RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 TTLL6Q8N841 843 aa12.4□□□□□ -0.42
HERC3-204ENST00000422770 UTP14AQ9BVJ6 771 aaKnown RBP12.4□□□□□ -0.42
HERC3-204ENST00000422770 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
HERC3-204ENST00000422770 RTL5Q5HYW3 569 aaPredicted RBP12.39□□□□□ -0.43
HERC3-204ENST00000422770 RPGRQ92834 1020 aaKnown RBP12.39□□□□□ -0.43
HERC3-204ENST00000422770 MYD88Q99836 296 aa12.39□□□□□ -0.43
HERC3-204ENST00000422770 TRMT112Q9UI30 125 aaKnown RBP12.39□□□□□ -0.43
HERC3-204ENST00000422770 PDZRN3Q9UPQ7 1066 aa12.39□□□□□ -0.43
HERC3-204ENST00000422770 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
HERC3-204ENST00000422770 E9PSI1 815 aa12.38□□□□□ -0.43
HERC3-204ENST00000422770 NTSR2O95665 410 aa12.38□□□□□ -0.43
HERC3-204ENST00000422770 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
HERC3-204ENST00000422770 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
HERC3-204ENST00000422770 MAP3K2Q9Y2U5 619 aa12.38□□□□□ -0.43
HERC3-204ENST00000422770 IBTKQ9P2D0 1353 aaPredicted RBP12.38□□□□□ -0.43
HERC3-204ENST00000422770 SBF1O95248 1867 aa12.38□□□□□ -0.43
HERC3-204ENST00000422770 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
HERC3-204ENST00000422770 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
HERC3-204ENST00000422770 ZNF784Q8NCA9 323 aaPredicted RBP12.37□□□□□ -0.43
HERC3-204ENST00000422770 CNKSR1Q969H4 720 aa12.37□□□□□ -0.43
HERC3-204ENST00000422770 CDCA7LQ96GN5 454 aa12.37□□□□□ -0.43
HERC3-204ENST00000422770 TAF1P21675 1872 aa12.37□□□□□ -0.43
HERC3-204ENST00000422770 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
HERC3-204ENST00000422770 C21orf2O43822 256 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 VAMP4O75379 141 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 SRGNP10124 158 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 HCLS1P14317 486 aaPredicted RBP12.36□□□□□ -0.43
HERC3-204ENST00000422770 NPR1P16066 1061 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 NEXNQ0ZGT2 675 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 STYK1Q6J9G0 422 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 PRPF40BQ6NWY9 871 aaKnown RBP12.36□□□□□ -0.43
HERC3-204ENST00000422770 G2E3Q7L622 706 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 MYH3P11055 1940 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 SH3TC1Q8TE82 1336 aa12.36□□□□□ -0.43
HERC3-204ENST00000422770 SPEF2Q9C093 1822 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 RASSF7Q02833 373 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 FLIIQ13045 1269 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 KSR2Q6VAB6 950 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 SYNE4Q8N205 404 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 ZNF526Q8TF50 670 aaPredicted RBP12.35□□□□□ -0.43
HERC3-204ENST00000422770 FAM89AQ96GI7 184 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 NLRP3Q96P20 1036 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 FER1L6Q2WGJ9 1857 aa12.35□□□□□ -0.43
HERC3-204ENST00000422770 CENPBP07199 599 aaPredicted RBP12.34□□□□□ -0.43
HERC3-204ENST00000422770 SLFN5Q08AF3 891 aa12.34□□□□□ -0.43
HERC3-204ENST00000422770 RBM17Q96I25 401 aaKnown RBP12.34□□□□□ -0.43
HERC3-204ENST00000422770 ISCA1Q9BUE6 129 aa12.34□□□□□ -0.43
HERC3-204ENST00000422770 METTL22Q9BUU2 404 aaPredicted RBP12.34□□□□□ -0.43
HERC3-204ENST00000422770 CWC25Q9NXE8 425 aaPredicted RBP12.34□□□□□ -0.43
HERC3-204ENST00000422770 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
HERC3-204ENST00000422770 ADCY9O60503 1353 aa12.33□□□□□ -0.44
HERC3-204ENST00000422770 ALDH1B1P30837 517 aa12.33□□□□□ -0.44
HERC3-204ENST00000422770 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
HERC3-204ENST00000422770 JARID2Q92833 1246 aaPredicted RBP12.33□□□□□ -0.44
HERC3-204ENST00000422770 BCL2L13Q9BXK5 485 aa12.33□□□□□ -0.44
HERC3-204ENST00000422770 RNF181Q9P0P0 153 aa12.33□□□□□ -0.44
HERC3-204ENST00000422770 RIC1Q4ADV7 1423 aa12.33□□□□□ -0.44
HERC3-204ENST00000422770 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
HERC3-204ENST00000422770 CWF19L2Q2TBE0 894 aaKnown RBP12.32□□□□□ -0.44
HERC3-204ENST00000422770 C9orf131Q5VYM1 1079 aa12.32□□□□□ -0.44
HERC3-204ENST00000422770 TMX4Q9H1E5 349 aaPredicted RBP12.32□□□□□ -0.44
HERC3-204ENST00000422770 GOLGB1Q14789 3259 aaKnown RBP12.32□□□□□ -0.44
HERC3-204ENST00000422770 F6X3S4 739 aa12.31□□□□□ -0.44
HERC3-204ENST00000422770 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
HERC3-204ENST00000422770 CCDC93Q567U6 631 aa12.31□□□□□ -0.44
HERC3-204ENST00000422770 SOGA3Q5TF21 947 aa12.31□□□□□ -0.44
HERC3-204ENST00000422770 SLC4A10Q6U841 1118 aa12.31□□□□□ -0.44
HERC3-204ENST00000422770 OLFM4Q6UX06 510 aa12.31□□□□□ -0.44
HERC3-204ENST00000422770 DDX46Q7L014 1031 aaKnown RBP12.31□□□□□ -0.44
HERC3-204ENST00000422770 CCDC191Q8NCU4 936 aa12.31□□□□□ -0.44
HERC3-204ENST00000422770 DNAAF4Q8WXU2 420 aa12.31□□□□□ -0.44
HERC3-204ENST00000422770 SMC4Q9NTJ3 1288 aa12.31□□□□□ -0.44
HERC3-204ENST00000422770 KLRG2A4D1S0 409 aaPredicted RBP12.3□□□□□ -0.44
HERC3-204ENST00000422770 PPEF1O14829 653 aaPredicted RBP12.3□□□□□ -0.44
HERC3-204ENST00000422770 CRY2Q49AN0 593 aa12.3□□□□□ -0.44
HERC3-204ENST00000422770 CCDC85AQ96PX6 553 aaPredicted RBP12.3□□□□□ -0.44
HERC3-204ENST00000422770 TAOK3Q9H2K8 898 aa12.3□□□□□ -0.44
HERC3-204ENST00000422770 NEURL1BA8MQ27 555 aa12.29□□□□□ -0.44
HERC3-204ENST00000422770 PCCAP05165 728 aaPredicted RBP12.29□□□□□ -0.44
HERC3-204ENST00000422770 HSP90B1P14625 803 aaKnown RBP12.29□□□□□ -0.44
HERC3-204ENST00000422770 SLC10A5Q5PT55 438 aa12.29□□□□□ -0.44
HERC3-204ENST00000422770 UBE3BQ7Z3V4 1068 aa12.29□□□□□ -0.44
HERC3-204ENST00000422770 ZBTB38Q8NAP3 1195 aaPredicted RBP12.29□□□□□ -0.44
HERC3-204ENST00000422770 ABCC4O15439 1325 aa12.29□□□□□ -0.44
HERC3-204ENST00000422770 NFKBIEO00221 500 aa12.28□□□□□ -0.44
HERC3-204ENST00000422770 IGKV5-2P06315 115 aa12.28□□□□□ -0.44
HERC3-204ENST00000422770 LMNB1P20700 586 aa12.28□□□□□ -0.44
HERC3-204ENST00000422770 TRIM28Q13263 835 aaKnown RBP12.28□□□□□ -0.44
HERC3-204ENST00000422770 SSH1Q8WYL5 1049 aa12.28□□□□□ -0.44
HERC3-204ENST00000422770 CRAMP1Q96RY5 1269 aa12.28□□□□□ -0.44
HERC3-204ENST00000422770 GPBP1L1Q9HC44 474 aaPredicted RBP12.28□□□□□ -0.44
HERC3-204ENST00000422770 HOXA10P31260 410 aaPredicted RBP12.27□□□□□ -0.45
HERC3-204ENST00000422770 RTKN2Q8IZC4 609 aa12.27□□□□□ -0.45
HERC3-204ENST00000422770 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.45
HERC3-204ENST00000422770 PDE8AO60658 829 aa12.26□□□□□ -0.45
HERC3-204ENST00000422770 C1QTNF8P60827 252 aa12.26□□□□□ -0.45
HERC3-204ENST00000422770 GRAPQ13588 217 aa12.26□□□□□ -0.45
HERC3-204ENST00000422770 GCKRQ14397 625 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms