00000423275 CCDC171Q6TFL3 1326 aa22.46■■□□□ 1.19
RAF1-203ENST00000423275 BRINP3Q76B58 766 aa22.45■■□□□ 1.18
RAF1-203ENST00000423275 EDC3Q96F86 508 aaKnown RBP22.45■■□□□ 1.18
RAF1-203ENST00000423275 GLI3P10071 1580 aa22.45■■□□□ 1.18
RAF1-203ENST00000423275 A0A0D9SFI3 127 aa22.45■■□□□ 1.18
RAF1-203ENST00000423275 PTPN12Q05209 780 aaKnown RBP22.45■■□□□ 1.18
RAF1-203ENST00000423275 RNF214Q8ND24 703 aa22.45■■□□□ 1.18
RAF1-203ENST00000423275 KCNB2Q92953 911 aa22.45■■□□□ 1.18
RAF1-203ENST00000423275 SYT1P21579 422 aa22.44■■□□□ 1.18
RAF1-203ENST00000423275 RBM8AQ9Y5S9 174 aaKnown RBP22.44■■□□□ 1.18
RAF1-203ENST00000423275 STRCQ7RTU9 1775 aa22.44■■□□□ 1.18
RAF1-203ENST00000423275 ZSCAN22P10073 491 aaPredicted RBP22.43■■□□□ 1.18
RAF1-203ENST00000423275 COPRSQ9NQ92 184 aa22.43■■□□□ 1.18
RAF1-203ENST00000423275 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.43■■□□□ 1.18
RAF1-203ENST00000423275 A0A087WZG4 1122 aa22.43■■□□□ 1.18
RAF1-203ENST00000423275 NBPF26B4DH59 902 aa22.43■■□□□ 1.18
RAF1-203ENST00000423275 NBPF14Q5TI25 921 aa22.43■■□□□ 1.18
RAF1-203ENST00000423275 NBPF10Q6P3W6 841 aaKnown RBP22.43■■□□□ 1.18
RAF1-203ENST00000423275 NBPF15Q8N660 670 aa22.43■■□□□ 1.18
RAF1-203ENST00000423275 CNPY2Q9Y2B0 182 aa22.43■■□□□ 1.18
RAF1-203ENST00000423275 STX6O43752 255 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 CCDC83Q8IWF9 413 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 FSD1Q9BTV5 496 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 ZSWIM6Q9HCJ5 1215 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 PDRG1Q9NUG6 133 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 SMC3Q9UQE7 1217 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 AFDNP55196 1824 aaKnown RBP22.42■■□□□ 1.18
RAF1-203ENST00000423275 CASP7P55210 303 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 TFCP2Q12800 502 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 MAP4K1Q92918 833 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 DBNLQ9UJU6 430 aaKnown RBP22.42■■□□□ 1.18
RAF1-203ENST00000423275 ARFGEF2Q9Y6D5 1785 aa22.42■■□□□ 1.18
RAF1-203ENST00000423275 RABL6Q3YEC7 729 aaPredicted RBP22.41■■□□□ 1.18
RAF1-203ENST00000423275 VPS53Q5VIR6 699 aa22.41■■□□□ 1.18
RAF1-203ENST00000423275 CREB3L3Q68CJ9 461 aa22.41■■□□□ 1.18
RAF1-203ENST00000423275 NDUFB9Q9Y6M9 179 aa22.41■■□□□ 1.18
RAF1-203ENST00000423275 TPRNQ4KMQ1 711 aa22.41■■□□□ 1.18
RAF1-203ENST00000423275 PLBD2Q8NHP8 589 aa22.41■■□□□ 1.18
RAF1-203ENST00000423275 PRDM11Q9NQV5 511 aa22.41■■□□□ 1.18
RAF1-203ENST00000423275 TAF6LQ9Y6J9 622 aa22.41■■□□□ 1.18
RAF1-203ENST00000423275 TOM1L2Q6ZVM7 507 aa22.4■■□□□ 1.18
RAF1-203ENST00000423275 SYAP1Q96A49 352 aaPredicted RBP22.4■■□□□ 1.18
RAF1-203ENST00000423275 CYP46A1Q9Y6A2 500 aa22.4■■□□□ 1.18
RAF1-203ENST00000423275 PLEKHG2Q9H7P9 1386 aa22.4■■□□□ 1.18
RAF1-203ENST00000423275 XIRP1Q702N8 1843 aaKnown RBP22.4■■□□□ 1.18
RAF1-203ENST00000423275 TNNI3KQ59H18 835 aa22.4■■□□□ 1.18
RAF1-203ENST00000423275 ZNF589Q86UQ0 364 aaPredicted RBP22.4■■□□□ 1.18
RAF1-203ENST00000423275 TM6SF1Q9BZW5 370 aa22.4■■□□□ 1.18
RAF1-203ENST00000423275 FPGT-TNNI3KV9GXZ4 949 aa22.4■■□□□ 1.18
RAF1-203ENST00000423275 WDR17Q8IZU2 1322 aa22.39■■□□□ 1.18
RAF1-203ENST00000423275 HIP1O00291 1037 aa22.39■■□□□ 1.18
RAF1-203ENST00000423275 TTLL7Q6ZT98 887 aa22.39■■□□□ 1.18
RAF1-203ENST00000423275 TMEM87AQ8NBN3 555 aa22.39■■□□□ 1.18
RAF1-203ENST00000423275 ZCRB1Q8TBF4 217 aaKnown RBP22.39■■□□□ 1.18
RAF1-203ENST00000423275 TSPY26PQ9H489 355 aa22.39■■□□□ 1.18
RAF1-203ENST00000423275 SNRKQ9NRH2 765 aa22.39■■□□□ 1.18
RAF1-203ENST00000423275 F13A1P00488 732 aa22.39■■□□□ 1.17
RAF1-203ENST00000423275 CHGBP05060 677 aa22.39■■□□□ 1.17
RAF1-203ENST00000423275 MSNP26038 577 aaKnown RBP22.39■■□□□ 1.17
RAF1-203ENST00000423275 GJB2P29033 226 aa22.39■■□□□ 1.17
RAF1-203ENST00000423275 KCNJ4P48050 445 aa22.39■■□□□ 1.17
RAF1-203ENST00000423275 ST3GAL1Q11201 340 aa22.39■■□□□ 1.17
RAF1-203ENST00000423275 SLC27A2O14975 620 aa22.38■■□□□ 1.17
RAF1-203ENST00000423275 A1BGP04217 495 aa22.38■■□□□ 1.17
RAF1-203ENST00000423275 ZKSCAN1P17029 563 aaPredicted RBP22.38■■□□□ 1.17
RAF1-203ENST00000423275 MED23Q9ULK4 1368 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms