RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 PHAXQ9H814 394 aaKnown RBP12.46□□□□□ -0.41
CTSA-205ENST00000419493 ATP5J2-PTCD1G3V325 749 aa12.45□□□□□ -0.42
CTSA-205ENST00000419493 NFKBIEO00221 500 aa12.45□□□□□ -0.42
CTSA-205ENST00000419493 TCERG1O14776 1098 aaKnown RBP12.45□□□□□ -0.42
CTSA-205ENST00000419493 TWISTNBQ3B726 338 aaPredicted RBP12.45□□□□□ -0.42
CTSA-205ENST00000419493 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
CTSA-205ENST00000419493 NLRP10Q86W26 655 aa12.45□□□□□ -0.42
CTSA-205ENST00000419493 WDR63Q8IWG1 891 aa12.45□□□□□ -0.42
CTSA-205ENST00000419493 TAOK3Q9H2K8 898 aa12.45□□□□□ -0.42
CTSA-205ENST00000419493 ABCC12Q96J65 1359 aa12.44□□□□□ -0.42
CTSA-205ENST00000419493 IL16Q14005 1332 aa12.44□□□□□ -0.42
CTSA-205ENST00000419493 KDM2BQ8NHM5 1336 aa12.44□□□□□ -0.42
CTSA-205ENST00000419493 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
CTSA-205ENST00000419493 CCDC93Q567U6 631 aa12.44□□□□□ -0.42
CTSA-205ENST00000419493 TMX4Q9H1E5 349 aaPredicted RBP12.44□□□□□ -0.42
CTSA-205ENST00000419493 COL11A2P13942 1736 aaPredicted RBP12.44□□□□□ -0.42
CTSA-205ENST00000419493 CACNA1SQ13698 1873 aa12.44□□□□□ -0.42
CTSA-205ENST00000419493 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
CTSA-205ENST00000419493 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
CTSA-205ENST00000419493 SH3TC1Q8TE82 1336 aa12.43□□□□□ -0.42
CTSA-205ENST00000419493 HCLS1P14317 486 aaPredicted RBP12.43□□□□□ -0.42
CTSA-205ENST00000419493 CRY2Q49AN0 593 aa12.43□□□□□ -0.42
CTSA-205ENST00000419493 RTL5Q5HYW3 569 aaPredicted RBP12.43□□□□□ -0.42
CTSA-205ENST00000419493 DPY19L2Q6NUT2 758 aa12.43□□□□□ -0.42
CTSA-205ENST00000419493 C16orf71Q8IYS4 520 aaPredicted RBP12.43□□□□□ -0.42
CTSA-205ENST00000419493 RTKN2Q8IZC4 609 aa12.43□□□□□ -0.42
CTSA-205ENST00000419493 SYNE4Q8N205 404 aa12.43□□□□□ -0.42
CTSA-205ENST00000419493 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
CTSA-205ENST00000419493 RNF123Q5XPI4 1314 aa12.42□□□□□ -0.42
CTSA-205ENST00000419493 PRELPP51888 382 aa12.42□□□□□ -0.42
CTSA-205ENST00000419493 SLC10A5Q5PT55 438 aa12.42□□□□□ -0.42
CTSA-205ENST00000419493 OLFM4Q6UX06 510 aa12.42□□□□□ -0.42
CTSA-205ENST00000419493 C3orf67Q6ZVT6 689 aa12.42□□□□□ -0.42
CTSA-205ENST00000419493 MYD88Q99836 296 aa12.42□□□□□ -0.42
CTSA-205ENST00000419493 RRAGCQ9HB90 399 aa12.42□□□□□ -0.42
CTSA-205ENST00000419493 SBF1O95248 1867 aa12.42□□□□□ -0.42
CTSA-205ENST00000419493 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
CTSA-205ENST00000419493 SLC4A2P04920 1241 aa12.41□□□□□ -0.42
CTSA-205ENST00000419493 EXOSC9Q06265 439 aaKnown RBP12.41□□□□□ -0.42
CTSA-205ENST00000419493 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
CTSA-205ENST00000419493 FAM89AQ96GI7 184 aa12.41□□□□□ -0.42
CTSA-205ENST00000419493 CRAMP1Q96RY5 1269 aa12.41□□□□□ -0.42
CTSA-205ENST00000419493 ISCA1Q9BUE6 129 aa12.41□□□□□ -0.42
CTSA-205ENST00000419493 MYH16Q9H6N6 1097 aa12.41□□□□□ -0.42
CTSA-205ENST00000419493 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.42
CTSA-205ENST00000419493 GLTPD2A6NH11 291 aa12.4□□□□□ -0.42
CTSA-205ENST00000419493 KIF3CO14782 793 aa12.4□□□□□ -0.42
CTSA-205ENST00000419493 PPEF1O14829 653 aaPredicted RBP12.4□□□□□ -0.42
CTSA-205ENST00000419493 HOXA10P31260 410 aaPredicted RBP12.4□□□□□ -0.42
CTSA-205ENST00000419493 FKBP4Q02790 459 aaKnown RBP eCLIP12.4□□□□□ -0.42
CTSA-205ENST00000419493 DDX46Q7L014 1031 aaKnown RBP12.4□□□□□ -0.42
CTSA-205ENST00000419493 ZNF277Q9NRM2 450 aaPredicted RBP12.4□□□□□ -0.42
CTSA-205ENST00000419493 MAP3K2Q9Y2U5 619 aa12.4□□□□□ -0.42
CTSA-205ENST00000419493 LTBP3Q9NS15 1303 aa12.39□□□□□ -0.43
CTSA-205ENST00000419493 ZC3H4Q9UPT8 1303 aaKnown RBP12.39□□□□□ -0.43
CTSA-205ENST00000419493 TNRC6CQ9HCJ0 1690 aaKnown RBP12.39□□□□□ -0.43
CTSA-205ENST00000419493 PI4KAP2A4QPH2 592 aa12.39□□□□□ -0.43
CTSA-205ENST00000419493 NEXNQ0ZGT2 675 aa12.39□□□□□ -0.43
CTSA-205ENST00000419493 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
CTSA-205ENST00000419493 PI4KAP1Q8N8J0 262 aa12.39□□□□□ -0.43
CTSA-205ENST00000419493 METTL22Q9BUU2 404 aaPredicted RBP12.39□□□□□ -0.43
CTSA-205ENST00000419493 ANKRD36CQ5JPF3 1778 aa12.38□□□□□ -0.43
CTSA-205ENST00000419493 RIC1Q4ADV7 1423 aa12.38□□□□□ -0.43
CTSA-205ENST00000419493 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
CTSA-205ENST00000419493 VAMP4O75379 141 aa12.38□□□□□ -0.43
CTSA-205ENST00000419493 TOMM70O94826 608 aa12.38□□□□□ -0.43
CTSA-205ENST00000419493 HSP90B1P14625 803 aaKnown RBP12.38□□□□□ -0.43
CTSA-205ENST00000419493 TRIM28Q13263 835 aaKnown RBP12.38□□□□□ -0.43
CTSA-205ENST00000419493 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
CTSA-205ENST00000419493 CCDC191Q8NCU4 936 aa12.38□□□□□ -0.43
CTSA-205ENST00000419493 SPINK5Q9NQ38 1064 aaPredicted RBP12.38□□□□□ -0.43
CTSA-205ENST00000419493 FER1L6Q2WGJ9 1857 aa12.38□□□□□ -0.43
CTSA-205ENST00000419493 BBOX1O75936 387 aa12.37□□□□□ -0.43
CTSA-205ENST00000419493 VEGFAP15692 232 aaPredicted RBP12.37□□□□□ -0.43
CTSA-205ENST00000419493 IARSP41252 1262 aaKnown RBP12.37□□□□□ -0.43
CTSA-205ENST00000419493 FKBP5Q13451 457 aaPredicted RBP12.37□□□□□ -0.43
CTSA-205ENST00000419493 GRIPAP1Q4V328 841 aa12.37□□□□□ -0.43
CTSA-205ENST00000419493 G2E3Q7L622 706 aa12.37□□□□□ -0.43
CTSA-205ENST00000419493 ZBTB38Q8NAP3 1195 aaPredicted RBP12.37□□□□□ -0.43
CTSA-205ENST00000419493 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
CTSA-205ENST00000419493 JARID2Q92833 1246 aaPredicted RBP12.37□□□□□ -0.43
CTSA-205ENST00000419493 CWC25Q9NXE8 425 aaPredicted RBP12.37□□□□□ -0.43
CTSA-205ENST00000419493 ARFGEF2Q9Y6D5 1785 aa12.37□□□□□ -0.43
CTSA-205ENST00000419493 ABCC4O15439 1325 aa12.37□□□□□ -0.43
CTSA-205ENST00000419493 CCER2I3L3R5 266 aa12.36□□□□□ -0.43
CTSA-205ENST00000419493 FLIIQ13045 1269 aa12.36□□□□□ -0.43
CTSA-205ENST00000419493 PSMD1Q99460 953 aa12.36□□□□□ -0.43
CTSA-205ENST00000419493 ATP6V0A2Q9Y487 856 aa12.36□□□□□ -0.43
CTSA-205ENST00000419493 DDNO94850 711 aaPredicted RBP12.35□□□□□ -0.43
CTSA-205ENST00000419493 PCCAP05165 728 aaPredicted RBP12.35□□□□□ -0.43
CTSA-205ENST00000419493 GRAPQ13588 217 aa12.35□□□□□ -0.43
CTSA-205ENST00000419493 SP8Q8IXZ3 490 aa12.35□□□□□ -0.43
CTSA-205ENST00000419493 LARGE2Q8N3Y3 721 aa12.35□□□□□ -0.43
CTSA-205ENST00000419493 MPNDQ8N594 471 aa12.35□□□□□ -0.43
CTSA-205ENST00000419493 GRAPLQ8TC17 118 aaPredicted RBP12.35□□□□□ -0.43
CTSA-205ENST00000419493 EIF6P56537 245 aaKnown RBP12.34□□□□□ -0.43
CTSA-205ENST00000419493 SF3B3Q15393 1217 aaKnown RBP12.34□□□□□ -0.43
CTSA-205ENST00000419493 CWF19L2Q2TBE0 894 aaKnown RBP12.34□□□□□ -0.43
CTSA-205ENST00000419493 DIEXFQ68CQ4 756 aaKnown RBP12.34□□□□□ -0.43
CTSA-205ENST00000419493 DPP8Q6V1X1 898 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms