RNA–Protein interactions for RNA: ENST00000417487.1

PDCL3P3-201, Transcript of phosducin-like 3 pseudogene 3, humanhuman

BASIC

Gene PDCL3P3, Length 715 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3P3-201ENST00000417487 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 SUSD4Q5VX71 490 aa13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 UBE3BQ7Z3V4 1068 aa13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 PPP1R42Q7Z4L9 355 aa13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 SSH3Q8TE77 659 aa13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 DCTPP1Q9H773 170 aa13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 SRP68Q9UHB9 627 aaKnown RBP13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 NIP7Q9Y221 180 aaKnown RBP eCLIP13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 MYH14Q7Z406 1995 aaKnown RBP13.06□□□□□ -0.32
PDCL3P3-201ENST00000417487 C4BP0C0L5 1744 aa13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 PHF14O94880 888 aa13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 POLA2Q14181 598 aa13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 RABL6Q3YEC7 729 aaPredicted RBP13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 SMC5Q8IY18 1101 aa13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 JARID2Q92833 1246 aaPredicted RBP13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 UTP14AQ9BVJ6 771 aaKnown RBP13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 PLA2G12BQ9BX93 195 aa13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 UBN2Q6ZU65 1347 aa13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 CDHR2Q9BYE9 1310 aa13.05□□□□□ -0.32
PDCL3P3-201ENST00000417487 HSP90B1P14625 803 aaKnown RBP13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 FOXO4P98177 505 aa13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 SLC15A2Q16348 729 aa13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 EPHA10Q5JZY3 1008 aa13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 TBC1D9BQ66K14 1250 aa13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 DEFB132Q7Z7B7 95 aa13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 SETDB2Q96T68 719 aa13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 BICC1Q9H694 974 aaKnown RBP13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 STK32BQ9NY57 414 aa13.04□□□□□ -0.32
PDCL3P3-201ENST00000417487 PNMA6EA0A0J9YXQ4 647 aa13.03□□□□□ -0.32
PDCL3P3-201ENST00000417487 GYS1P13807 737 aa13.03□□□□□ -0.32
PDCL3P3-201ENST00000417487 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
PDCL3P3-201ENST00000417487 FAM89AQ96GI7 184 aa13.03□□□□□ -0.32
PDCL3P3-201ENST00000417487 NUP188Q5SRE5 1749 aa13.02□□□□□ -0.32
PDCL3P3-201ENST00000417487 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.32
PDCL3P3-201ENST00000417487 N4BP2Q86UW6 1770 aaPredicted RBP13.02□□□□□ -0.32
PDCL3P3-201ENST00000417487 ARFGEF2Q9Y6D5 1785 aa13.02□□□□□ -0.32
PDCL3P3-201ENST00000417487 IRS4O14654 1257 aaPredicted RBP13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 SRGAP3O43295 1099 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 NTSR2O95665 410 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 CSF1RP07333 972 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 TM4SF1P30408 202 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 SLC10A5Q5PT55 438 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 NLGN1Q8N2Q7 840 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 NOP58Q9Y2X3 529 aaKnown RBP13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 SH3TC1Q8TE82 1336 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 RGPD3A6NKT7 1758 aaPredicted RBP13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 RGPD4Q7Z3J3 1758 aa13.02□□□□□ -0.33
PDCL3P3-201ENST00000417487 PDE8AO60658 829 aa13.01□□□□□ -0.33
PDCL3P3-201ENST00000417487 LMBR1LQ6UX01 489 aa13.01□□□□□ -0.33
PDCL3P3-201ENST00000417487 TPTE2Q6XPS3 522 aa13.01□□□□□ -0.33
PDCL3P3-201ENST00000417487 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
PDCL3P3-201ENST00000417487 UPF1Q92900 1129 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDCL3P3-201ENST00000417487 TAF1LQ8IZX4 1826 aa13.01□□□□□ -0.33
PDCL3P3-201ENST00000417487 PNPLA7Q6ZV29 1317 aa13□□□□□ -0.33
PDCL3P3-201ENST00000417487 RAB11FIP3O75154 756 aa13□□□□□ -0.33
PDCL3P3-201ENST00000417487 NUCB1Q02818 461 aa13□□□□□ -0.33
PDCL3P3-201ENST00000417487 NFIXQ14938 502 aa13□□□□□ -0.33
PDCL3P3-201ENST00000417487 HSP90AB4PQ58FF6 505 aa13□□□□□ -0.33
PDCL3P3-201ENST00000417487 RTL5Q5HYW3 569 aaPredicted RBP13□□□□□ -0.33
PDCL3P3-201ENST00000417487 BICDL1Q6ZP65 573 aa13□□□□□ -0.33
PDCL3P3-201ENST00000417487 EP400Q96L91 3159 aa12.99□□□□□ -0.33
PDCL3P3-201ENST00000417487 RFX5P48382 616 aaPredicted RBP12.99□□□□□ -0.33
PDCL3P3-201ENST00000417487 TTLL11Q8NHH1 800 aa12.99□□□□□ -0.33
PDCL3P3-201ENST00000417487 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
PDCL3P3-201ENST00000417487 COPRSQ9NQ92 184 aa12.99□□□□□ -0.33
PDCL3P3-201ENST00000417487 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
PDCL3P3-201ENST00000417487 FAM177BA6PVY3 158 aa12.98□□□□□ -0.33
PDCL3P3-201ENST00000417487 MSH5O43196 834 aa12.98□□□□□ -0.33
PDCL3P3-201ENST00000417487 SURF6O75683 361 aaKnown RBP12.98□□□□□ -0.33
PDCL3P3-201ENST00000417487 CTSWP56202 376 aa12.98□□□□□ -0.33
PDCL3P3-201ENST00000417487 ANKRD45Q5TZF3 282 aa12.98□□□□□ -0.33
PDCL3P3-201ENST00000417487 NBPF5PQ86XG9 351 aaPredicted RBP12.98□□□□□ -0.33
PDCL3P3-201ENST00000417487 HCLS1P14317 486 aaPredicted RBP12.97□□□□□ -0.33
PDCL3P3-201ENST00000417487 GTF2E1P29083 439 aaPredicted RBP12.97□□□□□ -0.33
PDCL3P3-201ENST00000417487 PTPN12Q05209 780 aaKnown RBP12.97□□□□□ -0.33
PDCL3P3-201ENST00000417487 SF3B3Q15393 1217 aaKnown RBP12.97□□□□□ -0.33
PDCL3P3-201ENST00000417487 ERFEQ4G0M1 354 aa12.97□□□□□ -0.33
PDCL3P3-201ENST00000417487 CHD1LQ86WJ1 897 aa12.97□□□□□ -0.33
PDCL3P3-201ENST00000417487 CARMIL3Q8ND23 1372 aa12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 SERPINB2P05120 415 aa12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 G3BP1Q13283 466 aaKnown RBP eCLIP12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 CCDC57Q2TAC2 916 aa12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 NUTM1Q86Y26 1132 aa12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 ERC1Q8IUD2 1116 aa12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 SLC16A10Q8TF71 515 aa12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 FBXO3Q9UK99 471 aa12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 EXOC6BQ9Y2D4 811 aa12.96□□□□□ -0.33
PDCL3P3-201ENST00000417487 NUP98P52948 1817 aa12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 POLRMTO00411 1230 aaKnown RBP12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 IFIT5Q13325 482 aaKnown RBP12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 CCDC152Q4G0S7 254 aa12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 KIF1BPQ96EK5 621 aa12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 LRRCC1Q9C099 1032 aa12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 ZBTB47Q9UFB7 747 aaPredicted RBP12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 PA2G4Q9UQ80 394 aaKnown RBP12.95□□□□□ -0.34
PDCL3P3-201ENST00000417487 CHMP3Q9Y3E7 222 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms