RNA–Protein interactions for RNA: ENST00000418994.1

CAPN7-203, Transcript of calpain 7, humanhuman

TSL 5

Gene CAPN7, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-203ENST00000418994 SPINK5Q9NQ38 1064 aaPredicted RBP33.57■■■□□ 2.96
CAPN7-203ENST00000418994 ARFGEF2Q9Y6D5 1785 aa33.57■■■□□ 2.96
CAPN7-203ENST00000418994 SLX4Q8IY92 1834 aa33.56■■■□□ 2.96
CAPN7-203ENST00000418994 RIC3Q7Z5B4 369 aa33.56■■■□□ 2.96
CAPN7-203ENST00000418994 STK31Q9BXU1 1019 aa33.56■■■□□ 2.96
CAPN7-203ENST00000418994 MYH16Q9H6N6 1097 aa33.56■■■□□ 2.96
CAPN7-203ENST00000418994 ZNF219Q9P2Y4 722 aaPredicted RBP33.56■■■□□ 2.96
CAPN7-203ENST00000418994 RASSF7Q02833 373 aa33.55■■■□□ 2.96
CAPN7-203ENST00000418994 ISCA1Q9BUE6 129 aa33.55■■■□□ 2.96
CAPN7-203ENST00000418994 ZNF521Q96K83 1311 aa33.54■■■□□ 2.96
CAPN7-203ENST00000418994 CACNA1SQ13698 1873 aa33.54■■■□□ 2.96
CAPN7-203ENST00000418994 EXOSC9Q06265 439 aaKnown RBP33.53■■■□□ 2.96
CAPN7-203ENST00000418994 SLC10A5Q5PT55 438 aa33.53■■■□□ 2.96
CAPN7-203ENST00000418994 DIEXFQ68CQ4 756 aaKnown RBP33.53■■■□□ 2.96
CAPN7-203ENST00000418994 TRMT112Q9UI30 125 aaKnown RBP33.53■■■□□ 2.96
CAPN7-203ENST00000418994 ATP5J2-PTCD1G3V325 749 aa33.52■■■□□ 2.96
CAPN7-203ENST00000418994 TCERG1O14776 1098 aaKnown RBP33.52■■■□□ 2.96
CAPN7-203ENST00000418994 DDX58O95786 925 aaKnown RBP33.52■■■□□ 2.96
CAPN7-203ENST00000418994 ALDH1B1P30837 517 aa33.52■■■□□ 2.96
CAPN7-203ENST00000418994 SOGA3Q5TF21 947 aa33.52■■■□□ 2.96
CAPN7-203ENST00000418994 RPGRQ92834 1020 aaKnown RBP33.52■■■□□ 2.96
CAPN7-203ENST00000418994 RNF181Q9P0P0 153 aa33.52■■■□□ 2.96
CAPN7-203ENST00000418994 NFKBIEO00221 500 aa33.51■■■□□ 2.95
CAPN7-203ENST00000418994 NLRP3Q96P20 1036 aa33.51■■■□□ 2.95
CAPN7-203ENST00000418994 SH3TC1Q8TE82 1336 aa33.51■■■□□ 2.95
CAPN7-203ENST00000418994 SBF1O95248 1867 aa33.5■■■□□ 2.95
CAPN7-203ENST00000418994 VAMP4O75379 141 aa33.49■■■□□ 2.95
CAPN7-203ENST00000418994 LMNB1P20700 586 aa33.49■■■□□ 2.95
CAPN7-203ENST00000418994 HOXA10P31260 410 aaPredicted RBP33.49■■■□□ 2.95
CAPN7-203ENST00000418994 TRIM28Q13263 835 aaKnown RBP33.49■■■□□ 2.95
CAPN7-203ENST00000418994 C3orf67Q6ZVT6 689 aa33.49■■■□□ 2.95
CAPN7-203ENST00000418994 C7orf43Q8WVR3 580 aa33.49■■■□□ 2.95
CAPN7-203ENST00000418994 C1QTNF8P60827 252 aa33.48■■■□□ 2.95
CAPN7-203ENST00000418994 ZNF526Q8TF50 670 aaPredicted RBP33.48■■■□□ 2.95
CAPN7-203ENST00000418994 SLC4A2P04920 1241 aa33.47■■■□□ 2.95
CAPN7-203ENST00000418994 SYNE4Q8N205 404 aa33.47■■■□□ 2.95
CAPN7-203ENST00000418994 ZNF428Q96B54 188 aa33.47■■■□□ 2.95
CAPN7-203ENST00000418994 GPBP1L1Q9HC44 474 aaPredicted RBP33.47■■■□□ 2.95
CAPN7-203ENST00000418994 FER1L6Q2WGJ9 1857 aa33.46■■■□□ 2.95
CAPN7-203ENST00000418994 HCLS1P14317 486 aaPredicted RBP33.46■■■□□ 2.95
CAPN7-203ENST00000418994 RBM17Q96I25 401 aaKnown RBP33.46■■■□□ 2.95
CAPN7-203ENST00000418994 MYD88Q99836 296 aa33.46■■■□□ 2.95
CAPN7-203ENST00000418994 PRELPP51888 382 aa33.45■■■□□ 2.95
CAPN7-203ENST00000418994 CCDC93Q567U6 631 aa33.45■■■□□ 2.95
CAPN7-203ENST00000418994 KSR2Q6VAB6 950 aa33.44■■■□□ 2.94
CAPN7-203ENST00000418994 CRAMP1Q96RY5 1269 aa33.44■■■□□ 2.94
CAPN7-203ENST00000418994 METTL22Q9BUU2 404 aaPredicted RBP33.44■■■□□ 2.94
CAPN7-203ENST00000418994 TAOK3Q9H2K8 898 aa33.44■■■□□ 2.94
CAPN7-203ENST00000418994 MAP3K2Q9Y2U5 619 aa33.44■■■□□ 2.94
CAPN7-203ENST00000418994 LTBP3Q9NS15 1303 aa33.44■■■□□ 2.94
CAPN7-203ENST00000418994 G2E3Q7L622 706 aa33.43■■■□□ 2.94
CAPN7-203ENST00000418994 PI4KAP2A4QPH2 592 aa33.42■■■□□ 2.94
CAPN7-203ENST00000418994 MIER1Q8N108 512 aa33.42■■■□□ 2.94
CAPN7-203ENST00000418994 PI4KAP1Q8N8J0 262 aa33.42■■■□□ 2.94
CAPN7-203ENST00000418994 FAM89AQ96GI7 184 aa33.42■■■□□ 2.94
CAPN7-203ENST00000418994 ZC3H4Q9UPT8 1303 aaKnown RBP33.4■■■□□ 2.94
CAPN7-203ENST00000418994 CCDC191Q8NCU4 936 aa33.4■■■□□ 2.94
CAPN7-203ENST00000418994 CACNA1FO60840 1977 aa33.4■■■□□ 2.94
CAPN7-203ENST00000418994 E9PSI1 815 aa33.39■■■□□ 2.94
CAPN7-203ENST00000418994 FLIIQ13045 1269 aa33.39■■■□□ 2.94
CAPN7-203ENST00000418994 OLFM4Q6UX06 510 aa33.39■■■□□ 2.94
CAPN7-203ENST00000418994 RTKN2Q8IZC4 609 aa33.39■■■□□ 2.94
CAPN7-203ENST00000418994 CCDC88AQ3V6T2 1871 aa33.39■■■□□ 2.94
CAPN7-203ENST00000418994 LAMB2P55268 1798 aa33.39■■■□□ 2.94
CAPN7-203ENST00000418994 ZBTB38Q8NAP3 1195 aaPredicted RBP33.38■■■□□ 2.93
CAPN7-203ENST00000418994 CWC25Q9NXE8 425 aaPredicted RBP33.38■■■□□ 2.93
CAPN7-203ENST00000418994 RTL5Q5HYW3 569 aaPredicted RBP33.37■■■□□ 2.93
CAPN7-203ENST00000418994 DDX60Q8IY21 1712 aaKnown RBP33.36■■■□□ 2.93
CAPN7-203ENST00000418994 PPEF1O14829 653 aaPredicted RBP33.36■■■□□ 2.93
CAPN7-203ENST00000418994 NEXNQ0ZGT2 675 aa33.36■■■□□ 2.93
CAPN7-203ENST00000418994 CC2D2BQ6DHV5 1058 aa33.36■■■□□ 2.93
CAPN7-203ENST00000418994 ABCC4O15439 1325 aa33.35■■■□□ 2.93
CAPN7-203ENST00000418994 IRS4O14654 1257 aaPredicted RBP33.35■■■□□ 2.93
CAPN7-203ENST00000418994 FKBP4Q02790 459 aaKnown RBP eCLIP33.35■■■□□ 2.93
CAPN7-203ENST00000418994 FKBP5Q13451 457 aaPredicted RBP33.34■■■□□ 2.93
CAPN7-203ENST00000418994 DDX46Q7L014 1031 aaKnown RBP33.34■■■□□ 2.93
CAPN7-203ENST00000418994 PCCAP05165 728 aaPredicted RBP33.33■■■□□ 2.93
CAPN7-203ENST00000418994 IGKV5-2P06315 115 aa33.33■■■□□ 2.93
CAPN7-203ENST00000418994 SLFN5Q08AF3 891 aa33.33■■■□□ 2.93
CAPN7-203ENST00000418994 TIAM2Q8IVF5 1701 aa33.33■■■□□ 2.93
CAPN7-203ENST00000418994 HSP90B1P14625 803 aaKnown RBP33.32■■■□□ 2.92
CAPN7-203ENST00000418994 SF3B3Q15393 1217 aaKnown RBP33.32■■■□□ 2.92
CAPN7-203ENST00000418994 SNED1Q8TER0 1413 aa33.32■■■□□ 2.92
CAPN7-203ENST00000418994 DICER1Q9UPY3 1922 aaKnown RBP33.32■■■□□ 2.92
CAPN7-203ENST00000418994 KDM2BQ8NHM5 1336 aa33.31■■■□□ 2.92
CAPN7-203ENST00000418994 GRIPAP1Q4V328 841 aa33.31■■■□□ 2.92
CAPN7-203ENST00000418994 BBOX1O75936 387 aa33.3■■■□□ 2.92
CAPN7-203ENST00000418994 GRAPQ13588 217 aa33.29■■■□□ 2.92
CAPN7-203ENST00000418994 GRAPLQ8TC17 118 aaPredicted RBP33.29■■■□□ 2.92
CAPN7-203ENST00000418994 DNAAF4Q8WXU2 420 aa33.29■■■□□ 2.92
CAPN7-203ENST00000418994 PSMD1Q99460 953 aa33.29■■■□□ 2.92
CAPN7-203ENST00000418994 TMX4Q9H1E5 349 aaPredicted RBP33.29■■■□□ 2.92
CAPN7-203ENST00000418994 ZNF277Q9NRM2 450 aaPredicted RBP33.29■■■□□ 2.92
CAPN7-203ENST00000418994 ATP6V0A2Q9Y487 856 aa33.29■■■□□ 2.92
CAPN7-203ENST00000418994 NEURL1BA8MQ27 555 aa33.28■■■□□ 2.92
CAPN7-203ENST00000418994 CDCA7LQ96GN5 454 aa33.28■■■□□ 2.92
CAPN7-203ENST00000418994 NMRK2Q9NPI5 230 aa33.28■■■□□ 2.92
CAPN7-203ENST00000418994 KIF3CO14782 793 aa33.27■■■□□ 2.92
CAPN7-203ENST00000418994 CWF19L2Q2TBE0 894 aaKnown RBP33.27■■■□□ 2.92
CAPN7-203ENST00000418994 SLC51AQ86UW1 340 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms