RNA–Protein interactions for RNA: ENST00000420434.7

SP140-205, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 3,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-205ENST00000420434 ATL2Q8NHH9 583 aa9.04□□□□□ -0.96
SP140-205ENST00000420434 TNPO1Q92973 898 aaKnown RBP9.04□□□□□ -0.96
SP140-205ENST00000420434 KCNQ3O43525 872 aa9.04□□□□□ -0.96
SP140-205ENST00000420434 TATP17735 454 aaPredicted RBP9.04□□□□□ -0.96
SP140-205ENST00000420434 PAX7P23759 505 aa9.04□□□□□ -0.96
SP140-205ENST00000420434 NASPP49321 788 aaPredicted RBP9.04□□□□□ -0.96
SP140-205ENST00000420434 QTRT2Q9H974 415 aaKnown RBP9.04□□□□□ -0.96
SP140-205ENST00000420434 IPO7O95373 1038 aaKnown RBP9.03□□□□□ -0.96
SP140-205ENST00000420434 LIG1P18858 919 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 KRBA2Q6ZNG9 492 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 NOL8Q76FK4 1167 aaKnown RBP9.03□□□□□ -0.96
SP140-205ENST00000420434 NFATC2IPQ8NCF5 419 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 PROCA1Q8NCQ7 364 aaPredicted RBP9.03□□□□□ -0.96
SP140-205ENST00000420434 GBP4Q96PP9 640 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 TEFQ10587 303 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 FOXD4Q12950 439 aaPredicted RBP9.03□□□□□ -0.96
SP140-205ENST00000420434 PDLIM2Q96JY6 352 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.03□□□□□ -0.96
SP140-205ENST00000420434 AFF2P51816 1311 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 SBNO1A3KN83 1393 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 ARHGEF10O15013 1369 aa9.03□□□□□ -0.96
SP140-205ENST00000420434 PDZRN3Q9UPQ7 1066 aa9.02□□□□□ -0.96
SP140-205ENST00000420434 OVOS2A0A0J9YW53 1432 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 OVOS2Q6IE36 1432 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 SSH2Q76I76 1423 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 TPD52L2O43399 206 aaKnown RBP9.02□□□□□ -0.97
SP140-205ENST00000420434 RARSP54136 660 aaKnown RBP9.02□□□□□ -0.97
SP140-205ENST00000420434 LRCH2Q5VUJ6 765 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 SMIM5Q71RC9 77 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 CACTIN-AS1Q8N1I8 211 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 NSD2O96028 1365 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 EXOSC9Q06265 439 aaKnown RBP9.02□□□□□ -0.97
SP140-205ENST00000420434 TRDNQ13061 729 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 PTF1AQ7RTS3 328 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 HSCBQ8IWL3 235 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 TSPYL6Q8N831 410 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 SNRNP27Q8WVK2 155 aaKnown RBP9.02□□□□□ -0.97
SP140-205ENST00000420434 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
SP140-205ENST00000420434 MCM5P33992 734 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 TRIM35Q9UPQ4 493 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
SP140-205ENST00000420434 PNPLA6Q8IY17 1366 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 PRAMEF22A3QJZ6 481 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 RHBDL3P58872 404 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 NFE2L2Q16236 605 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 CDC37Q16543 378 aaPredicted RBP9.01□□□□□ -0.97
SP140-205ENST00000420434 HDGFL1Q5TGJ6 251 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 ZKSCAN2Q63HK3 967 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 WDR63Q8IWG1 891 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 KCNV2Q8TDN2 545 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 PLEKHF1Q96S99 279 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 RBM42Q9BTD8 480 aaKnown RBP9.01□□□□□ -0.97
SP140-205ENST00000420434 RANBP17Q9H2T7 1088 aaKnown RBP9.01□□□□□ -0.97
SP140-205ENST00000420434 TSPYL4Q9UJ04 414 aa9.01□□□□□ -0.97
SP140-205ENST00000420434 MAP2P11137 1827 aaKnown RBP9.01□□□□□ -0.97
SP140-205ENST00000420434 EXOC5O00471 708 aa9□□□□□ -0.97
SP140-205ENST00000420434 KCNQ2O43526 872 aa9□□□□□ -0.97
SP140-205ENST00000420434 ZNF445P59923 1031 aa9□□□□□ -0.97
SP140-205ENST00000420434 PLEKHO1Q53GL0 409 aaPredicted RBP9□□□□□ -0.97
SP140-205ENST00000420434 ZNF771Q7L3S4 317 aaPredicted RBP9□□□□□ -0.97
SP140-205ENST00000420434 GET4Q7L5D6 327 aaPredicted RBP9□□□□□ -0.97
SP140-205ENST00000420434 IL17REQ8NFR9 667 aa9□□□□□ -0.97
SP140-205ENST00000420434 CXorf38Q8TB03 319 aa9□□□□□ -0.97
SP140-205ENST00000420434 IL2RBP14784 551 aa9□□□□□ -0.97
SP140-205ENST00000420434 CBX1P83916 185 aa9□□□□□ -0.97
SP140-205ENST00000420434 KLHL40Q2TBA0 621 aa9□□□□□ -0.97
SP140-205ENST00000420434 ITPRIPQ8IWB1 547 aa9□□□□□ -0.97
SP140-205ENST00000420434 ZCRB1Q8TBF4 217 aaKnown RBP9□□□□□ -0.97
SP140-205ENST00000420434 SUDS3Q9H7L9 328 aaPredicted RBP9□□□□□ -0.97
SP140-205ENST00000420434 SUFUQ9UMX1 484 aa9□□□□□ -0.97
SP140-205ENST00000420434 CYP27B1O15528 508 aa9□□□□□ -0.97
SP140-205ENST00000420434 DDB1Q16531 1140 aa9□□□□□ -0.97
SP140-205ENST00000420434 DZIP1LQ8IYY4 767 aaKnown RBP9□□□□□ -0.97
SP140-205ENST00000420434 NUCKS1Q9H1E3 243 aaKnown RBP9□□□□□ -0.97
SP140-205ENST00000420434 SYNPO2Q9UMS6 1093 aa9□□□□□ -0.97
SP140-205ENST00000420434 ROBO1Q9Y6N7 1651 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 GNAT3A8MTJ3 354 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 GSCP56915 257 aaPredicted RBP8.99□□□□□ -0.97
SP140-205ENST00000420434 BIRC2Q13490 618 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 ATP2B3Q16720 1220 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 CREBRFQ8IUR6 639 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 EVI5LQ96CN4 794 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 TNNQ9UQP3 1299 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 FMN2Q9NZ56 1722 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 PRIM1P49642 420 aaKnown RBP8.99□□□□□ -0.97
SP140-205ENST00000420434 AIMP1Q12904 312 aaKnown RBP8.99□□□□□ -0.97
SP140-205ENST00000420434 DNAJC21Q5F1R6 531 aaKnown RBP8.99□□□□□ -0.97
SP140-205ENST00000420434 RBM26Q5T8P6 1007 aaKnown RBP8.99□□□□□ -0.97
SP140-205ENST00000420434 DCCP43146 1447 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 USP31Q70CQ4 1352 aa8.99□□□□□ -0.97
SP140-205ENST00000420434 PXDNQ92626 1479 aa8.98□□□□□ -0.97
SP140-205ENST00000420434 SASS6Q6UVJ0 657 aa8.98□□□□□ -0.97
SP140-205ENST00000420434 TEX13AQ9BXU3 409 aaPredicted RBP8.98□□□□□ -0.97
SP140-205ENST00000420434 SLC24A3Q9HC58 644 aa8.98□□□□□ -0.97
SP140-205ENST00000420434 WDR17Q8IZU2 1322 aa8.98□□□□□ -0.97
SP140-205ENST00000420434 SYNRGQ9UMZ2 1314 aa8.98□□□□□ -0.97
SP140-205ENST00000420434 CABP4P57796 275 aa8.98□□□□□ -0.97
SP140-205ENST00000420434 ZKSCAN5Q9Y2L8 839 aa8.98□□□□□ -0.97
SP140-205ENST00000420434 KNDC1Q76NI1 1749 aa8.98□□□□□ -0.97
SP140-205ENST00000420434 UNC5CLQ8IV45 518 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms