RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 C9orf131Q5VYM1 1079 aa13.28□□□□□ -0.28
HDLBP-206ENST00000417540 CACNA1FO60840 1977 aa13.28□□□□□ -0.28
HDLBP-206ENST00000417540 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.29
HDLBP-206ENST00000417540 H0YIN7 160 aa13.27□□□□□ -0.29
HDLBP-206ENST00000417540 TTLL6Q8N841 843 aa13.27□□□□□ -0.29
HDLBP-206ENST00000417540 RNF181Q9P0P0 153 aa13.27□□□□□ -0.29
HDLBP-206ENST00000417540 ZNF521Q96K83 1311 aa13.27□□□□□ -0.29
HDLBP-206ENST00000417540 RGL2O15211 777 aa13.26□□□□□ -0.29
HDLBP-206ENST00000417540 PDE6BP35913 854 aa13.26□□□□□ -0.29
HDLBP-206ENST00000417540 G2E3Q7L622 706 aa13.26□□□□□ -0.29
HDLBP-206ENST00000417540 NLRP10Q86W26 655 aa13.26□□□□□ -0.29
HDLBP-206ENST00000417540 WDR90Q96KV7 1748 aa13.26□□□□□ -0.29
HDLBP-206ENST00000417540 GPBP1L1Q9HC44 474 aaPredicted RBP13.26□□□□□ -0.29
HDLBP-206ENST00000417540 HSPA6P17066 643 aa13.25□□□□□ -0.29
HDLBP-206ENST00000417540 ZNF646O15015 1829 aaPredicted RBP13.25□□□□□ -0.29
HDLBP-206ENST00000417540 ABCC4O15439 1325 aa13.24□□□□□ -0.29
HDLBP-206ENST00000417540 IL16Q14005 1332 aa13.24□□□□□ -0.29
HDLBP-206ENST00000417540 KLRG2A4D1S0 409 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-206ENST00000417540 HCLS1P14317 486 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-206ENST00000417540 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
HDLBP-206ENST00000417540 CRY2Q49AN0 593 aa13.24□□□□□ -0.29
HDLBP-206ENST00000417540 RTL5Q5HYW3 569 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-206ENST00000417540 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
HDLBP-206ENST00000417540 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
HDLBP-206ENST00000417540 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
HDLBP-206ENST00000417540 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
HDLBP-206ENST00000417540 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
HDLBP-206ENST00000417540 MYD88Q99836 296 aa13.23□□□□□ -0.29
HDLBP-206ENST00000417540 ISCA1Q9BUE6 129 aa13.23□□□□□ -0.29
HDLBP-206ENST00000417540 NMRK2Q9NPI5 230 aa13.23□□□□□ -0.29
HDLBP-206ENST00000417540 KIF3CO14782 793 aa13.22□□□□□ -0.29
HDLBP-206ENST00000417540 NPR1P16066 1061 aa13.22□□□□□ -0.29
HDLBP-206ENST00000417540 TCIRG1Q13488 830 aa13.22□□□□□ -0.29
HDLBP-206ENST00000417540 TPTE2Q6XPS3 522 aa13.22□□□□□ -0.29
HDLBP-206ENST00000417540 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
HDLBP-206ENST00000417540 JARID2Q92833 1246 aaPredicted RBP13.22□□□□□ -0.29
HDLBP-206ENST00000417540 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
HDLBP-206ENST00000417540 GTF2E1P29083 439 aaPredicted RBP13.21□□□□□ -0.29
HDLBP-206ENST00000417540 GOLGA2Q08379 1002 aa13.21□□□□□ -0.29
HDLBP-206ENST00000417540 PARP10Q53GL7 1025 aa13.21□□□□□ -0.29
HDLBP-206ENST00000417540 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
HDLBP-206ENST00000417540 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
HDLBP-206ENST00000417540 ADAMTSL1Q8N6G6 1762 aa13.21□□□□□ -0.29
HDLBP-206ENST00000417540 PCNTO95613 3336 aa13.2□□□□□ -0.3
HDLBP-206ENST00000417540 ZNF541Q9H0D2 1346 aa13.2□□□□□ -0.3
HDLBP-206ENST00000417540 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
HDLBP-206ENST00000417540 PPEF1O14829 653 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-206ENST00000417540 CNKSR1Q969H4 720 aa13.2□□□□□ -0.3
HDLBP-206ENST00000417540 TAOK3Q9H2K8 898 aa13.2□□□□□ -0.3
HDLBP-206ENST00000417540 ZNF277Q9NRM2 450 aaPredicted RBP13.2□□□□□ -0.3
HDLBP-206ENST00000417540 HYPKQ9NX55 129 aa13.2□□□□□ -0.3
HDLBP-206ENST00000417540 SH3TC1Q8TE82 1336 aa13.19□□□□□ -0.3
HDLBP-206ENST00000417540 IGKV5-2P06315 115 aa13.19□□□□□ -0.3
HDLBP-206ENST00000417540 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
HDLBP-206ENST00000417540 HSP90AB3PQ58FF7 597 aa13.19□□□□□ -0.3
HDLBP-206ENST00000417540 ANKRD13DQ6ZTN6 518 aa13.19□□□□□ -0.3
HDLBP-206ENST00000417540 PPP1R42Q7Z4L9 355 aa13.19□□□□□ -0.3
HDLBP-206ENST00000417540 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
HDLBP-206ENST00000417540 FAM89AQ96GI7 184 aa13.19□□□□□ -0.3
HDLBP-206ENST00000417540 TRMT112Q9UI30 125 aaKnown RBP13.19□□□□□ -0.3
HDLBP-206ENST00000417540 MAP3K2Q9Y2U5 619 aa13.19□□□□□ -0.3
HDLBP-206ENST00000417540 PSME4Q14997 1843 aa13.18□□□□□ -0.3
HDLBP-206ENST00000417540 LMNB1P20700 586 aa13.18□□□□□ -0.3
HDLBP-206ENST00000417540 CWF19L2Q2TBE0 894 aaKnown RBP13.18□□□□□ -0.3
HDLBP-206ENST00000417540 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
HDLBP-206ENST00000417540 RIC3Q7Z5B4 369 aa13.18□□□□□ -0.3
HDLBP-206ENST00000417540 WDR63Q8IWG1 891 aa13.18□□□□□ -0.3
HDLBP-206ENST00000417540 MIER1Q8N108 512 aa13.18□□□□□ -0.3
HDLBP-206ENST00000417540 CDCA7LQ96GN5 454 aa13.18□□□□□ -0.3
HDLBP-206ENST00000417540 LTBP3Q9NS15 1303 aa13.17□□□□□ -0.3
HDLBP-206ENST00000417540 FLIIQ13045 1269 aa13.17□□□□□ -0.3
HDLBP-206ENST00000417540 DNAJC5GQ8N7S2 189 aa13.17□□□□□ -0.3
HDLBP-206ENST00000417540 CCDC85AQ96PX6 553 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-206ENST00000417540 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
HDLBP-206ENST00000417540 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
HDLBP-206ENST00000417540 PI4KAP2A4QPH2 592 aa13.16□□□□□ -0.3
HDLBP-206ENST00000417540 F6X3S4 739 aa13.16□□□□□ -0.3
HDLBP-206ENST00000417540 VAMP4O75379 141 aa13.16□□□□□ -0.3
HDLBP-206ENST00000417540 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
HDLBP-206ENST00000417540 PI4KAP1Q8N8J0 262 aa13.16□□□□□ -0.3
HDLBP-206ENST00000417540 CELF1Q92879 486 aaKnown RBP13.16□□□□□ -0.3
HDLBP-206ENST00000417540 SCN4AP35499 1836 aa13.16□□□□□ -0.3
HDLBP-206ENST00000417540 CCER2I3L3R5 266 aa13.15□□□□□ -0.3
HDLBP-206ENST00000417540 HOXA10P31260 410 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-206ENST00000417540 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■□□□ 12.2
HDLBP-206ENST00000417540 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-206ENST00000417540 METTL22Q9BUU2 404 aaPredicted RBP13.15□□□□□ -0.3
HDLBP-206ENST00000417540 BCL2L13Q9BXK5 485 aa13.15□□□□□ -0.3
HDLBP-206ENST00000417540 STK31Q9BXU1 1019 aa13.15□□□□□ -0.3
HDLBP-206ENST00000417540 IRS4O14654 1257 aaPredicted RBP13.14□□□□□ -0.31
HDLBP-206ENST00000417540 HTRA3P83110 453 aa13.14□□□□□ -0.31
HDLBP-206ENST00000417540 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
HDLBP-206ENST00000417540 SEC31BQ9NQW1 1179 aa13.14□□□□□ -0.31
HDLBP-206ENST00000417540 NEURL1BA8MQ27 555 aa13.13□□□□□ -0.31
HDLBP-206ENST00000417540 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
HDLBP-206ENST00000417540 FKBP5Q13451 457 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-206ENST00000417540 GRAPQ13588 217 aa13.13□□□□□ -0.31
HDLBP-206ENST00000417540 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
HDLBP-206ENST00000417540 GRAPLQ8TC17 118 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-206ENST00000417540 RBM17Q96I25 401 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms