RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 ELL2O00472 640 aaPredicted RBP20.58■□□□□ 0.89
NOD1-204ENST00000419601 TCIRG1Q13488 830 aa20.58■□□□□ 0.89
NOD1-204ENST00000419601 C8orf58Q8NAV2 365 aa20.58■□□□□ 0.89
NOD1-204ENST00000419601 PLBD2Q8NHP8 589 aa20.58■□□□□ 0.89
NOD1-204ENST00000419601 UTP14AQ9BVJ6 771 aaKnown RBP20.58■□□□□ 0.89
NOD1-204ENST00000419601 IL16Q14005 1332 aa20.57■□□□□ 0.88
NOD1-204ENST00000419601 LTBP3Q9NS15 1303 aa20.57■□□□□ 0.88
NOD1-204ENST00000419601 ANKRD13DQ6ZTN6 518 aa20.57■□□□□ 0.88
NOD1-204ENST00000419601 CCDC88AQ3V6T2 1871 aa20.56■□□□□ 0.88
NOD1-204ENST00000419601 PRELPP51888 382 aa20.56■□□□□ 0.88
NOD1-204ENST00000419601 NLRP10Q86W26 655 aa20.56■□□□□ 0.88
NOD1-204ENST00000419601 C7orf43Q8WVR3 580 aa20.56■□□□□ 0.88
NOD1-204ENST00000419601 RPGRQ92834 1020 aaKnown RBP20.56■□□□□ 0.88
NOD1-204ENST00000419601 TSR2Q969E8 191 aaKnown RBP20.56■□□□□ 0.88
NOD1-204ENST00000419601 TAOK3Q9H2K8 898 aa20.56■□□□□ 0.88
NOD1-204ENST00000419601 KDM2BQ8NHM5 1336 aa20.55■□□□□ 0.88
NOD1-204ENST00000419601 KIF3CO14782 793 aa20.55■□□□□ 0.88
NOD1-204ENST00000419601 CCDC93Q567U6 631 aa20.55■□□□□ 0.88
NOD1-204ENST00000419601 FAM9BQ8IZU0 186 aa20.55■□□□□ 0.88
NOD1-204ENST00000419601 TIAM2Q8IVF5 1701 aa20.55■□□□□ 0.88
NOD1-204ENST00000419601 HOXA10P31260 410 aaPredicted RBP20.54■□□□□ 0.88
NOD1-204ENST00000419601 SLC10A5Q5PT55 438 aa20.54■□□□□ 0.88
NOD1-204ENST00000419601 CCDC30Q5VVM6 783 aa20.54■□□□□ 0.88
NOD1-204ENST00000419601 NLRP3Q96P20 1036 aa20.53■□□□□ 0.88
NOD1-204ENST00000419601 NMRK2Q9NPI5 230 aa20.53■□□□□ 0.88
NOD1-204ENST00000419601 TRMT112Q9UI30 125 aaKnown RBP20.53■□□□□ 0.88
NOD1-204ENST00000419601 GOLGA2Q08379 1002 aa20.52■□□□□ 0.88
NOD1-204ENST00000419601 WDR63Q8IWG1 891 aa20.52■□□□□ 0.88
NOD1-204ENST00000419601 TSPYL6Q8N831 410 aa20.52■□□□□ 0.88
NOD1-204ENST00000419601 RBM17Q96I25 401 aaKnown RBP20.52■□□□□ 0.88
NOD1-204ENST00000419601 DICER1Q9UPY3 1922 aaKnown RBP20.52■□□□□ 0.88
NOD1-204ENST00000419601 RIC3Q7Z5B4 369 aa20.51■□□□□ 0.87
NOD1-204ENST00000419601 RTKN2Q8IZC4 609 aa20.51■□□□□ 0.87
NOD1-204ENST00000419601 CRAMP1Q96RY5 1269 aa20.51■□□□□ 0.87
NOD1-204ENST00000419601 ISCA1Q9BUE6 129 aa20.51■□□□□ 0.87
NOD1-204ENST00000419601 PHAXQ9H814 394 aaKnown RBP20.51■□□□□ 0.87
NOD1-204ENST00000419601 SALL2Q9Y467 1007 aaPredicted RBP20.51■□□□□ 0.87
NOD1-204ENST00000419601 SH3TC1Q8TE82 1336 aa20.51■□□□□ 0.87
NOD1-204ENST00000419601 C3orf67Q6ZVT6 689 aa20.5■□□□□ 0.87
NOD1-204ENST00000419601 GLTPD2A6NH11 291 aa20.49■□□□□ 0.87
NOD1-204ENST00000419601 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
NOD1-204ENST00000419601 TWISTNBQ3B726 338 aaPredicted RBP20.49■□□□□ 0.87
NOD1-204ENST00000419601 CC2D2BQ6DHV5 1058 aa20.49■□□□□ 0.87
NOD1-204ENST00000419601 OLFM4Q6UX06 510 aa20.49■□□□□ 0.87
NOD1-204ENST00000419601 ATP5J2-PTCD1G3V325 749 aa20.48■□□□□ 0.87
NOD1-204ENST00000419601 TOMM70O94826 608 aa20.48■□□□□ 0.87
NOD1-204ENST00000419601 DDX58O95786 925 aaKnown RBP20.48■□□□□ 0.87
NOD1-204ENST00000419601 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
NOD1-204ENST00000419601 TRIM28Q13263 835 aaKnown RBP20.48■□□□□ 0.87
NOD1-204ENST00000419601 STK31Q9BXU1 1019 aa20.48■□□□□ 0.87
NOD1-204ENST00000419601 LAMB2P55268 1798 aa20.48■□□□□ 0.87
NOD1-204ENST00000419601 FANCIQ9NVI1 1328 aa20.48■□□□□ 0.87
NOD1-204ENST00000419601 WDR90Q96KV7 1748 aa20.47■□□□□ 0.87
NOD1-204ENST00000419601 APLP1P51693 650 aa20.47■□□□□ 0.87
NOD1-204ENST00000419601 GRIPAP1Q4V328 841 aa20.47■□□□□ 0.87
NOD1-204ENST00000419601 DPY19L2Q6NUT2 758 aa20.47■□□□□ 0.87
NOD1-204ENST00000419601 SYNE4Q8N205 404 aa20.47■□□□□ 0.87
NOD1-204ENST00000419601 PPEF1O14829 653 aaPredicted RBP20.46■□□□□ 0.87
NOD1-204ENST00000419601 C16orf71Q8IYS4 520 aaPredicted RBP20.46■□□□□ 0.87
NOD1-204ENST00000419601 RRAGCQ9HB90 399 aa20.46■□□□□ 0.87
NOD1-204ENST00000419601 SNED1Q8TER0 1413 aa20.45■□□□□ 0.86
NOD1-204ENST00000419601 ZNF428Q96B54 188 aa20.45■□□□□ 0.86
NOD1-204ENST00000419601 PSMD1Q99460 953 aa20.45■□□□□ 0.86
NOD1-204ENST00000419601 DDX60Q8IY21 1712 aaKnown RBP20.44■□□□□ 0.86
NOD1-204ENST00000419601 FAM89AQ96GI7 184 aa20.44■□□□□ 0.86
NOD1-204ENST00000419601 MYD88Q99836 296 aa20.44■□□□□ 0.86
NOD1-204ENST00000419601 ZNF277Q9NRM2 450 aaPredicted RBP20.44■□□□□ 0.86
NOD1-204ENST00000419601 ABCC4O15439 1325 aa20.44■□□□□ 0.86
NOD1-204ENST00000419601 DDX46Q7L014 1031 aaKnown RBP20.43■□□□□ 0.86
NOD1-204ENST00000419601 METTL22Q9BUU2 404 aaPredicted RBP20.43■□□□□ 0.86
NOD1-204ENST00000419601 TMX4Q9H1E5 349 aaPredicted RBP20.43■□□□□ 0.86
NOD1-204ENST00000419601 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
NOD1-204ENST00000419601 TCERG1O14776 1098 aaKnown RBP20.42■□□□□ 0.86
NOD1-204ENST00000419601 BBOX1O75936 387 aa20.42■□□□□ 0.86
NOD1-204ENST00000419601 VEGFAP15692 232 aaPredicted RBP20.42■□□□□ 0.86
NOD1-204ENST00000419601 IARSP41252 1262 aaKnown RBP20.42■□□□□ 0.86
NOD1-204ENST00000419601 KSR2Q6VAB6 950 aa20.42■□□□□ 0.86
NOD1-204ENST00000419601 CCDC191Q8NCU4 936 aa20.42■□□□□ 0.86
NOD1-204ENST00000419601 RBM46Q8TBY0 533 aaKnown RBP20.42■□□□□ 0.86
NOD1-204ENST00000419601 MAP3K2Q9Y2U5 619 aa20.42■□□□□ 0.86
NOD1-204ENST00000419601 ATP6V0A2Q9Y487 856 aa20.42■□□□□ 0.86
NOD1-204ENST00000419601 SLC4A2P04920 1241 aa20.41■□□□□ 0.86
NOD1-204ENST00000419601 HSP90B1P14625 803 aaKnown RBP20.41■□□□□ 0.86
NOD1-204ENST00000419601 EXOSC9Q06265 439 aaKnown RBP20.41■□□□□ 0.86
NOD1-204ENST00000419601 RTL5Q5HYW3 569 aaPredicted RBP20.41■□□□□ 0.86
NOD1-204ENST00000419601 ZBTB38Q8NAP3 1195 aaPredicted RBP20.41■□□□□ 0.86
NOD1-204ENST00000419601 PI4KAP2A4QPH2 592 aa20.4■□□□□ 0.86
NOD1-204ENST00000419601 IRS4O14654 1257 aaPredicted RBP20.4■□□□□ 0.86
NOD1-204ENST00000419601 SF3B3Q15393 1217 aaKnown RBP20.4■□□□□ 0.86
NOD1-204ENST00000419601 PI4KAP1Q8N8J0 262 aa20.4■□□□□ 0.86
NOD1-204ENST00000419601 SPINK5Q9NQ38 1064 aaPredicted RBP20.4■□□□□ 0.86
NOD1-204ENST00000419601 CWC25Q9NXE8 425 aaPredicted RBP20.4■□□□□ 0.86
NOD1-204ENST00000419601 VAMP4O75379 141 aa20.39■□□□□ 0.85
NOD1-204ENST00000419601 GRAPQ13588 217 aa20.39■□□□□ 0.85
NOD1-204ENST00000419601 GRAPLQ8TC17 118 aaPredicted RBP20.39■□□□□ 0.85
NOD1-204ENST00000419601 CACNA1FO60840 1977 aa20.39■□□□□ 0.85
NOD1-204ENST00000419601 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
NOD1-204ENST00000419601 PCCAP05165 728 aaPredicted RBP20.38■□□□□ 0.85
NOD1-204ENST00000419601 NEXNQ0ZGT2 675 aa20.38■□□□□ 0.85
NOD1-204ENST00000419601 G2E3Q7L622 706 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms