RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 SLC52A1Q9NWF4 448 aa6.45□□□□□ -1.38
SCG2-202ENST00000421386 MKL2Q9ULH7 1088 aa6.45□□□□□ -1.38
SCG2-202ENST00000421386 NOL7Q9UMY1 257 aaKnown RBP6.45□□□□□ -1.38
SCG2-202ENST00000421386 RAD50Q92878 1312 aa6.45□□□□□ -1.38
SCG2-202ENST00000421386 CFAP65Q6ZU64 1925 aaKnown RBP6.44□□□□□ -1.38
SCG2-202ENST00000421386 MYOM3Q5VTT5 1437 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 FGFR3P22607 806 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 CHRNA4P43681 627 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 HSP90AB3PQ58FF7 597 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 TMEM214Q6NUQ4 689 aaKnown RBP6.44□□□□□ -1.38
SCG2-202ENST00000421386 PHTF2Q8N3S3 785 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 CALCOCO1Q9P1Z2 691 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 CGNQ9P2M7 1197 aaKnown RBP6.44□□□□□ -1.38
SCG2-202ENST00000421386 KLF15Q9UIH9 416 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 ATXN7L1Q9ULK2 861 aaPredicted RBP6.44□□□□□ -1.38
SCG2-202ENST00000421386 CCNB3Q8WWL7 1395 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 RAB3GAP2Q9H2M9 1393 aa6.44□□□□□ -1.38
SCG2-202ENST00000421386 SETD5Q9C0A6 1442 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 C1QTNF9BB2RNN3 333 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 BMP4P12644 408 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 ATP4AP20648 1035 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 C8orf34Q49A92 452 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 SLCO4C1Q6ZQN7 724 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 CD163Q86VB7 1156 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 EGFL6Q8IUX8 553 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 GOLGA6L1Q8N7Z2 621 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 MYRIPQ8NFW9 859 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 POLR3GLQ9BT43 218 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 PRKRIP1Q9H875 184 aaPredicted RBP6.43□□□□□ -1.38
SCG2-202ENST00000421386 BRMS1Q9HCU9 246 aa6.43□□□□□ -1.38
SCG2-202ENST00000421386 GDF2Q9UK05 429 aaPredicted RBP6.43□□□□□ -1.38
SCG2-202ENST00000421386 R3HCC1Q9Y3T6 440 aaKnown RBP6.43□□□□□ -1.38
SCG2-202ENST00000421386 KIAA1107Q9UPP5 1409 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 PATL2C9JE40 543 aaKnown RBP6.42□□□□□ -1.38
SCG2-202ENST00000421386 HSP90AB1P08238 724 aaKnown RBP6.42□□□□□ -1.38
SCG2-202ENST00000421386 EPXP11678 715 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 DGKGP49619 791 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 SCNN1DP51172 638 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 PDE3BQ13370 1112 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 IRF5Q13568 498 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 GNASQ5JWF2 1037 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 CENPQQ7L2Z9 268 aaPredicted RBP6.42□□□□□ -1.38
SCG2-202ENST00000421386 PDCL2Q8N4E4 241 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 BTBD6Q96KE9 485 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 CRISPLD1Q9H336 500 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 RAI14Q9P0K7 980 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 TBC1D2BQ9UPU7 963 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 INSRP06213 1382 aa6.42□□□□□ -1.38
SCG2-202ENST00000421386 SCRIBQ14160 1630 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 NEURL1BA8MQ27 555 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 PLA2G4AP47712 749 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 KCNJ4P48050 445 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 SATB1Q01826 763 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 NBPF11Q86T75 865 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 ZNF295-AS1Q8N0V1 137 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 RHBDD1Q8TEB9 315 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 PUS7Q96PZ0 661 aaKnown RBP6.41□□□□□ -1.38
SCG2-202ENST00000421386 MYCBPQ99417 103 aaPredicted RBP6.41□□□□□ -1.38
SCG2-202ENST00000421386 ESF1Q9H501 851 aaKnown RBP6.41□□□□□ -1.38
SCG2-202ENST00000421386 MRS2Q9HD23 443 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 RBM28Q9NW13 759 aaKnown RBP6.41□□□□□ -1.38
SCG2-202ENST00000421386 PHF24Q9UPV7 400 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 USP3Q9Y6I4 520 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 KDM2BQ8NHM5 1336 aa6.41□□□□□ -1.38
SCG2-202ENST00000421386 POLR1AO95602 1720 aaPredicted RBP6.41□□□□□ -1.38
SCG2-202ENST00000421386 MAP3K1Q13233 1512 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 ZMYM4Q5VZL5 1548 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 KIF1CO43896 1103 aaKnown RBP6.4□□□□□ -1.38
SCG2-202ENST00000421386 MYCP01106 439 aaPredicted RBP6.4□□□□□ -1.38
SCG2-202ENST00000421386 CSB-PGBD3P0DP91 1061 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 AMPD1P23109 780 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 LMOD3Q0VAK6 560 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 LBRQ14739 615 aaKnown RBP6.4□□□□□ -1.38
SCG2-202ENST00000421386 TLR1Q15399 786 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 RNF135Q8IUD6 432 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 PGBD3Q8N328 593 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 TMC1Q8TDI8 760 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 NCAPGQ9BPX3 1015 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 ZCCHC2Q9C0B9 1178 aaKnown RBP6.4□□□□□ -1.38
SCG2-202ENST00000421386 BSDC1Q9NW68 430 aaPredicted RBP6.4□□□□□ -1.38
SCG2-202ENST00000421386 OGFRQ9NZT2 677 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 CHMP5Q9NZZ3 219 aa6.4□□□□□ -1.38
SCG2-202ENST00000421386 ZNF330Q9Y3S2 320 aaPredicted RBP6.4□□□□□ -1.38
SCG2-202ENST00000421386 ABCC8Q09428 1581 aa6.4□□□□□ -1.39
SCG2-202ENST00000421386 TTC36A6NLP5 189 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 UBTFP17480 764 aaKnown RBP6.39□□□□□ -1.39
SCG2-202ENST00000421386 SYCP1Q15431 976 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 ZNF771Q7L3S4 317 aaPredicted RBP6.39□□□□□ -1.39
SCG2-202ENST00000421386 FCHSD1Q86WN1 690 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCG2-202ENST00000421386 EXOC6Q8TAG9 804 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 PDLIM2Q96JY6 352 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 DOLKQ9UPQ8 538 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 CEP83Q9Y592 693 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 ARHGAP31Q2M1Z3 1444 aa6.39□□□□□ -1.39
SCG2-202ENST00000421386 DCDC2BA2VCK2 349 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.38□□□□□ -1.39
SCG2-202ENST00000421386 GNB5O14775 395 aa6.38□□□□□ -1.39
SCG2-202ENST00000421386 CD33P20138 364 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms