RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 PLA2G12BQ9BX93 195 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 SBF2Q86WG5 1849 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 MAP3K15Q6ZN16 1313 aa11.06□□□□□ -0.64
LINCMD1-201ENST00000418518 MYH7P12883 1935 aa11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 RFX7Q2KHR2 1363 aa11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 BTAF1O14981 1849 aa11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 K7ELQ4 463 aaPredicted RBP11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 ADAMTS2O95450 1211 aa11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 NFKBIBQ15653 356 aa11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 DDB1Q16531 1140 aa11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 DDX60Q8IY21 1712 aaKnown RBP11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 EAF2Q96CJ1 260 aaPredicted RBP11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 CIZ1Q9ULV3 898 aaPredicted RBP11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 CDHR2Q9BYE9 1310 aa11.05□□□□□ -0.64
LINCMD1-201ENST00000418518 SCN7AQ01118 1682 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 ZNF609O15014 1411 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 TRIM6-TRIM34B2RNG4 842 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 SGSM2O43147 1006 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 PCCAP05165 728 aaPredicted RBP11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 IFIT2P09913 472 aaKnown RBP11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 VPS72Q15906 364 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 HSP90AB3PQ58FF7 597 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 GIGYF2Q6Y7W6 1299 aaKnown RBP11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 KIF6Q6ZMV9 814 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 AACSQ86V21 672 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 ZBTB3Q9H5J0 574 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 GPR108Q9NPR9 543 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 SNRKQ9NRH2 765 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 TAF1LQ8IZX4 1826 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 RAD50Q92878 1312 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 LY75O60449 1722 aa11.04□□□□□ -0.64
LINCMD1-201ENST00000418518 ERVV-1B6SEH8 477 aa11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 CD2BP2O95400 341 aaKnown RBP11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 IL6STP40189 918 aaPredicted RBP11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 PRIM1P49642 420 aaKnown RBP11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 NBR1Q14596 966 aa11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 RTL5Q5HYW3 569 aaPredicted RBP11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 MARCH10Q8NA82 808 aaPredicted RBP11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 RILPL2Q969X0 211 aa11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 RBM42Q9BTD8 480 aaKnown RBP11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 FBXO3Q9UK99 471 aa11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 SPATA31A6Q5VVP1 1343 aa11.03□□□□□ -0.64
LINCMD1-201ENST00000418518 CIAO1O76071 339 aa11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 LMBR1LQ6UX01 489 aa11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 ATG9AQ7Z3C6 839 aa11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 TICAM2Q86XR7 235 aa11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 FNBP4Q8N3X1 1017 aaPredicted RBP11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 EVI5LQ96CN4 794 aa11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 BCL11AQ9H165 835 aa11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 SLKQ9H2G2 1235 aaPredicted RBP11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 ZBTB1Q9Y2K1 713 aa11.02□□□□□ -0.65
LINCMD1-201ENST00000418518 AKAP11Q9UKA4 1901 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 COL24A1Q17RW2 1714 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 A0A1B0GUL6 1792 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 UBAP1LF5GYI3 381 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 HIP1O00291 1037 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 ATP5JP18859 108 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 MCCP23508 829 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 PIP4K2BP78356 416 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 TNNI3KQ59H18 835 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 ZBTB38Q8NAP3 1195 aaPredicted RBP11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 KLHDC4Q8TBB5 520 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 LSG1Q9H089 658 aaKnown RBP11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 SIL1Q9H173 461 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 IL25Q9H293 177 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 FPGT-TNNI3KV9GXZ4 949 aa11.01□□□□□ -0.65
LINCMD1-201ENST00000418518 NUTM2BA6NNL0 878 aaPredicted RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 NUTM2EB1AL46 878 aaPredicted RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 CSF1RP07333 972 aa11□□□□□ -0.65
LINCMD1-201ENST00000418518 HSPA4P34932 840 aa11□□□□□ -0.65
LINCMD1-201ENST00000418518 IL15P40933 162 aaPredicted RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 EIF5P55010 431 aaKnown RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 NLRP10Q86W26 655 aa11□□□□□ -0.65
LINCMD1-201ENST00000418518 NUTM2AQ8IVF1 878 aaPredicted RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 RUFY2Q8WXA3 655 aa11□□□□□ -0.65
LINCMD1-201ENST00000418518 JARID2Q92833 1246 aaPredicted RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 SMARCC1Q92922 1105 aaPredicted RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 KCNB2Q92953 911 aa11□□□□□ -0.65
LINCMD1-201ENST00000418518 TLR7Q9NYK1 1049 aaKnown RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 DBNLQ9UJU6 430 aaKnown RBP11□□□□□ -0.65
LINCMD1-201ENST00000418518 PALLDQ8WX93 1383 aa11□□□□□ -0.65
LINCMD1-201ENST00000418518 MED23Q9ULK4 1368 aa11□□□□□ -0.65
LINCMD1-201ENST00000418518 EYA2O00167 538 aa10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 RGL2O15211 777 aa10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 ST18O60284 1047 aa10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 TFCP2Q12800 502 aa10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 INTS5Q6P9B9 1019 aaKnown RBP10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 CCDC8Q9H0W5 538 aaPredicted RBP10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 ANO2Q9NQ90 1003 aa10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 CCDC87Q9NVE4 849 aa10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 RIC1Q4ADV7 1423 aa10.99□□□□□ -0.65
LINCMD1-201ENST00000418518 LOC102724428A0A0B4J2F2 783 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 MAP4K4O95819 1239 aaPredicted RBP10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 MCM2P49736 904 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 SIK1P57059 783 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 HLFQ16534 295 aa10.98□□□□□ -0.65
LINCMD1-201ENST00000418518 ZNF34Q8IZ26 560 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms