RNA–Protein interactions for RNA: ENST00000422887.1

ECHDC3-203, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-203ENST00000422887 CHD4Q14839 1912 aa12.65□□□□□ -0.38
ECHDC3-203ENST00000422887 PPP1R42Q7Z4L9 355 aa12.65□□□□□ -0.38
ECHDC3-203ENST00000422887 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
ECHDC3-203ENST00000422887 LINS1Q8NG48 757 aa12.65□□□□□ -0.38
ECHDC3-203ENST00000422887 MYD88Q99836 296 aa12.65□□□□□ -0.38
ECHDC3-203ENST00000422887 FER1L6Q2WGJ9 1857 aa12.65□□□□□ -0.38
ECHDC3-203ENST00000422887 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
ECHDC3-203ENST00000422887 ABCC4O15439 1325 aa12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 UBN2Q6ZU65 1347 aa12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 POLRMTO00411 1230 aaKnown RBP12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 ALDH1L1O75891 902 aa12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 TRIM27P14373 513 aa12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 CCT4P50991 539 aaKnown RBP12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 NLRP10Q86W26 655 aa12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 FRAT1Q92837 279 aaPredicted RBP12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 CWC25Q9NXE8 425 aaPredicted RBP12.64□□□□□ -0.39
ECHDC3-203ENST00000422887 LTBP1Q14766 1721 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 SLX4Q8IY92 1834 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 NEURL1BA8MQ27 555 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 F6X3S4 739 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 SERPINB2P05120 415 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 CENPBP07199 599 aaPredicted RBP12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 HSP90B1P14625 803 aaKnown RBP12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 GPTP24298 496 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 BEND3Q5T5X7 828 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 TPTE2Q6XPS3 522 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 BICDL1Q6ZP65 573 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 NBPF5PQ86XG9 351 aaPredicted RBP12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 FTSJ3Q8IY81 847 aaKnown RBP12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 CNBD1Q8NA66 436 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 SRCIN1Q9C0H9 1055 aa12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
ECHDC3-203ENST00000422887 DICER1Q9UPY3 1922 aaKnown RBP12.62□□□□□ -0.39
ECHDC3-203ENST00000422887 NPHP1O15259 732 aa12.62□□□□□ -0.39
ECHDC3-203ENST00000422887 IGKV5-2P06315 115 aa12.62□□□□□ -0.39
ECHDC3-203ENST00000422887 ST5P78524 1137 aa12.62□□□□□ -0.39
ECHDC3-203ENST00000422887 SLC4A10Q6U841 1118 aa12.62□□□□□ -0.39
ECHDC3-203ENST00000422887 UTP14AQ9BVJ6 771 aaKnown RBP12.62□□□□□ -0.39
ECHDC3-203ENST00000422887 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
ECHDC3-203ENST00000422887 ATP5J2-PTCD1G3V325 749 aa12.61□□□□□ -0.39
ECHDC3-203ENST00000422887 NTSR2O95665 410 aa12.61□□□□□ -0.39
ECHDC3-203ENST00000422887 SUSD4Q5VX71 490 aa12.61□□□□□ -0.39
ECHDC3-203ENST00000422887 DZIP1LQ8IYY4 767 aaKnown RBP12.61□□□□□ -0.39
ECHDC3-203ENST00000422887 ZBTB38Q8NAP3 1195 aaPredicted RBP12.61□□□□□ -0.39
ECHDC3-203ENST00000422887 PCCAP05165 728 aaPredicted RBP12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 GTF2E1P29083 439 aaPredicted RBP12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 RRP1P56182 461 aaKnown RBP12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 GCKRQ14397 625 aa12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 PDE3AQ14432 1141 aa12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 CWF19L2Q2TBE0 894 aaKnown RBP12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 INTS3Q68E01 1043 aaKnown RBP12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 PRR5LQ6MZQ0 368 aa12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 TRMT112Q9UI30 125 aaKnown RBP12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 CDHR2Q9BYE9 1310 aa12.6□□□□□ -0.39
ECHDC3-203ENST00000422887 ABCC12Q96J65 1359 aa12.59□□□□□ -0.39
ECHDC3-203ENST00000422887 GRM8O00222 908 aa12.59□□□□□ -0.39
ECHDC3-203ENST00000422887 HDAC5Q9UQL6 1122 aa12.59□□□□□ -0.39
ECHDC3-203ENST00000422887 BRIP1Q9BX63 1249 aa12.58□□□□□ -0.4
ECHDC3-203ENST00000422887 CHMP4BQ9H444 224 aaKnown RBP12.58□□□□□ -0.4
ECHDC3-203ENST00000422887 C9orf78Q9NZ63 289 aaPredicted RBP12.58□□□□□ -0.4
ECHDC3-203ENST00000422887 PPP1R1BQ9UD71 204 aaPredicted RBP12.58□□□□□ -0.4
ECHDC3-203ENST00000422887 CD2APQ9Y5K6 639 aa12.58□□□□□ -0.4
ECHDC3-203ENST00000422887 UTYO14607 1347 aa12.58□□□□□ -0.4
ECHDC3-203ENST00000422887 ZNF646O15015 1829 aaPredicted RBP12.58□□□□□ -0.4
ECHDC3-203ENST00000422887 FAM177BA6PVY3 158 aa12.57□□□□□ -0.4
ECHDC3-203ENST00000422887 H7C1W4 665 aa12.57□□□□□ -0.4
ECHDC3-203ENST00000422887 PDE6BP35913 854 aa12.57□□□□□ -0.4
ECHDC3-203ENST00000422887 SLC10A5Q5PT55 438 aa12.57□□□□□ -0.4
ECHDC3-203ENST00000422887 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
ECHDC3-203ENST00000422887 SNED1Q8TER0 1413 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 KLRG2A4D1S0 409 aaPredicted RBP12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 GNAI3P08754 354 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 TGFB2P61812 414 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 ERFEQ4G0M1 354 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 UBE3BQ7Z3V4 1068 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 NUTM1Q86Y26 1132 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 TMEM57Q8N5G2 664 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 FAM89AQ96GI7 184 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 DDX19BQ9UMR2 479 aa12.56□□□□□ -0.4
ECHDC3-203ENST00000422887 PDE8AO60658 829 aa12.55□□□□□ -0.4
ECHDC3-203ENST00000422887 MVPQ14764 893 aaKnown RBP12.55□□□□□ -0.4
ECHDC3-203ENST00000422887 ITPRIPQ8IWB1 547 aa12.55□□□□□ -0.4
ECHDC3-203ENST00000422887 NLRP3Q96P20 1036 aa12.55□□□□□ -0.4
ECHDC3-203ENST00000422887 PSME4Q14997 1843 aa12.55□□□□□ -0.4
ECHDC3-203ENST00000422887 PLIN1O60240 522 aa12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 UBTFL1P0CB47 393 aaPredicted RBP12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 RLBP1P12271 317 aa12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 CASP7P55210 303 aa12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 CRY2Q49AN0 593 aa12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 PANK1Q8TE04 598 aa12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 USP44Q9H0E7 712 aa12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 TNNQ9UQP3 1299 aa12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 RTL9Q8NET4 1388 aa12.54□□□□□ -0.4
ECHDC3-203ENST00000422887 NBPF7P0C2Y1 421 aaPredicted RBP12.53□□□□□ -0.4
ECHDC3-203ENST00000422887 CTSWP56202 376 aa12.53□□□□□ -0.4
ECHDC3-203ENST00000422887 SF3B3Q15393 1217 aaKnown RBP12.53□□□□□ -0.4
ECHDC3-203ENST00000422887 FHDC1Q9C0D6 1143 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms