RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 NUP188Q5SRE5 1749 aa16.68■□□□□ 0.26
CDCA3-202ENST00000422785 HIP1O00291 1037 aa16.68■□□□□ 0.26
CDCA3-202ENST00000422785 A1BGP04217 495 aa16.68■□□□□ 0.26
CDCA3-202ENST00000422785 INTS4Q96HW7 963 aaKnown RBP16.68■□□□□ 0.26
CDCA3-202ENST00000422785 UPF3BQ9BZI7 483 aaKnown RBP16.68■□□□□ 0.26
CDCA3-202ENST00000422785 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
CDCA3-202ENST00000422785 SNX14Q9Y5W7 946 aa16.68■□□□□ 0.26
CDCA3-202ENST00000422785 H7C1W4 665 aa16.67■□□□□ 0.26
CDCA3-202ENST00000422785 TTLL7Q6ZT98 887 aa16.67■□□□□ 0.26
CDCA3-202ENST00000422785 FSD2A1L4K1 749 aa16.67■□□□□ 0.26
CDCA3-202ENST00000422785 PKP1Q13835 747 aa16.66■□□□□ 0.26
CDCA3-202ENST00000422785 TOGARAM1Q9Y4F4 1720 aa16.66■□□□□ 0.26
CDCA3-202ENST00000422785 CWC25Q9NXE8 425 aaPredicted RBP16.66■□□□□ 0.26
CDCA3-202ENST00000422785 TMOD3Q9NYL9 352 aa16.66■□□□□ 0.26
CDCA3-202ENST00000422785 GOLGA6L3A6NEY3 463 aa16.66■□□□□ 0.26
CDCA3-202ENST00000422785 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
CDCA3-202ENST00000422785 ZDHHC9Q9Y397 364 aa16.65■□□□□ 0.26
CDCA3-202ENST00000422785 FOXO4P98177 505 aa16.65■□□□□ 0.26
CDCA3-202ENST00000422785 TNNI3KQ59H18 835 aa16.65■□□□□ 0.26
CDCA3-202ENST00000422785 SNRKQ9NRH2 765 aa16.65■□□□□ 0.26
CDCA3-202ENST00000422785 BTG4Q9NY30 223 aa16.65■□□□□ 0.26
CDCA3-202ENST00000422785 BRPF3Q9ULD4 1205 aa16.65■□□□□ 0.26
CDCA3-202ENST00000422785 FPGT-TNNI3KV9GXZ4 949 aa16.65■□□□□ 0.26
CDCA3-202ENST00000422785 TFCP2Q12800 502 aa16.64■□□□□ 0.25
CDCA3-202ENST00000422785 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
CDCA3-202ENST00000422785 CCDC191Q8NCU4 936 aa16.64■□□□□ 0.25
CDCA3-202ENST00000422785 BOLA2Q9H3K6 86 aa16.64■□□□□ 0.25
CDCA3-202ENST00000422785 PTH1RQ03431 593 aa16.64■□□□□ 0.25
CDCA3-202ENST00000422785 KCNB2Q92953 911 aa16.64■□□□□ 0.25
CDCA3-202ENST00000422785 ATP5JP18859 108 aa16.63■□□□□ 0.25
CDCA3-202ENST00000422785 TTC14Q96N46 770 aa16.63■□□□□ 0.25
CDCA3-202ENST00000422785 TJP1Q07157 1748 aa16.63■□□□□ 0.25
CDCA3-202ENST00000422785 NOL8Q76FK4 1167 aaKnown RBP16.63■□□□□ 0.25
CDCA3-202ENST00000422785 VSIG10Q8N0Z9 540 aa16.63■□□□□ 0.25
CDCA3-202ENST00000422785 TEX13AQ9BXU3 409 aaPredicted RBP16.63■□□□□ 0.25
CDCA3-202ENST00000422785 DBNLQ9UJU6 430 aaKnown RBP16.63■□□□□ 0.25
CDCA3-202ENST00000422785 CCDC171Q6TFL3 1326 aa16.62■□□□□ 0.25
CDCA3-202ENST00000422785 NMIQ13287 307 aaPredicted RBP16.62■□□□□ 0.25
CDCA3-202ENST00000422785 FSD1Q9BTV5 496 aa16.62■□□□□ 0.25
CDCA3-202ENST00000422785 ZBTB3Q9H5J0 574 aa16.62■□□□□ 0.25
CDCA3-202ENST00000422785 ISY1Q9ULR0 285 aaKnown RBP16.62■□□□□ 0.25
CDCA3-202ENST00000422785 COL14A1Q05707 1796 aaKnown RBP16.62■□□□□ 0.25
CDCA3-202ENST00000422785 FAM227BQ96M60 508 aa16.62■□□□□ 0.25
CDCA3-202ENST00000422785 MCTP1Q6DN14 999 aa16.61■□□□□ 0.25
CDCA3-202ENST00000422785 PIGBQ92521 554 aa16.61■□□□□ 0.25
CDCA3-202ENST00000422785 NECTIN1Q15223 517 aa16.61■□□□□ 0.25
CDCA3-202ENST00000422785 KLHL40Q2TBA0 621 aa16.61■□□□□ 0.25
CDCA3-202ENST00000422785 TM6SF1Q9BZW5 370 aa16.61■□□□□ 0.25
CDCA3-202ENST00000422785 DISP2A7MBM2 1401 aa16.61■□□□□ 0.25
CDCA3-202ENST00000422785 MAP4K1Q92918 833 aa16.6■□□□□ 0.25
CDCA3-202ENST00000422785 BRD1O95696 1058 aa16.6■□□□□ 0.25
CDCA3-202ENST00000422785 PRPF40BQ6NWY9 871 aaKnown RBP16.6■□□□□ 0.25
CDCA3-202ENST00000422785 ASAP1Q9ULH1 1129 aa16.6■□□□□ 0.25
CDCA3-202ENST00000422785 ISCA1Q9BUE6 129 aa16.6■□□□□ 0.25
CDCA3-202ENST00000422785 CHMP3Q9Y3E7 222 aa16.6■□□□□ 0.25
CDCA3-202ENST00000422785 CASTP20810 708 aaKnown RBP16.59■□□□□ 0.25
CDCA3-202ENST00000422785 AK2P54819 239 aa16.59■□□□□ 0.25
CDCA3-202ENST00000422785 LMBRD1Q9NUN5 540 aa16.59■□□□□ 0.25
CDCA3-202ENST00000422785 LIMCH1Q9UPQ0 1083 aa16.59■□□□□ 0.25
CDCA3-202ENST00000422785 DDX49Q9Y6V7 483 aaKnown RBP16.59■□□□□ 0.25
CDCA3-202ENST00000422785 A0A0D9SFI3 127 aa16.59■□□□□ 0.25
CDCA3-202ENST00000422785 XRCC6P12956 609 aaKnown RBP eCLIP16.59■□□□□ 0.25
CDCA3-202ENST00000422785 ATG9AQ7Z3C6 839 aa16.59■□□□□ 0.25
CDCA3-202ENST00000422785 ATG3Q9NT62 314 aa16.59■□□□□ 0.25
CDCA3-202ENST00000422785 RBM8AQ9Y5S9 174 aaKnown RBP16.59■□□□□ 0.25
CDCA3-202ENST00000422785 MED23Q9ULK4 1368 aa16.59■□□□□ 0.25
CDCA3-202ENST00000422785 ZKSCAN1P17029 563 aaPredicted RBP16.58■□□□□ 0.25
CDCA3-202ENST00000422785 TRIM28Q13263 835 aaKnown RBP16.58■□□□□ 0.25
CDCA3-202ENST00000422785 TCIRG1Q13488 830 aa16.58■□□□□ 0.25
CDCA3-202ENST00000422785 DBNDD2Q9BQY9 259 aa16.58■□□□□ 0.25
CDCA3-202ENST00000422785 ZSWIM6Q9HCJ5 1215 aa16.58■□□□□ 0.25
CDCA3-202ENST00000422785 GPR108Q9NPR9 543 aa16.58■□□□□ 0.25
CDCA3-202ENST00000422785 RFX7Q2KHR2 1363 aa16.58■□□□□ 0.24
CDCA3-202ENST00000422785 ROBO1Q9Y6N7 1651 aa16.58■□□□□ 0.24
CDCA3-202ENST00000422785 STARD3NLO95772 234 aa16.58■□□□□ 0.24
CDCA3-202ENST00000422785 MRE11P49959 708 aa16.58■□□□□ 0.24
CDCA3-202ENST00000422785 VPS53Q5VIR6 699 aa16.58■□□□□ 0.24
CDCA3-202ENST00000422785 RUFY3Q7L099 469 aa16.58■□□□□ 0.24
CDCA3-202ENST00000422785 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.24
CDCA3-202ENST00000422785 ITGB4P16144 1822 aa16.58■□□□□ 0.24
CDCA3-202ENST00000422785 COL22A1Q8NFW1 1626 aaPredicted RBP16.58■□□□□ 0.24
CDCA3-202ENST00000422785 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
CDCA3-202ENST00000422785 AHDC1Q5TGY3 1603 aaPredicted RBP16.57■□□□□ 0.24
CDCA3-202ENST00000422785 JCADQ9P266 1359 aa16.57■□□□□ 0.24
CDCA3-202ENST00000422785 ADCK5Q3MIX3 580 aa16.57■□□□□ 0.24
CDCA3-202ENST00000422785 CREB3L3Q68CJ9 461 aa16.57■□□□□ 0.24
CDCA3-202ENST00000422785 JAKMIP1Q96N16 626 aaKnown RBP16.57■□□□□ 0.24
CDCA3-202ENST00000422785 HAUS7Q99871 368 aa16.57■□□□□ 0.24
CDCA3-202ENST00000422785 CYP46A1Q9Y6A2 500 aa16.57■□□□□ 0.24
CDCA3-202ENST00000422785 PLCH1Q4KWH8 1693 aa16.57■□□□□ 0.24
CDCA3-202ENST00000422785 KCNJ4P48050 445 aa16.56■□□□□ 0.24
CDCA3-202ENST00000422785 LRP6O75581 1613 aa16.56■□□□□ 0.24
CDCA3-202ENST00000422785 KIF6Q6ZMV9 814 aa16.56■□□□□ 0.24
CDCA3-202ENST00000422785 EDC3Q96F86 508 aaKnown RBP16.56■□□□□ 0.24
CDCA3-202ENST00000422785 PDRG1Q9NUG6 133 aa16.56■□□□□ 0.24
CDCA3-202ENST00000422785 BCL9O00512 1426 aa16.55■□□□□ 0.24
CDCA3-202ENST00000422785 EYA2O00167 538 aa16.55■□□□□ 0.24
CDCA3-202ENST00000422785 CIAO1O76071 339 aa16.55■□□□□ 0.24
CDCA3-202ENST00000422785 COL16A1Q07092 1604 aaPredicted RBP16.55■□□□□ 0.24
CDCA3-202ENST00000422785 SLC27A2O14975 620 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms