RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 RGL2O15211 777 aa16.52■□□□□ 0.24
TMEM50B-201ENST00000420455 HSP90AB3PQ58FF7 597 aa16.52■□□□□ 0.24
TMEM50B-201ENST00000420455 SCN7AQ01118 1682 aa16.52■□□□□ 0.24
TMEM50B-201ENST00000420455 KAT6BQ8WYB5 2073 aa16.52■□□□□ 0.24
TMEM50B-201ENST00000420455 LAMB2P55268 1798 aa16.52■□□□□ 0.23
TMEM50B-201ENST00000420455 PCCAP05165 728 aaPredicted RBP16.51■□□□□ 0.23
TMEM50B-201ENST00000420455 CDHR2Q9BYE9 1310 aa16.51■□□□□ 0.23
TMEM50B-201ENST00000420455 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
TMEM50B-201ENST00000420455 MX1P20591 662 aa16.51■□□□□ 0.23
TMEM50B-201ENST00000420455 HLFQ16534 295 aa16.51■□□□□ 0.23
TMEM50B-201ENST00000420455 PTPN12Q05209 780 aaKnown RBP16.5■□□□□ 0.23
TMEM50B-201ENST00000420455 ZNF34Q8IZ26 560 aa16.5■□□□□ 0.23
TMEM50B-201ENST00000420455 MYH3P11055 1940 aa16.5■□□□□ 0.23
TMEM50B-201ENST00000420455 APBB1O00213 710 aa16.5■□□□□ 0.23
TMEM50B-201ENST00000420455 PTF1AQ7RTS3 328 aa16.5■□□□□ 0.23
TMEM50B-201ENST00000420455 SEPT12Q8IYM1 358 aa16.5■□□□□ 0.23
TMEM50B-201ENST00000420455 QTRT2Q9H974 415 aaKnown RBP16.5■□□□□ 0.23
TMEM50B-201ENST00000420455 SASH1O94885 1247 aa16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 RC3H1Q5TC82 1133 aaKnown RBP16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 ZBTB38Q8NAP3 1195 aaPredicted RBP16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 NLRP10Q86W26 655 aa16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 DZIP3Q86Y13 1208 aaKnown RBP16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 PA2G4Q9UQ80 394 aaKnown RBP16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 CDC45O75419 566 aa16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 SDSP20132 328 aa16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 LINC00116Q8NCU8 138 aa16.49■□□□□ 0.23
TMEM50B-201ENST00000420455 CAMTA2O94983 1202 aa16.48■□□□□ 0.23
TMEM50B-201ENST00000420455 CSF1RP07333 972 aa16.48■□□□□ 0.23
TMEM50B-201ENST00000420455 PI4K2BQ8TCG2 481 aa16.48■□□□□ 0.23
TMEM50B-201ENST00000420455 TTC41PQ6P2S7 1318 aa16.47■□□□□ 0.23
TMEM50B-201ENST00000420455 DDX60Q8IY21 1712 aaKnown RBP16.47■□□□□ 0.23
TMEM50B-201ENST00000420455 MFAP1P55081 439 aaKnown RBP16.47■□□□□ 0.23
TMEM50B-201ENST00000420455 JARID2Q92833 1246 aaPredicted RBP16.47■□□□□ 0.23
TMEM50B-201ENST00000420455 IL1RAPL2Q9NP60 686 aa16.47■□□□□ 0.23
TMEM50B-201ENST00000420455 LRP5O75197 1615 aa16.46■□□□□ 0.23
TMEM50B-201ENST00000420455 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
TMEM50B-201ENST00000420455 C4BP0C0L5 1744 aa16.46■□□□□ 0.23
TMEM50B-201ENST00000420455 COL24A1Q17RW2 1714 aa16.46■□□□□ 0.23
TMEM50B-201ENST00000420455 UBN2Q6ZU65 1347 aa16.46■□□□□ 0.23
TMEM50B-201ENST00000420455 LMBR1LQ6UX01 489 aa16.46■□□□□ 0.23
TMEM50B-201ENST00000420455 BCL11BQ9C0K0 894 aaPredicted RBP16.46■□□□□ 0.23
TMEM50B-201ENST00000420455 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.46■□□□□ 0.23
TMEM50B-201ENST00000420455 G3BP1Q13283 466 aaKnown RBP eCLIP16.45■□□□□ 0.22
TMEM50B-201ENST00000420455 RBM25P49756 843 aaKnown RBP16.45■□□□□ 0.22
TMEM50B-201ENST00000420455 AK7Q96M32 723 aa16.45■□□□□ 0.22
TMEM50B-201ENST00000420455 AK9Q5TCS8 1911 aa16.44■□□□□ 0.22
TMEM50B-201ENST00000420455 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
TMEM50B-201ENST00000420455 CLASRPQ8N2M8 674 aaKnown RBP16.44■□□□□ 0.22
TMEM50B-201ENST00000420455 C22orf23Q9BZE7 217 aa16.44■□□□□ 0.22
TMEM50B-201ENST00000420455 UPF2Q9HAU5 1272 aaKnown RBP16.44■□□□□ 0.22
TMEM50B-201ENST00000420455 CIAO1O76071 339 aa16.44■□□□□ 0.22
TMEM50B-201ENST00000420455 CLEC4GQ6UXB4 293 aa16.44■□□□□ 0.22
TMEM50B-201ENST00000420455 TBC1D2BQ9UPU7 963 aa16.44■□□□□ 0.22
TMEM50B-201ENST00000420455 C4AP0C0L4 1744 aa16.43■□□□□ 0.22
TMEM50B-201ENST00000420455 ATG9AQ7Z3C6 839 aa16.43■□□□□ 0.22
TMEM50B-201ENST00000420455 NUTM1Q86Y26 1132 aa16.43■□□□□ 0.22
TMEM50B-201ENST00000420455 A0A0G2JS52 829 aa16.43■□□□□ 0.22
TMEM50B-201ENST00000420455 MYT1Q01538 1121 aa16.43■□□□□ 0.22
TMEM50B-201ENST00000420455 KLHDC4Q8TBB5 520 aa16.43■□□□□ 0.22
TMEM50B-201ENST00000420455 ZNF330Q9Y3S2 320 aaPredicted RBP16.43■□□□□ 0.22
TMEM50B-201ENST00000420455 GPR108Q9NPR9 543 aa16.42■□□□□ 0.22
TMEM50B-201ENST00000420455 ZNF772Q68DY9 489 aaPredicted RBP16.42■□□□□ 0.22
TMEM50B-201ENST00000420455 EAF2Q96CJ1 260 aaPredicted RBP16.42■□□□□ 0.22
TMEM50B-201ENST00000420455 CASZ1Q86V15 1759 aa16.42■□□□□ 0.22
TMEM50B-201ENST00000420455 OS9Q13438 667 aaPredicted RBP16.42■□□□□ 0.22
TMEM50B-201ENST00000420455 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
TMEM50B-201ENST00000420455 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
TMEM50B-201ENST00000420455 FAM89AQ96GI7 184 aa16.41■□□□□ 0.22
TMEM50B-201ENST00000420455 FAM182BQ5T319 152 aa16.41■□□□□ 0.22
TMEM50B-201ENST00000420455 TSHZ3Q63HK5 1081 aa16.41■□□□□ 0.22
TMEM50B-201ENST00000420455 FAM196AQ6ZSG2 479 aa16.41■□□□□ 0.22
TMEM50B-201ENST00000420455 UBR3Q6ZT12 1888 aa16.4■□□□□ 0.22
TMEM50B-201ENST00000420455 NBR1Q14596 966 aa16.4■□□□□ 0.22
TMEM50B-201ENST00000420455 KIF2CQ99661 725 aa16.4■□□□□ 0.22
TMEM50B-201ENST00000420455 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
TMEM50B-201ENST00000420455 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
TMEM50B-201ENST00000420455 ECHDC1Q9NTX5 307 aa16.4■□□□□ 0.22
TMEM50B-201ENST00000420455 GLRX3O76003 335 aaKnown RBP16.39■□□□□ 0.22
TMEM50B-201ENST00000420455 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.22
TMEM50B-201ENST00000420455 KRT27Q7Z3Y8 459 aa16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 RTL9Q8NET4 1388 aa16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 GPTP24298 496 aa16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 IL15P40933 162 aaPredicted RBP16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 TNNI3KQ59H18 835 aa16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 SUSD4Q5VX71 490 aa16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 SIL1Q9H173 461 aa16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 CCNL1Q9UK58 526 aaPredicted RBP16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 FPGT-TNNI3KV9GXZ4 949 aa16.39■□□□□ 0.21
TMEM50B-201ENST00000420455 EYA2O00167 538 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 PDE8AO60658 829 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 NTSR2O95665 410 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 CTSWP56202 376 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 AACSQ86V21 672 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 RGPD3A6NKT7 1758 aaPredicted RBP16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 RGPD4Q7Z3J3 1758 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 ERC2O15083 957 aa16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 IFIT2P09913 472 aaKnown RBP16.38■□□□□ 0.21
TMEM50B-201ENST00000420455 TFCP2Q12800 502 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms