RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 ALDH1L2Q3SY69 923 aa9.81□□□□□ -0.84
SHPRH-204ENST00000417762 SSH1Q8WYL5 1049 aa9.81□□□□□ -0.84
SHPRH-204ENST00000417762 ZNF428Q96B54 188 aa9.81□□□□□ -0.84
SHPRH-204ENST00000417762 LAS1LQ9Y4W2 734 aaKnown RBP9.81□□□□□ -0.84
SHPRH-204ENST00000417762 NFAT5O94916 1531 aa9.81□□□□□ -0.84
SHPRH-204ENST00000417762 VAMP4O75379 141 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 GCP02774 474 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 MS4A1P11836 297 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 BRPF1P55201 1214 aaPredicted RBP9.8□□□□□ -0.84
SHPRH-204ENST00000417762 XPCQ01831 940 aaPredicted RBP9.8□□□□□ -0.84
SHPRH-204ENST00000417762 AAMPQ13685 434 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 DCTN1Q14203 1278 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 MTHFSDQ2M296 383 aaKnown RBP9.8□□□□□ -0.84
SHPRH-204ENST00000417762 ZKSCAN2Q63HK3 967 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 ARHGEF25Q86VW2 580 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 PANK1Q8TE04 598 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 MRGPRX2Q96LB1 330 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 BCL2L13Q9BXK5 485 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 MBIPQ9NS73 344 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 KIF1AQ12756 1690 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 USP19O94966 1318 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
SHPRH-204ENST00000417762 SLIT3O75094 1523 aa9.79□□□□□ -0.84
SHPRH-204ENST00000417762 CHL1O00533 1208 aa9.79□□□□□ -0.84
SHPRH-204ENST00000417762 HTATSF1O43719 755 aaKnown RBP9.79□□□□□ -0.84
SHPRH-204ENST00000417762 RLBP1P12271 317 aa9.79□□□□□ -0.84
SHPRH-204ENST00000417762 MDM2Q00987 491 aaPredicted RBP9.79□□□□□ -0.84
SHPRH-204ENST00000417762 GAS2L2Q8NHY3 880 aa9.79□□□□□ -0.84
SHPRH-204ENST00000417762 REPIN1Q9BWE0 567 aaKnown RBP9.79□□□□□ -0.84
SHPRH-204ENST00000417762 SMC4Q9NTJ3 1288 aa9.79□□□□□ -0.84
SHPRH-204ENST00000417762 TNNQ9UQP3 1299 aa9.79□□□□□ -0.84
SHPRH-204ENST00000417762 COG6Q9Y2V7 657 aa9.79□□□□□ -0.84
SHPRH-204ENST00000417762 DLG5Q8TDM6 1919 aa9.79□□□□□ -0.84
SHPRH-204ENST00000417762 STRCQ7RTU9 1775 aa9.78□□□□□ -0.84
SHPRH-204ENST00000417762 CENPQQ7L2Z9 268 aaPredicted RBP9.78□□□□□ -0.84
SHPRH-204ENST00000417762 LTV1Q96GA3 475 aaPredicted RBP9.78□□□□□ -0.84
SHPRH-204ENST00000417762 RBM19Q9Y4C8 960 aaKnown RBP9.78□□□□□ -0.84
SHPRH-204ENST00000417762 TRPM3Q9HCF6 1732 aaPredicted RBP9.78□□□□□ -0.84
SHPRH-204ENST00000417762 MSH6P52701 1360 aa9.77□□□□□ -0.84
SHPRH-204ENST00000417762 CRB1P82279 1406 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 J3QL48 77 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 TULP1O00294 542 aaPredicted RBP9.77□□□□□ -0.85
SHPRH-204ENST00000417762 IPO8O15397 1037 aaKnown RBP9.77□□□□□ -0.85
SHPRH-204ENST00000417762 HOXA2O43364 376 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 WFS1O76024 890 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 MCM10Q7L590 875 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 DZIP1LQ8IYY4 767 aaKnown RBP9.77□□□□□ -0.85
SHPRH-204ENST00000417762 TSPYL6Q8N831 410 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 C8orf58Q8NAV2 365 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 HLA-CQ95604 372 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 CLUAP1Q96AJ1 413 aa9.77□□□□□ -0.85
SHPRH-204ENST00000417762 NOB1Q9ULX3 412 aaKnown RBP9.77□□□□□ -0.85
SHPRH-204ENST00000417762 PHRF1Q9P1Y6 1649 aaKnown RBP9.76□□□□□ -0.85
SHPRH-204ENST00000417762 TCERG1O14776 1098 aaKnown RBP9.76□□□□□ -0.85
SHPRH-204ENST00000417762 TRIM27P14373 513 aa9.76□□□□□ -0.85
SHPRH-204ENST00000417762 TWISTNBQ3B726 338 aaPredicted RBP9.76□□□□□ -0.85
SHPRH-204ENST00000417762 NBPF6Q5VWK0 638 aa9.76□□□□□ -0.85
SHPRH-204ENST00000417762 ATF7IPQ6VMQ6 1270 aa9.76□□□□□ -0.85
SHPRH-204ENST00000417762 RTF1Q92541 710 aaKnown RBP9.76□□□□□ -0.85
SHPRH-204ENST00000417762 NBPF4Q96M43 638 aa9.76□□□□□ -0.85
SHPRH-204ENST00000417762 ATP13A2Q9NQ11 1180 aa9.76□□□□□ -0.85
SHPRH-204ENST00000417762 NPHP3Q7Z494 1330 aa9.76□□□□□ -0.85
SHPRH-204ENST00000417762 KIF16BQ96L93 1317 aa9.76□□□□□ -0.85
SHPRH-204ENST00000417762 LTN1O94822 1766 aa9.75□□□□□ -0.85
SHPRH-204ENST00000417762 GNAT3A8MTJ3 354 aa9.75□□□□□ -0.85
SHPRH-204ENST00000417762 WNT7BP56706 349 aa9.75□□□□□ -0.85
SHPRH-204ENST00000417762 MVPQ14764 893 aaKnown RBP9.75□□□□□ -0.85
SHPRH-204ENST00000417762 ARHGAP45Q92619 1136 aa9.75□□□□□ -0.85
SHPRH-204ENST00000417762 DDX17Q92841 729 aaKnown RBP9.75□□□□□ -0.85
SHPRH-204ENST00000417762 KIAA0232Q92628 1395 aa9.75□□□□□ -0.85
SHPRH-204ENST00000417762 ZBTB7CA1YPR0 619 aa9.74□□□□□ -0.85
SHPRH-204ENST00000417762 ELL2O00472 640 aaPredicted RBP9.74□□□□□ -0.85
SHPRH-204ENST00000417762 IGHDP01880 384 aa9.74□□□□□ -0.85
SHPRH-204ENST00000417762 FTSJ3Q8IY81 847 aaKnown RBP9.74□□□□□ -0.85
SHPRH-204ENST00000417762 CCDC24Q8N4L8 307 aa9.74□□□□□ -0.85
SHPRH-204ENST00000417762 CCDC102AQ96A19 550 aa9.74□□□□□ -0.85
SHPRH-204ENST00000417762 ZNF335Q9H4Z2 1342 aaPredicted RBP9.74□□□□□ -0.85
SHPRH-204ENST00000417762 ALS2Q96Q42 1657 aa9.74□□□□□ -0.85
SHPRH-204ENST00000417762 XIRP1Q702N8 1843 aaKnown RBP9.73□□□□□ -0.85
SHPRH-204ENST00000417762 SKOR1P84550 965 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 NFX1Q12986 1120 aaKnown RBP9.73□□□□□ -0.85
SHPRH-204ENST00000417762 RC3H1Q5TC82 1133 aaKnown RBP9.73□□□□□ -0.85
SHPRH-204ENST00000417762 BRINP3Q76B58 766 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 USHBP1Q8N6Y0 703 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 IL17REQ8NFR9 667 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 ANKRD24Q8TF21 1146 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 LRRC59Q96AG4 307 aaKnown RBP9.73□□□□□ -0.85
SHPRH-204ENST00000417762 BABAM1Q9NWV8 329 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 PCDHB15Q9Y5E8 787 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 SPATA31A3Q5VYP0 1347 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 NCAPD2Q15021 1401 aa9.73□□□□□ -0.85
SHPRH-204ENST00000417762 MED1Q15648 1581 aaPredicted RBP9.72□□□□□ -0.85
SHPRH-204ENST00000417762 JUNDP17535 347 aa9.72□□□□□ -0.85
SHPRH-204ENST00000417762 CLCN1P35523 988 aa9.72□□□□□ -0.85
SHPRH-204ENST00000417762 GUCA2AQ02747 115 aa9.72□□□□□ -0.85
SHPRH-204ENST00000417762 TMEM57Q8N5G2 664 aa9.72□□□□□ -0.85
SHPRH-204ENST00000417762 HPS1Q92902 700 aa9.72□□□□□ -0.85
SHPRH-204ENST00000417762 TRIM47Q96LD4 638 aa9.72□□□□□ -0.85
SHPRH-204ENST00000417762 SENP2Q9HC62 589 aa9.72□□□□□ -0.85
SHPRH-204ENST00000417762 GPCPD1Q9NPB8 672 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms