RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ANKRD24Q8TF21 1146 aa12.92□□□□□ -0.34
PTCH1-205ENST00000418258 WDR97A6NE52 1622 aa12.92□□□□□ -0.34
PTCH1-205ENST00000418258 TMCO5BA8MYB1 307 aa12.92□□□□□ -0.34
PTCH1-205ENST00000418258 NOP2P46087 812 aaKnown RBP12.92□□□□□ -0.34
PTCH1-205ENST00000418258 UBXN4Q92575 508 aa12.92□□□□□ -0.34
PTCH1-205ENST00000418258 LARP6Q9BRS8 491 aaKnown RBP12.92□□□□□ -0.34
PTCH1-205ENST00000418258 SCAND2PQ9GZW5 306 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-205ENST00000418258 TOM1O60784 492 aa12.91□□□□□ -0.34
PTCH1-205ENST00000418258 FBXO31Q5XUX0 539 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-205ENST00000418258 ZGPATQ8N5A5 531 aaKnown RBP12.91□□□□□ -0.34
PTCH1-205ENST00000418258 CPLX3Q8WVH0 158 aa12.91□□□□□ -0.34
PTCH1-205ENST00000418258 SSH1Q8WYL5 1049 aa12.91□□□□□ -0.34
PTCH1-205ENST00000418258 UBA7P41226 1012 aa12.91□□□□□ -0.34
PTCH1-205ENST00000418258 METAP2P50579 478 aaKnown RBP eCLIP12.91□□□□□ -0.34
PTCH1-205ENST00000418258 SLFN5Q08AF3 891 aa12.91□□□□□ -0.34
PTCH1-205ENST00000418258 EMILIN1Q9Y6C2 1016 aa12.91□□□□□ -0.34
PTCH1-205ENST00000418258 NKTRP30414 1462 aaKnown RBP12.91□□□□□ -0.34
PTCH1-205ENST00000418258 PICALMQ13492 652 aa12.91□□□□□ -0.34
PTCH1-205ENST00000418258 KIF4BQ2VIQ3 1234 aa12.91□□□□□ -0.34
PTCH1-205ENST00000418258 JARID2Q92833 1246 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-205ENST00000418258 UQCRHLA0A096LP55 91 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 UQCRHP07919 91 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 LRSAM1Q6UWE0 723 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 SLC26A6Q9BXS9 759 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 PAFAH1B1P43034 410 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 CCDC183Q5T5S1 534 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 TMCO3Q6UWJ1 677 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 TMX1Q9H3N1 280 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 YEATS4O95619 227 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 IARSP41252 1262 aaKnown RBP12.9□□□□□ -0.34
PTCH1-205ENST00000418258 FLIIQ13045 1269 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 IFIT1BQ5T764 474 aaKnown RBP12.9□□□□□ -0.34
PTCH1-205ENST00000418258 STX6O43752 255 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 TBCAO75347 108 aaKnown RBP12.9□□□□□ -0.34
PTCH1-205ENST00000418258 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
PTCH1-205ENST00000418258 PTPN14Q15678 1187 aa12.9□□□□□ -0.34
PTCH1-205ENST00000418258 VEZTQ9HBM0 779 aa12.9□□□□□ -0.35
PTCH1-205ENST00000418258 MCM3P25205 808 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 TSNARE1Q96NA8 513 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 POLD1P28340 1107 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 FAM114A1Q8IWE2 563 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 USP16Q9Y5T5 823 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 FSIP1Q8NA03 581 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 BACH2Q9BYV9 841 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 GBP3Q9H0R5 595 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
PTCH1-205ENST00000418258 CTAGE5O15320 804 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 NCBP1Q09161 790 aaKnown RBP12.89□□□□□ -0.35
PTCH1-205ENST00000418258 RBM26Q5T8P6 1007 aaKnown RBP12.89□□□□□ -0.35
PTCH1-205ENST00000418258 PCF11O94913 1555 aaKnown RBP12.89□□□□□ -0.35
PTCH1-205ENST00000418258 PHACTR2O75167 634 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 TBC1D5Q92609 795 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 EXOC1Q9NV70 894 aa12.89□□□□□ -0.35
PTCH1-205ENST00000418258 PLEKHH1Q9ULM0 1364 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 ISM2Q6H9L7 571 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 RAB11FIP4Q86YS3 637 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 NCOA7Q8NI08 942 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 ALS2CR12Q96Q35 445 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 LIMCH1Q9UPQ0 1083 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 HLTFQ14527 1009 aaKnown RBP eCLIP12.88□□□□□ -0.35
PTCH1-205ENST00000418258 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 CEP63Q96MT8 703 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 PANK2Q9BZ23 570 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 ABCC11Q96J66 1382 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 ZCRB1Q8TBF4 217 aaKnown RBP12.88□□□□□ -0.35
PTCH1-205ENST00000418258 LRRC45Q96CN5 670 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 ACTN2P35609 894 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 ERMNQ8TAM6 284 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 NLRP3Q96P20 1036 aa12.88□□□□□ -0.35
PTCH1-205ENST00000418258 BIN1O00499 593 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 HEATR3Q7Z4Q2 680 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 PPM1EQ8WY54 764 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 PYM1Q9BRP8 204 aaKnown RBP12.87□□□□□ -0.35
PTCH1-205ENST00000418258 PI4KAP2A4QPH2 592 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 FERP16591 822 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 ZNF804AQ7Z570 1209 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 PI4KAP1Q8N8J0 262 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 CYP7A1P22680 504 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 ARL1P40616 181 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-205ENST00000418258 WTAPQ15007 396 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 LRRC27Q9C0I9 530 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 BIN2Q9UBW5 565 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-205ENST00000418258 CLIP2Q9UDT6 1046 aa12.87□□□□□ -0.35
PTCH1-205ENST00000418258 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-205ENST00000418258 URI1O94763 535 aaPredicted RBP12.87□□□□□ -0.35
PTCH1-205ENST00000418258 FSD2A1L4K1 749 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 ANKRD13DQ6ZTN6 518 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 TFCP2L1Q9NZI6 479 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 KIF18AQ8NI77 898 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 NYXQ9GZU5 481 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 ERICH4A6NGS2 130 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 NAA15Q9BXJ9 866 aaKnown RBP12.86□□□□□ -0.35
PTCH1-205ENST00000418258 PARP3Q9Y6F1 533 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 IKBKGQ9Y6K9 419 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 PIK3R4Q99570 1358 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 SHTN1A0MZ66 631 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 LMOD1P29536 600 aaPredicted RBP12.86□□□□□ -0.35
PTCH1-205ENST00000418258 DPH6Q7L8W6 267 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 NIP7Q9Y221 180 aaKnown RBP eCLIP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms