RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
CHMP5-202ENST00000419016 PCCAP05165 728 aaPredicted RBP17.19■□□□□ 0.34
CHMP5-202ENST00000419016 PELP1Q8IZL8 1130 aaKnown RBP17.19■□□□□ 0.34
CHMP5-202ENST00000419016 NARFQ9UHQ1 456 aa17.19■□□□□ 0.34
CHMP5-202ENST00000419016 SRGAP3O43295 1099 aa17.18■□□□□ 0.34
CHMP5-202ENST00000419016 GPTP24298 496 aa17.18■□□□□ 0.34
CHMP5-202ENST00000419016 HMGB2P26583 209 aaKnown RBP17.18■□□□□ 0.34
CHMP5-202ENST00000419016 FOXO4P98177 505 aa17.18■□□□□ 0.34
CHMP5-202ENST00000419016 ZBTB38Q8NAP3 1195 aaPredicted RBP17.18■□□□□ 0.34
CHMP5-202ENST00000419016 BCL2L12Q9HB09 334 aa17.18■□□□□ 0.34
CHMP5-202ENST00000419016 CHD1LQ86WJ1 897 aa17.17■□□□□ 0.34
CHMP5-202ENST00000419016 ARHGEF1Q92888 912 aaKnown RBP17.17■□□□□ 0.34
CHMP5-202ENST00000419016 PDE4AP27815 886 aa17.17■□□□□ 0.34
CHMP5-202ENST00000419016 AK7Q96M32 723 aa17.17■□□□□ 0.34
CHMP5-202ENST00000419016 RGPD3A6NKT7 1758 aaPredicted RBP17.16■□□□□ 0.34
CHMP5-202ENST00000419016 RGPD4Q7Z3J3 1758 aa17.16■□□□□ 0.34
CHMP5-202ENST00000419016 SCN7AQ01118 1682 aa17.16■□□□□ 0.34
CHMP5-202ENST00000419016 ADRA2BP18089 450 aa17.16■□□□□ 0.34
CHMP5-202ENST00000419016 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
CHMP5-202ENST00000419016 ZNF652Q9Y2D9 606 aa17.16■□□□□ 0.34
CHMP5-202ENST00000419016 NOP58Q9Y2X3 529 aaKnown RBP17.16■□□□□ 0.34
CHMP5-202ENST00000419016 CDHR2Q9BYE9 1310 aa17.16■□□□□ 0.34
CHMP5-202ENST00000419016 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
CHMP5-202ENST00000419016 UBR3Q6ZT12 1888 aa17.15■□□□□ 0.34
CHMP5-202ENST00000419016 PARP10Q53GL7 1025 aa17.15■□□□□ 0.34
CHMP5-202ENST00000419016 FAM89AQ96GI7 184 aa17.15■□□□□ 0.34
CHMP5-202ENST00000419016 RFX5P48382 616 aaPredicted RBP17.14■□□□□ 0.33
CHMP5-202ENST00000419016 RTL5Q5HYW3 569 aaPredicted RBP17.14■□□□□ 0.33
CHMP5-202ENST00000419016 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
CHMP5-202ENST00000419016 SUSD4Q5VX71 490 aa17.14■□□□□ 0.33
CHMP5-202ENST00000419016 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
CHMP5-202ENST00000419016 SRP68Q9UHB9 627 aaKnown RBP17.14■□□□□ 0.33
CHMP5-202ENST00000419016 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.33
CHMP5-202ENST00000419016 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
CHMP5-202ENST00000419016 SYNE4Q8N205 404 aa17.13■□□□□ 0.33
CHMP5-202ENST00000419016 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
CHMP5-202ENST00000419016 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
CHMP5-202ENST00000419016 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.13■□□□□ 0.33
CHMP5-202ENST00000419016 SSFA2P28290 1259 aa17.13■□□□□ 0.33
CHMP5-202ENST00000419016 RGS3P49796 1198 aa17.13■□□□□ 0.33
CHMP5-202ENST00000419016 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
CHMP5-202ENST00000419016 C4AP0C0L4 1744 aa17.13■□□□□ 0.33
CHMP5-202ENST00000419016 CSF1RP07333 972 aa17.12■□□□□ 0.33
CHMP5-202ENST00000419016 LMBR1LQ6UX01 489 aa17.12■□□□□ 0.33
CHMP5-202ENST00000419016 CAMKK2Q96RR4 588 aa17.12■□□□□ 0.33
CHMP5-202ENST00000419016 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
CHMP5-202ENST00000419016 RAB11FIP3O75154 756 aa17.11■□□□□ 0.33
CHMP5-202ENST00000419016 ZPR1O75312 459 aa17.11■□□□□ 0.33
CHMP5-202ENST00000419016 SURF6O75683 361 aaKnown RBP17.11■□□□□ 0.33
CHMP5-202ENST00000419016 NTSR2O95665 410 aa17.11■□□□□ 0.33
CHMP5-202ENST00000419016 RFC4P35249 363 aa17.11■□□□□ 0.33
CHMP5-202ENST00000419016 TBC1D9BQ66K14 1250 aa17.11■□□□□ 0.33
CHMP5-202ENST00000419016 UTP14AQ9BVJ6 771 aaKnown RBP17.11■□□□□ 0.33
CHMP5-202ENST00000419016 COPRSQ9NQ92 184 aa17.11■□□□□ 0.33
CHMP5-202ENST00000419016 PHF14O94880 888 aa17.1■□□□□ 0.33
CHMP5-202ENST00000419016 PTPN12Q05209 780 aaKnown RBP17.1■□□□□ 0.33
CHMP5-202ENST00000419016 ZNF827Q17R98 1081 aa17.1■□□□□ 0.33
CHMP5-202ENST00000419016 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
CHMP5-202ENST00000419016 SH3TC1Q8TE82 1336 aa17.1■□□□□ 0.33
CHMP5-202ENST00000419016 IRS4O14654 1257 aaPredicted RBP17.09■□□□□ 0.33
CHMP5-202ENST00000419016 SMARCA5O60264 1052 aaPredicted RBP17.09■□□□□ 0.33
CHMP5-202ENST00000419016 HSP90AB4PQ58FF6 505 aa17.09■□□□□ 0.33
CHMP5-202ENST00000419016 LRRCC1Q9C099 1032 aa17.09■□□□□ 0.33
CHMP5-202ENST00000419016 APBB1O00213 710 aa17.08■□□□□ 0.32
CHMP5-202ENST00000419016 PDE8AO60658 829 aa17.08■□□□□ 0.32
CHMP5-202ENST00000419016 EN1Q05925 392 aaPredicted RBP17.08■□□□□ 0.32
CHMP5-202ENST00000419016 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
CHMP5-202ENST00000419016 TTLL11Q8NHH1 800 aa17.08■□□□□ 0.32
CHMP5-202ENST00000419016 RHPN1Q8TCX5 695 aa17.08■□□□□ 0.32
CHMP5-202ENST00000419016 COL24A1Q17RW2 1714 aa17.07■□□□□ 0.32
CHMP5-202ENST00000419016 GYS1P13807 737 aa17.07■□□□□ 0.32
CHMP5-202ENST00000419016 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
CHMP5-202ENST00000419016 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
CHMP5-202ENST00000419016 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
CHMP5-202ENST00000419016 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
CHMP5-202ENST00000419016 CTSWP56202 376 aa17.06■□□□□ 0.32
CHMP5-202ENST00000419016 PLEKHM2Q8IWE5 1019 aa17.06■□□□□ 0.32
CHMP5-202ENST00000419016 SETDB2Q96T68 719 aa17.06■□□□□ 0.32
CHMP5-202ENST00000419016 SASH1O94885 1247 aa17.06■□□□□ 0.32
CHMP5-202ENST00000419016 SLC10A5Q5PT55 438 aa17.06■□□□□ 0.32
CHMP5-202ENST00000419016 OTUD7AQ8TE49 926 aaPredicted RBP17.06■□□□□ 0.32
CHMP5-202ENST00000419016 FAM177BA6PVY3 158 aa17.05■□□□□ 0.32
CHMP5-202ENST00000419016 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
CHMP5-202ENST00000419016 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
CHMP5-202ENST00000419016 TFCP2L1Q9NZI6 479 aa17.05■□□□□ 0.32
CHMP5-202ENST00000419016 NFIXQ14938 502 aa17.04■□□□□ 0.32
CHMP5-202ENST00000419016 FAM161AQ3B820 660 aa17.04■□□□□ 0.32
CHMP5-202ENST00000419016 BICDL1Q6ZP65 573 aa17.04■□□□□ 0.32
CHMP5-202ENST00000419016 NUTM1Q86Y26 1132 aa17.04■□□□□ 0.32
CHMP5-202ENST00000419016 DDX60Q8IY21 1712 aaKnown RBP17.04■□□□□ 0.32
CHMP5-202ENST00000419016 TM4SF1P30408 202 aa17.04■□□□□ 0.32
CHMP5-202ENST00000419016 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
CHMP5-202ENST00000419016 ERFEQ4G0M1 354 aa17.04■□□□□ 0.32
CHMP5-202ENST00000419016 COL23A1Q86Y22 540 aaPredicted RBP17.04■□□□□ 0.32
CHMP5-202ENST00000419016 ZBTB47Q9UFB7 747 aaPredicted RBP17.04■□□□□ 0.32
CHMP5-202ENST00000419016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
CHMP5-202ENST00000419016 LAMB2P55268 1798 aa17.03■□□□□ 0.32
CHMP5-202ENST00000419016 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
CHMP5-202ENST00000419016 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
CHMP5-202ENST00000419016 ATG9AQ7Z3C6 839 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms