RNA–Protein interactions for RNA: ENST00000422190.6

ATP2C1-203, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-203ENST00000422190 ZKSCAN1P17029 563 aaPredicted RBP7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 TFCP2Q12800 502 aa7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 BRINP3Q76B58 766 aa7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 LRP10Q7Z4F1 713 aa7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 ZCRB1Q8TBF4 217 aaKnown RBP7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 PDRG1Q9NUG6 133 aa7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 ZNF330Q9Y3S2 320 aaPredicted RBP7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 RBM8AQ9Y5S9 174 aaKnown RBP7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 CCDC171Q6TFL3 1326 aa7.59□□□□□ -1.19
ATP2C1-203ENST00000422190 A1BGP04217 495 aa7.59□□□□□ -1.2
ATP2C1-203ENST00000422190 CCDC83Q8IWF9 413 aa7.59□□□□□ -1.2
ATP2C1-203ENST00000422190 ANP32BQ92688 251 aaKnown RBP7.59□□□□□ -1.2
ATP2C1-203ENST00000422190 TMEM63CQ9P1W3 806 aa7.59□□□□□ -1.2
ATP2C1-203ENST00000422190 SMC3Q9UQE7 1217 aa7.59□□□□□ -1.2
ATP2C1-203ENST00000422190 TUBGCP6Q96RT7 1819 aa7.59□□□□□ -1.2
ATP2C1-203ENST00000422190 WDR33Q9C0J8 1336 aaKnown RBP7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 A0A0D9SFI3 127 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 LARGE1O95461 756 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 PRIM1P49642 420 aaKnown RBP7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 PTPN12Q05209 780 aaKnown RBP7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 LMBR1LQ6UX01 489 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 TTLL7Q6ZT98 887 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 CYP46A1Q9Y6A2 500 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 SYCE3A1L190 88 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 NBPF26B4DH59 902 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 HIP1O00291 1037 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 ZNF445P59923 1031 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 NBPF14Q5TI25 921 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 CREB3L3Q68CJ9 461 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 NBPF10Q6P3W6 841 aaKnown RBP7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 NBPF15Q8N660 670 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 TCEANC2Q96MN5 208 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 DNAJC2Q99543 621 aaKnown RBP7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 ZBTB3Q9H5J0 574 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 COPRSQ9NQ92 184 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 ALS2Q96Q42 1657 aa7.58□□□□□ -1.2
ATP2C1-203ENST00000422190 PLBD2Q8NHP8 589 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 DBNLQ9UJU6 430 aaKnown RBP7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 RFX5P48382 616 aaPredicted RBP7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 EVA1CP58658 441 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 NECTIN1Q15223 517 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 TNNI3KQ59H18 835 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 NECAB1Q8N987 351 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 DBNDD2Q9BQY9 259 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 RBSNQ9H1K0 784 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 FPGT-TNNI3KV9GXZ4 949 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 CAMTA1Q9Y6Y1 1673 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 DCCP43146 1447 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 GADD45BO75293 160 aaPredicted RBP7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 MBD3O95983 291 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 SYT1P21579 422 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 COL9A3Q14050 684 aaPredicted RBP7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 ZNF589Q86UQ0 364 aaPredicted RBP7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 NEUROD6Q96NK8 337 aa7.57□□□□□ -1.2
ATP2C1-203ENST00000422190 WDR17Q8IZU2 1322 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 SLC27A2O14975 620 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 STX6O43752 255 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 CHGBP05060 677 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 VPS53Q5VIR6 699 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 USP48Q86UV5 1035 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 MAP4K1Q92918 833 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 ZSWIM6Q9HCJ5 1215 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 SLAIN2Q9P270 581 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 PCDH11XQ9BZA7 1347 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 PCDH11YQ9BZA8 1340 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 GJB2P29033 226 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 ANO8Q9HCE9 1232 aaPredicted RBP7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 CNPY2Q9Y2B0 182 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 TAF6LQ9Y6J9 622 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 SIPA1L3O60292 1781 aaPredicted RBP7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 CPDO75976 1380 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 ESPNB1AK53 854 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 ZSCAN22P10073 491 aaPredicted RBP7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 IL2RBP14784 551 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 ME3Q16798 604 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 RABL6Q3YEC7 729 aaPredicted RBP7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 RNF20Q5VTR2 975 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 DDX46Q7L014 1031 aaKnown RBP7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 TM6SF1Q9BZW5 370 aa7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 CWC25Q9NXE8 425 aaPredicted RBP7.56□□□□□ -1.2
ATP2C1-203ENST00000422190 RPAP1Q9BWH6 1393 aaPredicted RBP7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 SCN11AQ9UI33 1791 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 VPS37CA5D8V6 355 aaPredicted RBP7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 FIBPO43427 364 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 ATP5JP18859 108 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 CCDC173Q0VFZ6 552 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 BLOC1S2Q6QNY1 142 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 CCDC129Q6ZRS4 1044 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 ZSCAN31Q96LW9 406 aaPredicted RBP7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 SEC62Q99442 399 aaKnown RBP7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 C5P01031 1676 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 PSMA5P28066 241 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 CASP7P55210 303 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 TIMM10P62072 90 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 SH2B1Q9NRF2 756 aaPredicted RBP7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 STRCP1A6NGW2 1772 aa7.55□□□□□ -1.2
ATP2C1-203ENST00000422190 ADAMTS7Q9UKP4 1686 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms