RNA–Protein interactions for RNA: ENST00000420940.6

WDR48-203, Transcript of WD repeat domain 48, humanhuman

TSL 1 (best)

Gene WDR48, Length 3,772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR48-203ENST00000420940 CCDC30Q5VVM6 783 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 RHPN1Q8TCX5 695 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 COL14A1Q05707 1796 aaKnown RBP7.04□□□□□ -1.28
WDR48-203ENST00000420940 NEDD4P46934 1319 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 ANAPC15P60006 121 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 PA2G4Q9UQ80 394 aaKnown RBP7.04□□□□□ -1.28
WDR48-203ENST00000420940 AHDC1Q5TGY3 1603 aaPredicted RBP7.04□□□□□ -1.28
WDR48-203ENST00000420940 SPATA31A3Q5VYP0 1347 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 NUTM1Q86Y26 1132 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 EAF2Q96CJ1 260 aaPredicted RBP7.04□□□□□ -1.28
WDR48-203ENST00000420940 LRRCC1Q9C099 1032 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 RIC1Q4ADV7 1423 aa7.04□□□□□ -1.28
WDR48-203ENST00000420940 CDK5RAP2Q96SN8 1893 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 NASPP49321 788 aaPredicted RBP7.03□□□□□ -1.28
WDR48-203ENST00000420940 FOXO4P98177 505 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 IL1RAPL2Q9NP60 686 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 TPM2P07951 284 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 ESCO1Q5FWF5 840 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 CHMP4BQ9H444 224 aaKnown RBP7.03□□□□□ -1.28
WDR48-203ENST00000420940 SLC52A2Q9HAB3 445 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 CACNA1SQ13698 1873 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 CPA1P15085 419 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 HDGFL1Q5TGJ6 251 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 KLHDC4Q8TBB5 520 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 SPTLC3Q9NUV7 552 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 HYPKQ9NX55 129 aa7.03□□□□□ -1.28
WDR48-203ENST00000420940 RBM27Q9P2N5 1060 aaKnown RBP7.03□□□□□ -1.28
WDR48-203ENST00000420940 TAF1LQ8IZX4 1826 aa7.02□□□□□ -1.28
WDR48-203ENST00000420940 SOS2Q07890 1332 aaPredicted RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 ERC2O15083 957 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 NUCB2P80303 420 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 ZNF710Q8N1W2 664 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 LTV1Q96GA3 475 aaPredicted RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 SLC4A9Q96Q91 983 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 ZKSCAN5Q9Y2L8 839 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 USP16Q9Y5T5 823 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 NEURL1BA8MQ27 555 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 GADD45BO75293 160 aaPredicted RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 FKBP5Q13451 457 aaPredicted RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 SLC4A10Q6U841 1118 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 ATG9AQ7Z3C6 839 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 ZNF589Q86UQ0 364 aaPredicted RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 DNAAF4Q8WXU2 420 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 RNF39Q9H2S5 420 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 BICC1Q9H694 974 aaKnown RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 MAP3K2Q9Y2U5 619 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 DDX60LQ5H9U9 1706 aaKnown RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 SLC39A6Q13433 755 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 NKX1-1Q15270 411 aaPredicted RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 SLFNL1Q499Z3 407 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 USPL1Q5W0Q7 1092 aa7.02□□□□□ -1.29
WDR48-203ENST00000420940 ZNF496Q96IT1 587 aaPredicted RBP7.02□□□□□ -1.29
WDR48-203ENST00000420940 MAP4K4O95819 1239 aaPredicted RBP7.01□□□□□ -1.29
WDR48-203ENST00000420940 PTPN12Q05209 780 aaKnown RBP7.01□□□□□ -1.29
WDR48-203ENST00000420940 ZNF790Q6PG37 636 aa7.01□□□□□ -1.29
WDR48-203ENST00000420940 BTBD11A6QL63 1104 aa7.01□□□□□ -1.29
WDR48-203ENST00000420940 APBB1O00213 710 aa7.01□□□□□ -1.29
WDR48-203ENST00000420940 MCM5P33992 734 aa7.01□□□□□ -1.29
WDR48-203ENST00000420940 KCNH5Q8NCM2 988 aa7.01□□□□□ -1.29
WDR48-203ENST00000420940 LTBP1Q14766 1721 aa7□□□□□ -1.29
WDR48-203ENST00000420940 A0A0D9SFI3 127 aa7□□□□□ -1.29
WDR48-203ENST00000420940 TOB2Q14106 344 aaPredicted RBP7□□□□□ -1.29
WDR48-203ENST00000420940 KSR2Q6VAB6 950 aa7□□□□□ -1.29
WDR48-203ENST00000420940 CABLES1Q8TDN4 633 aa7□□□□□ -1.29
WDR48-203ENST00000420940 PIP4K2AP48426 406 aaPredicted RBP7□□□□□ -1.29
WDR48-203ENST00000420940 BRINP3Q76B58 766 aa7□□□□□ -1.29
WDR48-203ENST00000420940 KRT28Q7Z3Y7 464 aa7□□□□□ -1.29
WDR48-203ENST00000420940 FAM227BQ96M60 508 aa7□□□□□ -1.29
WDR48-203ENST00000420940 RBM43Q6ZSC3 357 aaKnown RBP7□□□□□ -1.29
WDR48-203ENST00000420940 PDCL3Q9H2J4 239 aa7□□□□□ -1.29
WDR48-203ENST00000420940 TNRC6CQ9HCJ0 1690 aaKnown RBP7□□□□□ -1.29
WDR48-203ENST00000420940 LY75O60449 1722 aa7□□□□□ -1.29
WDR48-203ENST00000420940 MCTP1Q6DN14 999 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 KIAA1211Q6ZU35 1233 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 STOX1Q6ZVD7 989 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 EDC3Q96F86 508 aaKnown RBP6.99□□□□□ -1.29
WDR48-203ENST00000420940 DDX21Q9NR30 783 aaKnown RBP eCLIP6.99□□□□□ -1.29
WDR48-203ENST00000420940 DBNLQ9UJU6 430 aaKnown RBP6.99□□□□□ -1.29
WDR48-203ENST00000420940 SALL1Q9NSC2 1324 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 GNAI3P08754 354 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 CAVIN1Q6NZI2 390 aaKnown RBP6.99□□□□□ -1.29
WDR48-203ENST00000420940 ZNF530Q6P9A1 599 aaPredicted RBP6.99□□□□□ -1.29
WDR48-203ENST00000420940 NFATC2IPQ8NCF5 419 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 MAP4K1Q92918 833 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 PKNOX2Q96KN3 472 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 ESF1Q9H501 851 aaKnown RBP6.99□□□□□ -1.29
WDR48-203ENST00000420940 C19orf44Q9H6X5 657 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 ZSWIM6Q9HCJ5 1215 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.99□□□□□ -1.292e-7■■■□□ 17.8
WDR48-203ENST00000420940 ADD1P35611 737 aaKnown RBP6.99□□□□□ -1.29
WDR48-203ENST00000420940 GCKRQ14397 625 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 NBPF3Q9H094 633 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 KCNF1Q9H3M0 494 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 TACC3Q9Y6A5 838 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 LAMB1P07942 1786 aa6.99□□□□□ -1.29
WDR48-203ENST00000420940 SRGAP3O43295 1099 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 AK2P54819 239 aa6.98□□□□□ -1.29
WDR48-203ENST00000420940 CACNB1Q02641 598 aaPredicted RBP6.98□□□□□ -1.29
WDR48-203ENST00000420940 TSGA10IPQ3SY00 556 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms