RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 TMEM132EQ6IEE7 984 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 SPATA31E1Q6ZUB1 1445 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 ZFRQ96KR1 1074 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 TRIM34Q9BYJ4 488 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 NBPF3Q9H094 633 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 SERPINA10Q9UK55 444 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 PRR36Q9H6K5 1346 aa7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 ZC3H4Q9UPT8 1303 aaKnown RBP7.99□□□□□ -1.13
ECHDC1-206ENST00000417628 ZBTB7CA1YPR0 619 aa7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 POM121CA8CG34 1229 aa7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 GPR37L1O60883 481 aa7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 ATP6V1AP38606 617 aa7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 SLC4A3P48751 1232 aa7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 SAFB2Q14151 953 aaKnown RBP eCLIP7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 FLAD1Q8NFF5 587 aa7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 SYMPKQ92797 1274 aaKnown RBP7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 HS3ST6Q96QI5 342 aa7.98□□□□□ -1.13
ECHDC1-206ENST00000417628 PPIP5K1Q6PFW1 1433 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 C6orf229H3BNL8 230 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 IRF5Q13568 498 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 GRIPAP1Q4V328 841 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 NBPF15Q8N660 670 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 SLC17A8Q8NDX2 589 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 LRRN4Q8WUT4 740 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 CCDC97Q96F63 343 aaPredicted RBP7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 PRAM1Q96QH2 718 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 PRM3Q9NNZ6 103 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 KIAA1551Q9HCM1 1747 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 ADGRF5Q8IZF2 1346 aa7.97□□□□□ -1.13
ECHDC1-206ENST00000417628 USP54Q70EL1 1684 aa7.96□□□□□ -1.13
ECHDC1-206ENST00000417628 RNF40O75150 1001 aa7.96□□□□□ -1.14
ECHDC1-206ENST00000417628 GCP02774 474 aa7.96□□□□□ -1.14
ECHDC1-206ENST00000417628 FXR1P51114 621 aaKnown RBP eCLIP7.96□□□□□ -1.14
ECHDC1-206ENST00000417628 MORN1Q5T089 497 aa7.96□□□□□ -1.14
ECHDC1-206ENST00000417628 CARD10Q9BWT7 1032 aa7.96□□□□□ -1.14
ECHDC1-206ENST00000417628 CCNL1Q9UK58 526 aaPredicted RBP7.96□□□□□ -1.14
ECHDC1-206ENST00000417628 NDUFB9Q9Y6M9 179 aa7.96□□□□□ -1.14
ECHDC1-206ENST00000417628 CCDC7Q96M83 1385 aa7.96□□□□□ -1.14
ECHDC1-206ENST00000417628 LY75O60449 1722 aa7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 ITSN1Q15811 1721 aa7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 GLTPD2A6NH11 291 aa7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 TGFB2P61812 414 aa7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 DGKZQ13574 1117 aa7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 ADGRD1Q6QNK2 874 aa7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 MRPL50Q8N5N7 158 aaKnown RBP7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 HELBQ8NG08 1087 aaPredicted RBP7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 THSD7BQ9C0I4 1608 aa7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 ADAMTS7Q9UKP4 1686 aa7.95□□□□□ -1.14
ECHDC1-206ENST00000417628 A0A0G2JLW4 131 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 TMEM88BA6NKF7 163 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 HRO43593 1189 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 ACTN4O43707 911 aaKnown RBP7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 LSM11P83369 360 aaKnown RBP eCLIP7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 KMT5BQ4FZB7 885 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 WWC1Q8IX03 1113 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 ABTB2Q8N961 1025 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 EPS8L1Q8TE68 723 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 TSC1Q92574 1164 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 PIK3C2GO75747 1445 aa7.94□□□□□ -1.14
ECHDC1-206ENST00000417628 N4BP2Q86UW6 1770 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 CSB-PGBD3P0DP91 1061 aa7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 TRIM26Q12899 539 aaPredicted RBP7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 PUS10Q3MIT2 529 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 NLRP13Q86W25 1043 aa7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 PRR7Q8TB68 274 aa7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 LRCH3Q96II8 777 aa7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 SLC27A5Q9Y2P5 690 aa7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 KIF13BQ9NQT8 1826 aa7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 PASKQ96RG2 1323 aa7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 WDR33Q9C0J8 1336 aaKnown RBP7.93□□□□□ -1.14
ECHDC1-206ENST00000417628 LTBP1Q14766 1721 aa7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 RASSF10A6NK89 507 aa7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 EIF5BO60841 1220 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 MPNDQ8N594 471 aa7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 ADAMTS19Q8TE59 1207 aa7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 GLMNQ92990 594 aa7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 CALR3Q96L12 384 aaKnown RBP7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 POGKQ9P215 609 aa7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 C5P01031 1676 aa7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 ARFGEF1Q9Y6D6 1849 aa7.92□□□□□ -1.14
ECHDC1-206ENST00000417628 PER1O15534 1290 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 ZEB1P37275 1124 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 DEFB115Q30KQ5 88 aa7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 RETREG3Q86VR2 466 aa7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 DCAF5Q96JK2 942 aa7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 POLR3AO14802 1390 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 KDM6AO15550 1401 aaPredicted RBP7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 CPSF1Q10570 1443 aaKnown RBP7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 NSD3Q9BZ95 1437 aa7.91□□□□□ -1.14
ECHDC1-206ENST00000417628 SLIT3O75094 1523 aa7.9□□□□□ -1.14
ECHDC1-206ENST00000417628 NSD2O96028 1365 aa7.9□□□□□ -1.14
ECHDC1-206ENST00000417628 DPEP1P16444 411 aa7.9□□□□□ -1.14
ECHDC1-206ENST00000417628 HMGB2P26583 209 aaKnown RBP7.9□□□□□ -1.14
ECHDC1-206ENST00000417628 SYTL4Q96C24 671 aaPredicted RBP7.9□□□□□ -1.14
ECHDC1-206ENST00000417628 BRCA1P38398 1863 aaKnown RBP7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 TIAM2Q8IVF5 1701 aa7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 ROCK1Q13464 1354 aa7.89□□□□□ -1.15
ECHDC1-206ENST00000417628 ANKRD36BQ8N2N9 1353 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms