RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 NECTIN1Q15223 517 aa31.94■■■□□ 2.7
FOXA2-202ENST00000419308 FAM227BQ96M60 508 aa31.94■■■□□ 2.7
FOXA2-202ENST00000419308 HIP1O00291 1037 aa31.94■■■□□ 2.7
FOXA2-202ENST00000419308 ESPNB1AK53 854 aa31.93■■■□□ 2.7
FOXA2-202ENST00000419308 JAKMIP1Q96N16 626 aaKnown RBP31.93■■■□□ 2.7
FOXA2-202ENST00000419308 TM6SF1Q9BZW5 370 aa31.93■■■□□ 2.7
FOXA2-202ENST00000419308 RBSNQ9H1K0 784 aa31.93■■■□□ 2.7
FOXA2-202ENST00000419308 NMIQ13287 307 aaPredicted RBP31.92■■■□□ 2.7
FOXA2-202ENST00000419308 ANP32BQ92688 251 aaKnown RBP31.92■■■□□ 2.7
FOXA2-202ENST00000419308 BOLA2Q9H3K6 86 aa31.92■■■□□ 2.7
FOXA2-202ENST00000419308 ERBB4Q15303 1308 aa31.92■■■□□ 2.7
FOXA2-202ENST00000419308 ANO8Q9HCE9 1232 aaPredicted RBP31.92■■■□□ 2.7
FOXA2-202ENST00000419308 ZSWIM6Q9HCJ5 1215 aa31.92■■■□□ 2.7
FOXA2-202ENST00000419308 CABP4P57796 275 aa31.91■■■□□ 2.7
FOXA2-202ENST00000419308 FOXD4L6Q3SYB3 417 aaPredicted RBP31.91■■■□□ 2.7
FOXA2-202ENST00000419308 VPS53Q5VIR6 699 aa31.91■■■□□ 2.7
FOXA2-202ENST00000419308 FOXD4L3Q6VB84 417 aaPredicted RBP31.91■■■□□ 2.7
FOXA2-202ENST00000419308 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.91■■■□□ 2.7
FOXA2-202ENST00000419308 CPDO75976 1380 aa31.91■■■□□ 2.7
FOXA2-202ENST00000419308 JARID2Q92833 1246 aaPredicted RBP31.91■■■□□ 2.7
FOXA2-202ENST00000419308 COPRSQ9NQ92 184 aa31.91■■■□□ 2.7
FOXA2-202ENST00000419308 SNRKQ9NRH2 765 aa31.91■■■□□ 2.7
FOXA2-202ENST00000419308 SYCE3A1L190 88 aa31.9■■■□□ 2.7
FOXA2-202ENST00000419308 LRSAM1Q6UWE0 723 aa31.9■■■□□ 2.7
FOXA2-202ENST00000419308 MAP4K1Q92918 833 aa31.9■■■□□ 2.7
FOXA2-202ENST00000419308 PDRG1Q9NUG6 133 aa31.9■■■□□ 2.7
FOXA2-202ENST00000419308 RBM8AQ9Y5S9 174 aaKnown RBP31.9■■■□□ 2.7
FOXA2-202ENST00000419308 LARGE1O95461 756 aa31.89■■■□□ 2.7
FOXA2-202ENST00000419308 RFX5P48382 616 aaPredicted RBP31.89■■■□□ 2.7
FOXA2-202ENST00000419308 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.89■■■□□ 2.7
FOXA2-202ENST00000419308 CYP46A1Q9Y6A2 500 aa31.89■■■□□ 2.7
FOXA2-202ENST00000419308 AFDNP55196 1824 aaKnown RBP31.89■■■□□ 2.7
FOXA2-202ENST00000419308 FSD1Q9BTV5 496 aa31.88■■■□□ 2.69
FOXA2-202ENST00000419308 ZKSCAN1P17029 563 aaPredicted RBP31.88■■■□□ 2.69
FOXA2-202ENST00000419308 UBE3BQ7Z3V4 1068 aa31.88■■■□□ 2.69
FOXA2-202ENST00000419308 GDPD2Q9HCC8 539 aa31.88■■■□□ 2.69
FOXA2-202ENST00000419308 ARFGEF2Q9Y6D5 1785 aa31.88■■■□□ 2.69
FOXA2-202ENST00000419308 GLI3P10071 1580 aa31.88■■■□□ 2.69
FOXA2-202ENST00000419308 A0A0D9SFI3 127 aa31.87■■■□□ 2.69
FOXA2-202ENST00000419308 CREB3L3Q68CJ9 461 aa31.87■■■□□ 2.69
FOXA2-202ENST00000419308 PTPN12Q05209 780 aaKnown RBP31.87■■■□□ 2.69
FOXA2-202ENST00000419308 RABL6Q3YEC7 729 aaPredicted RBP31.87■■■□□ 2.69
FOXA2-202ENST00000419308 SMC3Q9UQE7 1217 aa31.87■■■□□ 2.69
FOXA2-202ENST00000419308 TCHHQ07283 1943 aa31.86■■■□□ 2.69
FOXA2-202ENST00000419308 ZSCAN22P10073 491 aaPredicted RBP31.86■■■□□ 2.69
FOXA2-202ENST00000419308 SYT1P21579 422 aa31.86■■■□□ 2.69
FOXA2-202ENST00000419308 COL15A1P39059 1388 aa31.86■■■□□ 2.69
FOXA2-202ENST00000419308 ATP5J2-PTCD1G3V325 749 aa31.86■■■□□ 2.69
FOXA2-202ENST00000419308 PTCD1O75127 700 aaKnown RBP31.86■■■□□ 2.69
FOXA2-202ENST00000419308 STX6O43752 255 aa31.85■■■□□ 2.69
FOXA2-202ENST00000419308 KCNJ4P48050 445 aa31.85■■■□□ 2.69
FOXA2-202ENST00000419308 USP48Q86UV5 1035 aa31.85■■■□□ 2.69
FOXA2-202ENST00000419308 GADD45BO75293 160 aaPredicted RBP31.84■■■□□ 2.69
FOXA2-202ENST00000419308 PARP4Q9UKK3 1724 aaKnown RBP31.84■■■□□ 2.69
FOXA2-202ENST00000419308 LAMB4A4D0S4 1761 aa31.84■■■□□ 2.69
FOXA2-202ENST00000419308 A0A087WZG4 1122 aa31.84■■■□□ 2.69
FOXA2-202ENST00000419308 PLBD2Q8NHP8 589 aa31.84■■■□□ 2.69
FOXA2-202ENST00000419308 ZSCAN31Q96LW9 406 aaPredicted RBP31.84■■■□□ 2.69
FOXA2-202ENST00000419308 MED23Q9ULK4 1368 aa31.83■■■□□ 2.69
FOXA2-202ENST00000419308 CCDC83Q8IWF9 413 aa31.83■■■□□ 2.69
FOXA2-202ENST00000419308 DDX54Q8TDD1 881 aaKnown RBP31.83■■■□□ 2.69
FOXA2-202ENST00000419308 SH2B1Q9NRF2 756 aaPredicted RBP31.83■■■□□ 2.69
FOXA2-202ENST00000419308 DBNLQ9UJU6 430 aaKnown RBP31.83■■■□□ 2.69
FOXA2-202ENST00000419308 SLC27A2O14975 620 aa31.82■■■□□ 2.68
FOXA2-202ENST00000419308 TFCP2Q12800 502 aa31.82■■■□□ 2.68
FOXA2-202ENST00000419308 TNNI3KQ59H18 835 aa31.82■■■□□ 2.68
FOXA2-202ENST00000419308 FPGT-TNNI3KV9GXZ4 949 aa31.82■■■□□ 2.68
FOXA2-202ENST00000419308 TMEM87AQ8NBN3 555 aa31.81■■■□□ 2.68
FOXA2-202ENST00000419308 CASP7P55210 303 aa31.81■■■□□ 2.68
FOXA2-202ENST00000419308 EDC3Q96F86 508 aaKnown RBP31.8■■■□□ 2.68
FOXA2-202ENST00000419308 ATP5JP18859 108 aa31.8■■■□□ 2.68
FOXA2-202ENST00000419308 NBPF26B4DH59 902 aa31.79■■■□□ 2.68
FOXA2-202ENST00000419308 GJB2P29033 226 aa31.79■■■□□ 2.68
FOXA2-202ENST00000419308 NBPF14Q5TI25 921 aa31.79■■■□□ 2.68
FOXA2-202ENST00000419308 NBPF10Q6P3W6 841 aaKnown RBP31.79■■■□□ 2.68
FOXA2-202ENST00000419308 NBPF15Q8N660 670 aa31.79■■■□□ 2.68
FOXA2-202ENST00000419308 SYAP1Q96A49 352 aaPredicted RBP31.79■■■□□ 2.68
FOXA2-202ENST00000419308 ST3GAL1Q11201 340 aa31.79■■■□□ 2.68
FOXA2-202ENST00000419308 ME3Q16798 604 aa31.79■■■□□ 2.68
FOXA2-202ENST00000419308 ZNF589Q86UQ0 364 aaPredicted RBP31.79■■■□□ 2.68
FOXA2-202ENST00000419308 F13A1P00488 732 aa31.78■■■□□ 2.68
FOXA2-202ENST00000419308 CNPY2Q9Y2B0 182 aa31.78■■■□□ 2.68
FOXA2-202ENST00000419308 COL9A3Q14050 684 aaPredicted RBP31.78■■■□□ 2.68
FOXA2-202ENST00000419308 BRINP3Q76B58 766 aa31.78■■■□□ 2.68
FOXA2-202ENST00000419308 JCADQ9P266 1359 aa31.78■■■□□ 2.68
FOXA2-202ENST00000419308 WDR17Q8IZU2 1322 aa31.77■■■□□ 2.68
FOXA2-202ENST00000419308 PSMA5P28066 241 aa31.77■■■□□ 2.68
FOXA2-202ENST00000419308 PDLIM2Q96JY6 352 aa31.77■■■□□ 2.68
FOXA2-202ENST00000419308 PCDH11XQ9BZA7 1347 aa31.77■■■□□ 2.68
FOXA2-202ENST00000419308 PCDH11YQ9BZA8 1340 aa31.77■■■□□ 2.68
FOXA2-202ENST00000419308 RNF20Q5VTR2 975 aa31.77■■■□□ 2.68
FOXA2-202ENST00000419308 ZCRB1Q8TBF4 217 aaKnown RBP31.76■■■□□ 2.68
FOXA2-202ENST00000419308 TPCN1Q9ULQ1 816 aa31.76■■■□□ 2.68
FOXA2-202ENST00000419308 PRDM11Q9NQV5 511 aa31.75■■■□□ 2.67
FOXA2-202ENST00000419308 DTNBO60941 627 aa31.75■■■□□ 2.67
FOXA2-202ENST00000419308 LMBR1LQ6UX01 489 aa31.75■■■□□ 2.67
FOXA2-202ENST00000419308 ATP6V1DQ9Y5K8 247 aa31.75■■■□□ 2.67
FOXA2-202ENST00000419308 TAF6LQ9Y6J9 622 aa31.75■■■□□ 2.67
FOXA2-202ENST00000419308 TOM1L2Q6ZVM7 507 aa31.74■■■□□ 2.67
FOXA2-202ENST00000419308 XIRP1Q702N8 1843 aaKnown RBP31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms