RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 NBPF7P0C2Y1 421 aaPredicted RBP15.98■□□□□ 0.15
LINC00642-201ENST00000419459 USPL1Q5W0Q7 1092 aa15.98■□□□□ 0.15
LINC00642-201ENST00000419459 ATP10DQ9P241 1426 aa15.98■□□□□ 0.15
LINC00642-201ENST00000419459 NEURL1BA8MQ27 555 aa15.97■□□□□ 0.15
LINC00642-201ENST00000419459 AAMPQ13685 434 aa15.97■□□□□ 0.15
LINC00642-201ENST00000419459 TRAPPC3LQ5T215 181 aa15.97■□□□□ 0.15
LINC00642-201ENST00000419459 GIGYF2Q6Y7W6 1299 aaKnown RBP15.97■□□□□ 0.15
LINC00642-201ENST00000419459 LINS1Q8NG48 757 aa15.97■□□□□ 0.15
LINC00642-201ENST00000419459 AKT1S1Q96B36 256 aa15.97■□□□□ 0.15
LINC00642-201ENST00000419459 USP44Q9H0E7 712 aa15.97■□□□□ 0.15
LINC00642-201ENST00000419459 RFC4P35249 363 aa15.97■□□□□ 0.15
LINC00642-201ENST00000419459 ZBTB40Q9NUA8 1239 aa15.96■□□□□ 0.15
LINC00642-201ENST00000419459 UBN2Q6ZU65 1347 aa15.96■□□□□ 0.15
LINC00642-201ENST00000419459 FAM177BA6PVY3 158 aa15.95■□□□□ 0.14
LINC00642-201ENST00000419459 RGS3P49796 1198 aa15.95■□□□□ 0.14
LINC00642-201ENST00000419459 TCIRG1Q13488 830 aa15.95■□□□□ 0.14
LINC00642-201ENST00000419459 BICDL1Q6ZP65 573 aa15.95■□□□□ 0.14
LINC00642-201ENST00000419459 BCL2L12Q9HB09 334 aa15.95■□□□□ 0.14
LINC00642-201ENST00000419459 ERVV-1B6SEH8 477 aa15.95■□□□□ 0.14
LINC00642-201ENST00000419459 ZPR1O75312 459 aa15.95■□□□□ 0.14
LINC00642-201ENST00000419459 GCKRQ14397 625 aa15.95■□□□□ 0.14
LINC00642-201ENST00000419459 USP42Q9H9J4 1324 aaKnown RBP15.95■□□□□ 0.14
LINC00642-201ENST00000419459 SSFA2P28290 1259 aa15.94■□□□□ 0.14
LINC00642-201ENST00000419459 CCDC125Q86Z20 511 aa15.94■□□□□ 0.14
LINC00642-201ENST00000419459 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
LINC00642-201ENST00000419459 C9orf78Q9NZ63 289 aaPredicted RBP15.94■□□□□ 0.14
LINC00642-201ENST00000419459 NARFQ9UHQ1 456 aa15.94■□□□□ 0.14
LINC00642-201ENST00000419459 PCDHB15Q9Y5E8 787 aa15.94■□□□□ 0.14
LINC00642-201ENST00000419459 UBE3BQ7Z3V4 1068 aa15.94■□□□□ 0.14
LINC00642-201ENST00000419459 COL23A1Q86Y22 540 aaPredicted RBP15.94■□□□□ 0.14
LINC00642-201ENST00000419459 SYNE4Q8N205 404 aa15.94■□□□□ 0.14
LINC00642-201ENST00000419459 PNPLA7Q6ZV29 1317 aa15.93■□□□□ 0.14
LINC00642-201ENST00000419459 A0A087WZG4 1122 aa15.93■□□□□ 0.14
LINC00642-201ENST00000419459 GRM8O00222 908 aa15.93■□□□□ 0.14
LINC00642-201ENST00000419459 SLC15A2Q16348 729 aa15.93■□□□□ 0.14
LINC00642-201ENST00000419459 TBC1D9BQ66K14 1250 aa15.93■□□□□ 0.14
LINC00642-201ENST00000419459 ISCA1Q9BUE6 129 aa15.93■□□□□ 0.14
LINC00642-201ENST00000419459 NIP7Q9Y221 180 aaKnown RBP eCLIP15.93■□□□□ 0.14
LINC00642-201ENST00000419459 ALDH1L1O75891 902 aa15.92■□□□□ 0.14
LINC00642-201ENST00000419459 UBTFL1P0CB47 393 aaPredicted RBP15.92■□□□□ 0.14
LINC00642-201ENST00000419459 NLRP10Q86W26 655 aa15.92■□□□□ 0.14
LINC00642-201ENST00000419459 FAM89AQ96GI7 184 aa15.92■□□□□ 0.14
LINC00642-201ENST00000419459 CWC25Q9NXE8 425 aaPredicted RBP15.92■□□□□ 0.14
LINC00642-201ENST00000419459 LRRFIP2Q9Y608 721 aaKnown RBP15.92■□□□□ 0.14
LINC00642-201ENST00000419459 ADRA2BP18089 450 aa15.91■□□□□ 0.14
LINC00642-201ENST00000419459 ZNF34Q8IZ26 560 aa15.91■□□□□ 0.14
LINC00642-201ENST00000419459 ZNF652Q9Y2D9 606 aa15.91■□□□□ 0.14
LINC00642-201ENST00000419459 GYS1P13807 737 aa15.9■□□□□ 0.14
LINC00642-201ENST00000419459 GLIPR1L2Q4G1C9 344 aa15.9■□□□□ 0.14
LINC00642-201ENST00000419459 CCDC191Q8NCU4 936 aa15.9■□□□□ 0.14
LINC00642-201ENST00000419459 UPF2Q9HAU5 1272 aaKnown RBP15.9■□□□□ 0.14
LINC00642-201ENST00000419459 HSP90AB3PQ58FF7 597 aa15.9■□□□□ 0.14
LINC00642-201ENST00000419459 SUSD4Q5VX71 490 aa15.9■□□□□ 0.14
LINC00642-201ENST00000419459 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
LINC00642-201ENST00000419459 ANTXR1Q9H6X2 564 aa15.9■□□□□ 0.14
LINC00642-201ENST00000419459 STK32BQ9NY57 414 aa15.9■□□□□ 0.14
LINC00642-201ENST00000419459 GNAI3P08754 354 aa15.89■□□□□ 0.13
LINC00642-201ENST00000419459 CLEC4GQ6UXB4 293 aa15.89■□□□□ 0.13
LINC00642-201ENST00000419459 NUTM1Q86Y26 1132 aa15.89■□□□□ 0.13
LINC00642-201ENST00000419459 KAZALD1Q96I82 304 aa15.89■□□□□ 0.13
LINC00642-201ENST00000419459 SUCLG2Q96I99 432 aa15.89■□□□□ 0.13
LINC00642-201ENST00000419459 GNAI2P04899 355 aa15.89■□□□□ 0.13
LINC00642-201ENST00000419459 CCDC24Q8N4L8 307 aa15.89■□□□□ 0.13
LINC00642-201ENST00000419459 TRMT112Q9UI30 125 aaKnown RBP15.89■□□□□ 0.13
LINC00642-201ENST00000419459 EPHA10Q5JZY3 1008 aa15.88■□□□□ 0.13
LINC00642-201ENST00000419459 SIRT2Q8IXJ6 389 aa15.88■□□□□ 0.13
LINC00642-201ENST00000419459 IGHDP01880 384 aa15.87■□□□□ 0.13
LINC00642-201ENST00000419459 CASP7P55210 303 aa15.87■□□□□ 0.13
LINC00642-201ENST00000419459 TRIM28Q13263 835 aaKnown RBP15.87■□□□□ 0.13
LINC00642-201ENST00000419459 NFIXQ14938 502 aa15.87■□□□□ 0.13
LINC00642-201ENST00000419459 BICC1Q9H694 974 aaKnown RBP15.87■□□□□ 0.13
LINC00642-201ENST00000419459 COL24A1Q17RW2 1714 aa15.87■□□□□ 0.13
LINC00642-201ENST00000419459 UTYO14607 1347 aa15.87■□□□□ 0.13
LINC00642-201ENST00000419459 PNMA6EA0A0J9YXQ4 647 aa15.87■□□□□ 0.13
LINC00642-201ENST00000419459 CEP85Q6P2H3 762 aa15.87■□□□□ 0.13
LINC00642-201ENST00000419459 SETDB2Q96T68 719 aa15.87■□□□□ 0.13
LINC00642-201ENST00000419459 H7C1W4 665 aa15.86■□□□□ 0.13
LINC00642-201ENST00000419459 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
LINC00642-201ENST00000419459 QSER1Q2KHR3 1735 aa15.86■□□□□ 0.13
LINC00642-201ENST00000419459 CASZ1Q86V15 1759 aa15.86■□□□□ 0.13
LINC00642-201ENST00000419459 MYH3P11055 1940 aa15.86■□□□□ 0.13
LINC00642-201ENST00000419459 NTSR2O95665 410 aa15.85■□□□□ 0.13
LINC00642-201ENST00000419459 ZBTB38Q8NAP3 1195 aaPredicted RBP15.85■□□□□ 0.13
LINC00642-201ENST00000419459 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
LINC00642-201ENST00000419459 FSD2A1L4K1 749 aa15.85■□□□□ 0.13
LINC00642-201ENST00000419459 HCLS1P14317 486 aaPredicted RBP15.85■□□□□ 0.13
LINC00642-201ENST00000419459 HMGB2P26583 209 aaKnown RBP15.85■□□□□ 0.13
LINC00642-201ENST00000419459 CHMP4BQ9H444 224 aaKnown RBP15.85■□□□□ 0.13
LINC00642-201ENST00000419459 RRAGDQ9NQL2 400 aaPredicted RBP15.85■□□□□ 0.13
LINC00642-201ENST00000419459 ISY1Q9ULR0 285 aaKnown RBP15.85■□□□□ 0.13
LINC00642-201ENST00000419459 PCCAP05165 728 aaPredicted RBP15.84■□□□□ 0.13
LINC00642-201ENST00000419459 TBC1D32Q96NH3 1257 aa15.84■□□□□ 0.13
LINC00642-201ENST00000419459 UTP14AQ9BVJ6 771 aaKnown RBP15.84■□□□□ 0.13
LINC00642-201ENST00000419459 GOLGA6L3A6NEY3 463 aa15.84■□□□□ 0.13
LINC00642-201ENST00000419459 CLCN1P35523 988 aa15.84■□□□□ 0.13
LINC00642-201ENST00000419459 DDR1Q08345 913 aa15.84■□□□□ 0.13
LINC00642-201ENST00000419459 R3HDM1Q15032 1099 aaKnown RBP15.84■□□□□ 0.13
LINC00642-201ENST00000419459 PARP10Q53GL7 1025 aa15.84■□□□□ 0.13
LINC00642-201ENST00000419459 NBPF5PQ86XG9 351 aaPredicted RBP15.84■□□□□ 0.13
LINC00642-201ENST00000419459 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms