RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 PA2G4Q9UQ80 394 aaKnown RBP17.58■□□□□ 0.41
HLA-DPA1-242ENST00000419277 NRAPQ86VF7 1730 aa17.58■□□□□ 0.4
HLA-DPA1-242ENST00000419277 TRAK2O60296 914 aa17.58■□□□□ 0.4
HLA-DPA1-242ENST00000419277 STARD3NLO95772 234 aa17.58■□□□□ 0.4
HLA-DPA1-242ENST00000419277 PDIA4P13667 645 aaKnown RBP17.58■□□□□ 0.4
HLA-DPA1-242ENST00000419277 TM6SF1Q9BZW5 370 aa17.58■□□□□ 0.4
HLA-DPA1-242ENST00000419277 LSG1Q9H089 658 aaKnown RBP17.58■□□□□ 0.4
HLA-DPA1-242ENST00000419277 NBPF26B4DH59 902 aa17.57■□□□□ 0.4
HLA-DPA1-242ENST00000419277 RFX5P48382 616 aaPredicted RBP17.57■□□□□ 0.4
HLA-DPA1-242ENST00000419277 PTPN12Q05209 780 aaKnown RBP17.57■□□□□ 0.4
HLA-DPA1-242ENST00000419277 NBPF14Q5TI25 921 aa17.57■□□□□ 0.4
HLA-DPA1-242ENST00000419277 NBPF10Q6P3W6 841 aaKnown RBP17.57■□□□□ 0.4
HLA-DPA1-242ENST00000419277 NBPF15Q8N660 670 aa17.57■□□□□ 0.4
HLA-DPA1-242ENST00000419277 EAF2Q96CJ1 260 aaPredicted RBP17.57■□□□□ 0.4
HLA-DPA1-242ENST00000419277 THRAP3Q9Y2W1 955 aaKnown RBP17.57■□□□□ 0.4
HLA-DPA1-242ENST00000419277 BCL9O00512 1426 aa17.56■□□□□ 0.4
HLA-DPA1-242ENST00000419277 ATP5JP18859 108 aa17.56■□□□□ 0.4
HLA-DPA1-242ENST00000419277 HSP90AB3PQ58FF7 597 aa17.56■□□□□ 0.4
HLA-DPA1-242ENST00000419277 DDX54Q8TDD1 881 aaKnown RBP17.56■□□□□ 0.4
HLA-DPA1-242ENST00000419277 KCNB2Q92953 911 aa17.56■□□□□ 0.4
HLA-DPA1-242ENST00000419277 BTG4Q9NY30 223 aa17.56■□□□□ 0.4
HLA-DPA1-242ENST00000419277 JCADQ9P266 1359 aa17.56■□□□□ 0.4
HLA-DPA1-242ENST00000419277 CIAO1O76071 339 aa17.55■□□□□ 0.4
HLA-DPA1-242ENST00000419277 TMX3Q96JJ7 454 aa17.55■□□□□ 0.4
HLA-DPA1-242ENST00000419277 LTBP4Q8N2S1 1624 aa17.55■□□□□ 0.4
HLA-DPA1-242ENST00000419277 IL15P40933 162 aaPredicted RBP17.55■□□□□ 0.4
HLA-DPA1-242ENST00000419277 RNF20Q5VTR2 975 aa17.55■□□□□ 0.4
HLA-DPA1-242ENST00000419277 KIF6Q6ZMV9 814 aa17.55■□□□□ 0.4
HLA-DPA1-242ENST00000419277 PHLPP1O60346 1717 aa17.54■□□□□ 0.4
HLA-DPA1-242ENST00000419277 ZKSCAN1P17029 563 aaPredicted RBP17.54■□□□□ 0.4
HLA-DPA1-242ENST00000419277 TNNI3KQ59H18 835 aa17.54■□□□□ 0.4
HLA-DPA1-242ENST00000419277 CWC27Q6UX04 472 aaKnown RBP17.54■□□□□ 0.4
HLA-DPA1-242ENST00000419277 HMG20BQ9P0W2 317 aa17.54■□□□□ 0.4
HLA-DPA1-242ENST00000419277 FPGT-TNNI3KV9GXZ4 949 aa17.54■□□□□ 0.4
HLA-DPA1-242ENST00000419277 CCDC171Q6TFL3 1326 aa17.54■□□□□ 0.4
HLA-DPA1-242ENST00000419277 MYH3P11055 1940 aa17.54■□□□□ 0.4
HLA-DPA1-242ENST00000419277 EPHA10Q5JZY3 1008 aa17.53■□□□□ 0.4
HLA-DPA1-242ENST00000419277 ISCA1Q9BUE6 129 aa17.53■□□□□ 0.4
HLA-DPA1-242ENST00000419277 PLA2G12BQ9BX93 195 aa17.53■□□□□ 0.4
HLA-DPA1-242ENST00000419277 PALD1Q9ULE6 856 aa17.53■□□□□ 0.4
HLA-DPA1-242ENST00000419277 DOT1LQ8TEK3 1739 aa17.53■□□□□ 0.4
HLA-DPA1-242ENST00000419277 ABCC12Q96J65 1359 aa17.53■□□□□ 0.4
HLA-DPA1-242ENST00000419277 MED23Q9ULK4 1368 aa17.53■□□□□ 0.4
HLA-DPA1-242ENST00000419277 PSMA5P28066 241 aa17.52■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ZNF831Q5JPB2 1677 aa17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 BAG4O95429 457 aaKnown RBP17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 FOXO4P98177 505 aa17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 TCIRG1Q13488 830 aa17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 KLHL40Q2TBA0 621 aa17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 FSD1Q9BTV5 496 aa17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 SIL1Q9H173 461 aa17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 SNX14Q9Y5W7 946 aa17.51■□□□□ 0.39
HLA-DPA1-242ENST00000419277 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ATP5J2-PTCD1G3V325 749 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 PTCD1O75127 700 aaKnown RBP17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 LRRFIP1Q32MZ4 808 aaKnown RBP17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 VPS53Q5VIR6 699 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 LMBR1LQ6UX01 489 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ZSCAN31Q96LW9 406 aaPredicted RBP17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 SH2B1Q9NRF2 756 aaPredicted RBP17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ZNF609O15014 1411 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 RREB1Q92766 1687 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 EXOC5O00471 708 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 MAP4K4O95819 1239 aaPredicted RBP17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 PCCAP05165 728 aaPredicted RBP17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 TTLL7Q6ZT98 887 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 MAP4K1Q92918 833 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 TTC14Q96N46 770 aa17.5■□□□□ 0.39
HLA-DPA1-242ENST00000419277 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 FSD2A1L4K1 749 aa17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 GOLGA6L3A6NEY3 463 aa17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 A1BGP04217 495 aa17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 SSFA2P28290 1259 aa17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 KRT32Q14532 448 aa17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 PIGBQ92521 554 aa17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 HAUS7Q99871 368 aa17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 CCDC8Q9H0W5 538 aaPredicted RBP17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 IL25Q9H293 177 aa17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 DBNLQ9UJU6 430 aaKnown RBP17.49■□□□□ 0.39
HLA-DPA1-242ENST00000419277 MAP3K15Q6ZN16 1313 aa17.48■□□□□ 0.39
HLA-DPA1-242ENST00000419277 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ANKRD1Q15327 319 aa17.48■□□□□ 0.39
HLA-DPA1-242ENST00000419277 TSGA10IPQ3SY00 556 aa17.48■□□□□ 0.39
HLA-DPA1-242ENST00000419277 LIMCH1Q9UPQ0 1083 aa17.48■□□□□ 0.39
HLA-DPA1-242ENST00000419277 CYP46A1Q9Y6A2 500 aa17.48■□□□□ 0.39
HLA-DPA1-242ENST00000419277 RPAP1Q9BWH6 1393 aaPredicted RBP17.48■□□□□ 0.39
HLA-DPA1-242ENST00000419277 EYA2O00167 538 aa17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 TFCP2Q12800 502 aa17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ALDH8A1Q9H2A2 487 aaPredicted RBP17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 AKAP2Q9Y2D5 859 aa17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 WDR33Q9C0J8 1336 aaKnown RBP17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ERVV-1B6SEH8 477 aa17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 PIP4K2AP48426 406 aaPredicted RBP17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 GIGYF2Q6Y7W6 1299 aaKnown RBP17.47■□□□□ 0.39
HLA-DPA1-242ENST00000419277 ZBTB38Q8NAP3 1195 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms