RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 YBX3P16989 372 aaKnown RBP eCLIP23.9■■□□□ 1.42
PTCD3-204ENST00000418628 CCDC24Q8N4L8 307 aa23.9■■□□□ 1.42
PTCD3-204ENST00000418628 METTL22Q9BUU2 404 aaPredicted RBP23.9■■□□□ 1.42
PTCD3-204ENST00000418628 PI4KAP2A4QPH2 592 aa23.89■■□□□ 1.41
PTCD3-204ENST00000418628 CHRNA5P30532 468 aa23.89■■□□□ 1.41
PTCD3-204ENST00000418628 PPP1R42Q7Z4L9 355 aa23.89■■□□□ 1.41
PTCD3-204ENST00000418628 RIC3Q7Z5B4 369 aa23.89■■□□□ 1.41
PTCD3-204ENST00000418628 PI4KAP1Q8N8J0 262 aa23.89■■□□□ 1.41
PTCD3-204ENST00000418628 PDZRN3Q9UPQ7 1066 aa23.89■■□□□ 1.41
PTCD3-204ENST00000418628 LRRC37AA6NMS7 1700 aa23.88■■□□□ 1.41
PTCD3-204ENST00000418628 PDE6BP35913 854 aa23.88■■□□□ 1.41
PTCD3-204ENST00000418628 ALDH1L2Q3SY69 923 aa23.88■■□□□ 1.41
PTCD3-204ENST00000418628 NUTM1Q86Y26 1132 aa23.88■■□□□ 1.41
PTCD3-204ENST00000418628 MRPL50Q8N5N7 158 aaKnown RBP23.88■■□□□ 1.41
PTCD3-204ENST00000418628 MAP3K2Q9Y2U5 619 aa23.88■■□□□ 1.41
PTCD3-204ENST00000418628 CRY2Q49AN0 593 aa23.87■■□□□ 1.41
PTCD3-204ENST00000418628 ERFEQ4G0M1 354 aa23.87■■□□□ 1.41
PTCD3-204ENST00000418628 SSH1Q8WYL5 1049 aa23.87■■□□□ 1.41
PTCD3-204ENST00000418628 UTP14AQ9BVJ6 771 aaKnown RBP23.87■■□□□ 1.41
PTCD3-204ENST00000418628 FAM177BA6PVY3 158 aa23.86■■□□□ 1.41
PTCD3-204ENST00000418628 SLC10A5Q5PT55 438 aa23.86■■□□□ 1.41
PTCD3-204ENST00000418628 SPEF2Q9C093 1822 aa23.86■■□□□ 1.41
PTCD3-204ENST00000418628 ATP5J2-PTCD1G3V325 749 aa23.85■■□□□ 1.41
PTCD3-204ENST00000418628 IGKV5-2P06315 115 aa23.85■■□□□ 1.41
PTCD3-204ENST00000418628 SRGNP10124 158 aa23.85■■□□□ 1.41
PTCD3-204ENST00000418628 BRPF1P55201 1214 aaPredicted RBP23.85■■□□□ 1.41
PTCD3-204ENST00000418628 FKBP5Q13451 457 aaPredicted RBP23.85■■□□□ 1.41
PTCD3-204ENST00000418628 C2CD5Q86YS7 1000 aa23.85■■□□□ 1.41
PTCD3-204ENST00000418628 MYD88Q99836 296 aa23.85■■□□□ 1.41
PTCD3-204ENST00000418628 CCDC191Q8NCU4 936 aa23.84■■□□□ 1.41
PTCD3-204ENST00000418628 PIM2Q9P1W9 311 aa23.84■■□□□ 1.41
PTCD3-204ENST00000418628 SH3TC1Q8TE82 1336 aa23.84■■□□□ 1.41
PTCD3-204ENST00000418628 COL4A1P02462 1669 aa23.83■■□□□ 1.41
PTCD3-204ENST00000418628 H0YIN7 160 aa23.83■■□□□ 1.41
PTCD3-204ENST00000418628 NPHP1O15259 732 aa23.83■■□□□ 1.41
PTCD3-204ENST00000418628 DNAAF4Q8WXU2 420 aa23.83■■□□□ 1.41
PTCD3-204ENST00000418628 STYK1Q6J9G0 422 aa23.82■■□□□ 1.4
PTCD3-204ENST00000418628 C3orf67Q6ZVT6 689 aa23.81■■□□□ 1.4
PTCD3-204ENST00000418628 SYNE4Q8N205 404 aa23.81■■□□□ 1.4
PTCD3-204ENST00000418628 TRMT112Q9UI30 125 aaKnown RBP23.81■■□□□ 1.4
PTCD3-204ENST00000418628 PTPRCP08575 1304 aa23.81■■□□□ 1.4
PTCD3-204ENST00000418628 A0A1B0GUL6 1792 aa23.8■■□□□ 1.4
PTCD3-204ENST00000418628 NEURL1BA8MQ27 555 aa23.8■■□□□ 1.4
PTCD3-204ENST00000418628 GTF2E1P29083 439 aaPredicted RBP23.8■■□□□ 1.4
PTCD3-204ENST00000418628 RARSP54136 660 aaKnown RBP23.8■■□□□ 1.4
PTCD3-204ENST00000418628 GPR162Q16538 588 aa23.8■■□□□ 1.4
PTCD3-204ENST00000418628 TIAM2Q8IVF5 1701 aa23.8■■□□□ 1.4
PTCD3-204ENST00000418628 MASTLQ96GX5 879 aa23.8■■□□□ 1.4
PTCD3-204ENST00000418628 LTBP1Q14766 1721 aa23.79■■□□□ 1.4
PTCD3-204ENST00000418628 SNED1Q8TER0 1413 aa23.79■■□□□ 1.4
PTCD3-204ENST00000418628 DALRD3Q5D0E6 543 aaKnown RBP23.79■■□□□ 1.4
PTCD3-204ENST00000418628 ZBTB38Q8NAP3 1195 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-204ENST00000418628 BCL2L13Q9BXK5 485 aa23.79■■□□□ 1.4
PTCD3-204ENST00000418628 CWC25Q9NXE8 425 aaPredicted RBP23.79■■□□□ 1.4
PTCD3-204ENST00000418628 WWC3Q9ULE0 1092 aa23.79■■□□□ 1.4
PTCD3-204ENST00000418628 F6X3S4 739 aa23.78■■□□□ 1.4
PTCD3-204ENST00000418628 GRIN3BO60391 1043 aa23.78■■□□□ 1.4
PTCD3-204ENST00000418628 PCCAP05165 728 aaPredicted RBP23.78■■□□□ 1.4
PTCD3-204ENST00000418628 NPR1P16066 1061 aa23.78■■□□□ 1.4
PTCD3-204ENST00000418628 HOXA10P31260 410 aaPredicted RBP23.78■■□□□ 1.4
PTCD3-204ENST00000418628 NEXNQ0ZGT2 675 aa23.78■■□□□ 1.4
PTCD3-204ENST00000418628 CWF19L2Q2TBE0 894 aaKnown RBP23.78■■□□□ 1.4
PTCD3-204ENST00000418628 LINS1Q8NG48 757 aa23.78■■□□□ 1.4
PTCD3-204ENST00000418628 BCS1LQ9Y276 419 aa23.78■■□□□ 1.4
PTCD3-204ENST00000418628 CDHR2Q9BYE9 1310 aa23.78■■□□□ 1.4
PTCD3-204ENST00000418628 BEND3Q5T5X7 828 aa23.77■■□□□ 1.4
PTCD3-204ENST00000418628 TTLL6Q8N841 843 aa23.77■■□□□ 1.4
PTCD3-204ENST00000418628 FAM89AQ96GI7 184 aa23.77■■□□□ 1.4
PTCD3-204ENST00000418628 SMC4Q9NTJ3 1288 aa23.77■■□□□ 1.4
PTCD3-204ENST00000418628 DCAF8L1A6NGE4 600 aa23.76■■□□□ 1.39
PTCD3-204ENST00000418628 PELP1Q8IZL8 1130 aaKnown RBP23.76■■□□□ 1.39
PTCD3-204ENST00000418628 HCLS1P14317 486 aaPredicted RBP23.75■■□□□ 1.39
PTCD3-204ENST00000418628 GCKRQ14397 625 aa23.75■■□□□ 1.39
PTCD3-204ENST00000418628 CNKSR1Q969H4 720 aa23.75■■□□□ 1.39
PTCD3-204ENST00000418628 CASP7P55210 303 aa23.74■■□□□ 1.39
PTCD3-204ENST00000418628 PRPF40BQ6NWY9 871 aaKnown RBP23.74■■□□□ 1.39
PTCD3-204ENST00000418628 ZNF622Q969S3 477 aaKnown RBP eCLIP23.74■■□□□ 1.393e-8■■□□□ 11.8
PTCD3-204ENST00000418628 NLRP3Q96P20 1036 aa23.74■■□□□ 1.39
PTCD3-204ENST00000418628 C7orf43Q8WVR3 580 aa23.73■■□□□ 1.39
PTCD3-204ENST00000418628 KIF16BQ96L93 1317 aa23.73■■□□□ 1.39
PTCD3-204ENST00000418628 H7C1W4 665 aa23.72■■□□□ 1.39
PTCD3-204ENST00000418628 IRS4O14654 1257 aaPredicted RBP23.72■■□□□ 1.39
PTCD3-204ENST00000418628 SF3B3Q15393 1217 aaKnown RBP23.72■■□□□ 1.39
PTCD3-204ENST00000418628 CRAMP1Q96RY5 1269 aa23.72■■□□□ 1.39
PTCD3-204ENST00000418628 ALDH1L1O75891 902 aa23.71■■□□□ 1.39
PTCD3-204ENST00000418628 ABCC4O15439 1325 aa23.7■■□□□ 1.38
PTCD3-204ENST00000418628 DUOX1Q9NRD9 1551 aa23.69■■□□□ 1.38
PTCD3-204ENST00000418628 ALDH1B1P30837 517 aa23.69■■□□□ 1.38
PTCD3-204ENST00000418628 RTL5Q5HYW3 569 aaPredicted RBP23.69■■□□□ 1.38
PTCD3-204ENST00000418628 ARHGAP45Q92619 1136 aa23.69■■□□□ 1.38
PTCD3-204ENST00000418628 RPGRQ92834 1020 aaKnown RBP23.69■■□□□ 1.38
PTCD3-204ENST00000418628 PLA2G12BQ9BX93 195 aa23.69■■□□□ 1.38
PTCD3-204ENST00000418628 RTL9Q8NET4 1388 aa23.68■■□□□ 1.38
PTCD3-204ENST00000418628 SRCIN1Q9C0H9 1055 aa23.68■■□□□ 1.38
PTCD3-204ENST00000418628 NOB1Q9ULX3 412 aaKnown RBP23.68■■□□□ 1.38
PTCD3-204ENST00000418628 UTYO14607 1347 aa23.67■■□□□ 1.38
PTCD3-204ENST00000418628 PDE8AO60658 829 aa23.67■■□□□ 1.38
PTCD3-204ENST00000418628 BCAR3O75815 825 aa23.67■■□□□ 1.38
PTCD3-204ENST00000418628 HSP90B1P14625 803 aaKnown RBP23.67■■□□□ 1.38
PTCD3-204ENST00000418628 UBE3BQ7Z3V4 1068 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms