RNA–Protein interactions for RNA: ENST00000420720.5

RFX3-205, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-205ENST00000420720 ITGBL1O95965 494 aaPredicted RBP9.65□□□□□ -0.86
RFX3-205ENST00000420720 DDR1Q08345 913 aa9.65□□□□□ -0.86
RFX3-205ENST00000420720 DGKZQ13574 1117 aa9.65□□□□□ -0.86
RFX3-205ENST00000420720 CNGB1Q14028 1251 aaPredicted RBP9.65□□□□□ -0.86
RFX3-205ENST00000420720 DEFB115Q30KQ5 88 aa9.65□□□□□ -0.86
RFX3-205ENST00000420720 GPR153Q6NV75 609 aa9.65□□□□□ -0.86
RFX3-205ENST00000420720 SLC52A2Q9HAB3 445 aa9.65□□□□□ -0.86
RFX3-205ENST00000420720 CUL9Q8IWT3 2517 aa9.64□□□□□ -0.87
RFX3-205ENST00000420720 LMNB1P20700 586 aa9.64□□□□□ -0.87
RFX3-205ENST00000420720 CHRNA5P30532 468 aa9.64□□□□□ -0.87
RFX3-205ENST00000420720 MTHFSDQ2M296 383 aaKnown RBP9.64□□□□□ -0.87
RFX3-205ENST00000420720 CC2D1BQ5T0F9 858 aaKnown RBP9.64□□□□□ -0.87
RFX3-205ENST00000420720 USPL1Q5W0Q7 1092 aa9.64□□□□□ -0.87
RFX3-205ENST00000420720 CASP8AP2Q9UKL3 1982 aa9.64□□□□□ -0.87
RFX3-205ENST00000420720 CCDC88AQ3V6T2 1871 aa9.64□□□□□ -0.87
RFX3-205ENST00000420720 POLRMTO00411 1230 aaKnown RBP9.63□□□□□ -0.87
RFX3-205ENST00000420720 DIAPH1O60610 1272 aaKnown RBP9.63□□□□□ -0.87
RFX3-205ENST00000420720 ZPR1O75312 459 aa9.63□□□□□ -0.87
RFX3-205ENST00000420720 TM4SF1P30408 202 aa9.63□□□□□ -0.87
RFX3-205ENST00000420720 FXR1P51114 621 aaKnown RBP eCLIP9.63□□□□□ -0.87
RFX3-205ENST00000420720 VARS2Q5ST30 1063 aaKnown RBP9.63□□□□□ -0.87
RFX3-205ENST00000420720 ADAMTS7Q9UKP4 1686 aa9.62□□□□□ -0.87
RFX3-205ENST00000420720 PER1O15534 1290 aaPredicted RBP9.62□□□□□ -0.87
RFX3-205ENST00000420720 CYP19A1P11511 503 aaPredicted RBP9.62□□□□□ -0.87
RFX3-205ENST00000420720 GCC1Q96CN9 775 aa9.62□□□□□ -0.87
RFX3-205ENST00000420720 ZSWIM6Q9HCJ5 1215 aa9.62□□□□□ -0.87
RFX3-205ENST00000420720 ZBTB1Q9Y2K1 713 aa9.62□□□□□ -0.87
RFX3-205ENST00000420720 SOS1Q07889 1333 aaPredicted RBP9.61□□□□□ -0.87
RFX3-205ENST00000420720 NFKBIEO00221 500 aa9.61□□□□□ -0.87
RFX3-205ENST00000420720 RIMBP2O15034 1052 aa9.61□□□□□ -0.87
RFX3-205ENST00000420720 KHSRPQ92945 711 aaKnown RBP eCLIP9.61□□□□□ -0.87
RFX3-205ENST00000420720 NARFQ9UHQ1 456 aa9.61□□□□□ -0.87
RFX3-205ENST00000420720 ZNF831Q5JPB2 1677 aa9.61□□□□□ -0.87
RFX3-205ENST00000420720 MKI67P46013 3256 aaKnown RBP9.6□□□□□ -0.87
RFX3-205ENST00000420720 ADAMTSL1Q8N6G6 1762 aa9.6□□□□□ -0.87
RFX3-205ENST00000420720 U2SURPO15042 1029 aaKnown RBP9.6□□□□□ -0.87
RFX3-205ENST00000420720 CANXP27824 592 aaKnown RBP9.6□□□□□ -0.87
RFX3-205ENST00000420720 NFIXQ14938 502 aa9.6□□□□□ -0.87
RFX3-205ENST00000420720 LDHDQ86WU2 507 aa9.6□□□□□ -0.87
RFX3-205ENST00000420720 BCL2L12Q9HB09 334 aa9.6□□□□□ -0.87
RFX3-205ENST00000420720 COL5A3P25940 1745 aaPredicted RBP9.59□□□□□ -0.87
RFX3-205ENST00000420720 SERPINB2P05120 415 aa9.59□□□□□ -0.87
RFX3-205ENST00000420720 TTC5Q8N0Z6 440 aa9.59□□□□□ -0.87
RFX3-205ENST00000420720 VSIG10Q8N0Z9 540 aa9.59□□□□□ -0.87
RFX3-205ENST00000420720 CAPNS2Q96L46 248 aa9.59□□□□□ -0.87
RFX3-205ENST00000420720 TAOK2Q9UL54 1235 aa9.59□□□□□ -0.87
RFX3-205ENST00000420720 COL6A3P12111 3177 aa9.59□□□□□ -0.87
RFX3-205ENST00000420720 COL15A1P39059 1388 aa9.59□□□□□ -0.87
RFX3-205ENST00000420720 C2orf72A6NCS6 295 aa9.58□□□□□ -0.88
RFX3-205ENST00000420720 DDNO94850 711 aaPredicted RBP9.58□□□□□ -0.88
RFX3-205ENST00000420720 TEFQ10587 303 aa9.58□□□□□ -0.88
RFX3-205ENST00000420720 ARSIQ5FYB1 569 aa9.58□□□□□ -0.88
RFX3-205ENST00000420720 CYP4F22Q6NT55 531 aa9.58□□□□□ -0.88
RFX3-205ENST00000420720 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
RFX3-205ENST00000420720 IL17REQ8NFR9 667 aa9.58□□□□□ -0.88
RFX3-205ENST00000420720 BEGAINQ9BUH8 593 aa9.58□□□□□ -0.88
RFX3-205ENST00000420720 TJP1Q07157 1748 aa9.57□□□□□ -0.88
RFX3-205ENST00000420720 STARD3NLO95772 234 aa9.57□□□□□ -0.88
RFX3-205ENST00000420720 C2CD5Q86YS7 1000 aa9.57□□□□□ -0.88
RFX3-205ENST00000420720 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
RFX3-205ENST00000420720 ZNF496Q96IT1 587 aaPredicted RBP9.57□□□□□ -0.88
RFX3-205ENST00000420720 GPR101Q96P66 508 aaPredicted RBP9.57□□□□□ -0.88
RFX3-205ENST00000420720 ABT1Q9ULW3 272 aaKnown RBP9.57□□□□□ -0.88
RFX3-205ENST00000420720 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
RFX3-205ENST00000420720 MRC1P22897 1456 aa9.57□□□□□ -0.88
RFX3-205ENST00000420720 MYH14Q7Z406 1995 aaKnown RBP9.57□□□□□ -0.88
RFX3-205ENST00000420720 DICER1Q9UPY3 1922 aaKnown RBP9.56□□□□□ -0.88
RFX3-205ENST00000420720 GNAT3A8MTJ3 354 aa9.56□□□□□ -0.88
RFX3-205ENST00000420720 AOC2O75106 756 aa9.56□□□□□ -0.88
RFX3-205ENST00000420720 PPP1R37O75864 691 aa9.56□□□□□ -0.88
RFX3-205ENST00000420720 EIF5P55010 431 aaKnown RBP9.56□□□□□ -0.88
RFX3-205ENST00000420720 GRM1Q13255 1194 aa9.56□□□□□ -0.88
RFX3-205ENST00000420720 ZNF790Q6PG37 636 aa9.56□□□□□ -0.88
RFX3-205ENST00000420720 CCDC24Q8N4L8 307 aa9.56□□□□□ -0.88
RFX3-205ENST00000420720 TAF1DQ9H5J8 278 aaPredicted RBP9.56□□□□□ -0.88
RFX3-205ENST00000420720 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
RFX3-205ENST00000420720 DLEC1Q9Y238 1755 aa9.55□□□□□ -0.88
RFX3-205ENST00000420720 HEG1Q9ULI3 1381 aa9.55□□□□□ -0.88
RFX3-205ENST00000420720 A0A087WZG4 1122 aa9.55□□□□□ -0.88
RFX3-205ENST00000420720 H0YIN7 160 aa9.55□□□□□ -0.88
RFX3-205ENST00000420720 TBC1D9BQ66K14 1250 aa9.55□□□□□ -0.88
RFX3-205ENST00000420720 TTLL6Q8N841 843 aa9.55□□□□□ -0.88
RFX3-205ENST00000420720 TEX13AQ9BXU3 409 aaPredicted RBP9.55□□□□□ -0.88
RFX3-205ENST00000420720 PITPNM2Q9BZ72 1349 aa9.55□□□□□ -0.88
RFX3-205ENST00000420720 CARMIL3Q8ND23 1372 aa9.54□□□□□ -0.88
RFX3-205ENST00000420720 KCNQ3O43525 872 aa9.54□□□□□ -0.88
RFX3-205ENST00000420720 A1BGP04217 495 aa9.54□□□□□ -0.88
RFX3-205ENST00000420720 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
RFX3-205ENST00000420720 FMR1Q06787 632 aaKnown RBP eCLIP9.54□□□□□ -0.88
RFX3-205ENST00000420720 NBPF15Q8N660 670 aa9.54□□□□□ -0.88
RFX3-205ENST00000420720 ZNF622Q969S3 477 aaKnown RBP eCLIP9.54□□□□□ -0.88
RFX3-205ENST00000420720 PHACTR3Q96KR7 559 aa9.54□□□□□ -0.88
RFX3-205ENST00000420720 SCN4AP35499 1836 aa9.54□□□□□ -0.88
RFX3-205ENST00000420720 COL3A1P02461 1466 aaPredicted RBP9.53□□□□□ -0.88
RFX3-205ENST00000420720 NPC1L1Q9UHC9 1359 aa9.53□□□□□ -0.88
RFX3-205ENST00000420720 SCN11AQ9UI33 1791 aa9.53□□□□□ -0.88
RFX3-205ENST00000420720 BTBD11A6QL63 1104 aa9.53□□□□□ -0.88
RFX3-205ENST00000420720 IL6STP40189 918 aaPredicted RBP9.53□□□□□ -0.88
RFX3-205ENST00000420720 ERFEQ4G0M1 354 aa9.53□□□□□ -0.88
RFX3-205ENST00000420720 MAP1SQ66K74 1059 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms