RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TPTE2Q6XPS3 522 aa23.92■■□□□ 1.42
VCP-202ENST00000417448 JDP2Q8WYK2 163 aa23.92■■□□□ 1.42
VCP-202ENST00000417448 ZNF652Q9Y2D9 606 aa23.92■■□□□ 1.42
VCP-202ENST00000417448 TLL2Q9Y6L7 1015 aa23.92■■□□□ 1.42
VCP-202ENST00000417448 BTBD11A6QL63 1104 aa23.91■■□□□ 1.42
VCP-202ENST00000417448 ALDH1B1P30837 517 aa23.91■■□□□ 1.42
VCP-202ENST00000417448 SLC51AQ86UW1 340 aa23.91■■□□□ 1.42
VCP-202ENST00000417448 GAS2L2Q8NHY3 880 aa23.91■■□□□ 1.42
VCP-202ENST00000417448 MCOLN1Q9GZU1 580 aa23.91■■□□□ 1.42
VCP-202ENST00000417448 ABCC12Q96J65 1359 aa23.9■■□□□ 1.42
VCP-202ENST00000417448 NBPF26B4DH59 902 aa23.89■■□□□ 1.41
VCP-202ENST00000417448 LMOD1P29536 600 aaPredicted RBP23.89■■□□□ 1.41
VCP-202ENST00000417448 EIF6P56537 245 aaKnown RBP23.89■■□□□ 1.41
VCP-202ENST00000417448 NBPF10Q6P3W6 841 aaKnown RBP23.89■■□□□ 1.41
VCP-202ENST00000417448 NBPF15Q8N660 670 aa23.89■■□□□ 1.41
VCP-202ENST00000417448 HLFQ16534 295 aa23.88■■□□□ 1.41
VCP-202ENST00000417448 CRY2Q49AN0 593 aa23.88■■□□□ 1.41
VCP-202ENST00000417448 U2SURPO15042 1029 aaKnown RBP23.87■■□□□ 1.41
VCP-202ENST00000417448 MAP2K2P36507 400 aa23.87■■□□□ 1.41
VCP-202ENST00000417448 CFAP44Q96MT7 982 aa23.87■■□□□ 1.41
VCP-202ENST00000417448 USP50Q70EL3 339 aaPredicted RBP23.86■■□□□ 1.41
VCP-202ENST00000417448 NUP98P52948 1817 aa23.86■■□□□ 1.41
VCP-202ENST00000417448 RGL2O15211 777 aa23.85■■□□□ 1.41
VCP-202ENST00000417448 SAPCD2Q86UD0 394 aa23.85■■□□□ 1.41
VCP-202ENST00000417448 PHACTR3Q96KR7 559 aa23.85■■□□□ 1.41
VCP-202ENST00000417448 LAMB4A4D0S4 1761 aa23.84■■□□□ 1.41
VCP-202ENST00000417448 RALBP1Q15311 655 aa23.84■■□□□ 1.41
VCP-202ENST00000417448 CFAP53Q96M91 514 aa23.84■■□□□ 1.41
VCP-202ENST00000417448 SNRPA1P09661 255 aaKnown RBP23.83■■□□□ 1.41
VCP-202ENST00000417448 NUTM1Q86Y26 1132 aa23.83■■□□□ 1.41
VCP-202ENST00000417448 LARGE2Q8N3Y3 721 aa23.83■■□□□ 1.41
VCP-202ENST00000417448 CC2D2BQ6DHV5 1058 aa23.82■■□□□ 1.4
VCP-202ENST00000417448 CA12O43570 354 aa23.81■■□□□ 1.4
VCP-202ENST00000417448 GTF2E1P29083 439 aaPredicted RBP23.81■■□□□ 1.4
VCP-202ENST00000417448 PRKRIP1Q9H875 184 aaPredicted RBP23.81■■□□□ 1.4
VCP-202ENST00000417448 RIC1Q4ADV7 1423 aa23.81■■□□□ 1.4
VCP-202ENST00000417448 CELF2O95319 508 aaKnown RBP23.8■■□□□ 1.4
VCP-202ENST00000417448 BRPF1P55201 1214 aaPredicted RBP23.8■■□□□ 1.4
VCP-202ENST00000417448 DGKZQ13574 1117 aa23.8■■□□□ 1.4
VCP-202ENST00000417448 GPRC5DQ9NZD1 345 aa23.8■■□□□ 1.4
VCP-202ENST00000417448 HOXA10P31260 410 aaPredicted RBP23.79■■□□□ 1.4
VCP-202ENST00000417448 GLIS2Q9BZE0 524 aaPredicted RBP23.79■■□□□ 1.4
VCP-202ENST00000417448 ADARB2Q9NS39 739 aaKnown RBP23.79■■□□□ 1.4
VCP-202ENST00000417448 CIAPIN1Q6FI81 312 aa23.78■■□□□ 1.4
VCP-202ENST00000417448 MYBBP1AQ9BQG0 1328 aaKnown RBP23.78■■□□□ 1.4
VCP-202ENST00000417448 PRKAR2BP31323 418 aa23.77■■□□□ 1.4
VCP-202ENST00000417448 MCM10Q7L590 875 aa23.77■■□□□ 1.4
VCP-202ENST00000417448 NIM1KQ8IY84 436 aa23.77■■□□□ 1.4
VCP-202ENST00000417448 RPGRQ92834 1020 aaKnown RBP23.77■■□□□ 1.4
VCP-202ENST00000417448 HHIPL1Q96JK4 782 aa23.77■■□□□ 1.4
VCP-202ENST00000417448 ZIC5Q96T25 663 aa23.77■■□□□ 1.4
VCP-202ENST00000417448 TCERG1O14776 1098 aaKnown RBP23.76■■□□□ 1.39
VCP-202ENST00000417448 RSPH6AQ9H0K4 717 aa23.76■■□□□ 1.39
VCP-202ENST00000417448 PPEF1O14829 653 aaPredicted RBP23.75■■□□□ 1.39
VCP-202ENST00000417448 U2AF1L5P0DN76 240 aaPredicted RBP23.75■■□□□ 1.39
VCP-202ENST00000417448 U2AF1Q01081 240 aaKnown RBP eCLIP23.75■■□□□ 1.39
VCP-202ENST00000417448 AOC3Q16853 763 aa23.75■■□□□ 1.39
VCP-202ENST00000417448 NYXQ9GZU5 481 aa23.75■■□□□ 1.39
VCP-202ENST00000417448 UBN2Q6ZU65 1347 aa23.75■■□□□ 1.39
VCP-202ENST00000417448 PPIP5K2O43314 1243 aa23.74■■□□□ 1.39
VCP-202ENST00000417448 GRIPAP1Q4V328 841 aa23.74■■□□□ 1.39
VCP-202ENST00000417448 C3orf67Q6ZVT6 689 aa23.74■■□□□ 1.39
VCP-202ENST00000417448 PGAP2Q9UHJ9 254 aa23.74■■□□□ 1.39
VCP-202ENST00000417448 CXCL9Q07325 125 aa23.73■■□□□ 1.39
VCP-202ENST00000417448 ZNF408Q9H9D4 720 aa23.73■■□□□ 1.39
VCP-202ENST00000417448 NUDCQ9Y266 331 aa23.73■■□□□ 1.39
VCP-202ENST00000417448 GMPSP49915 693 aaPredicted RBP23.72■■□□□ 1.39
VCP-202ENST00000417448 HIRAP54198 1017 aaPredicted RBP23.72■■□□□ 1.39
VCP-202ENST00000417448 DCTN1Q14203 1278 aa23.72■■□□□ 1.39
VCP-202ENST00000417448 CRAMP1Q96RY5 1269 aa23.72■■□□□ 1.39
VCP-202ENST00000417448 IBTKQ9P2D0 1353 aaPredicted RBP23.72■■□□□ 1.39
VCP-202ENST00000417448 GPTP24298 496 aa23.71■■□□□ 1.39
VCP-202ENST00000417448 CCDC184Q52MB2 194 aa23.71■■□□□ 1.39
VCP-202ENST00000417448 NGEFQ8N5V2 710 aa23.71■■□□□ 1.39
VCP-202ENST00000417448 KDM3BQ7LBC6 1761 aa23.7■■□□□ 1.39
VCP-202ENST00000417448 MAP3K15Q6ZN16 1313 aa23.7■■□□□ 1.38
VCP-202ENST00000417448 ERVV-1B6SEH8 477 aa23.7■■□□□ 1.38
VCP-202ENST00000417448 SUSD4Q5VX71 490 aa23.7■■□□□ 1.38
VCP-202ENST00000417448 TTLL7Q6ZT98 887 aa23.7■■□□□ 1.38
VCP-202ENST00000417448 RBM17Q96I25 401 aaKnown RBP23.7■■□□□ 1.38
VCP-202ENST00000417448 SOX10P56693 466 aa23.69■■□□□ 1.38
VCP-202ENST00000417448 DLK2Q6UY11 383 aa23.69■■□□□ 1.38
VCP-202ENST00000417448 TRPM4Q8TD43 1214 aa23.69■■□□□ 1.38
VCP-202ENST00000417448 ZNRF3Q9ULT6 936 aa23.69■■□□□ 1.38
VCP-202ENST00000417448 LAMB2P55268 1798 aa23.69■■□□□ 1.38
VCP-202ENST00000417448 NOGQ13253 232 aa23.68■■□□□ 1.38
VCP-202ENST00000417448 MIS18AQ9NYP9 233 aa23.68■■□□□ 1.38
VCP-202ENST00000417448 SHTN1A0MZ66 631 aa23.67■■□□□ 1.38
VCP-202ENST00000417448 ANP32CO43423 234 aa23.67■■□□□ 1.38
VCP-202ENST00000417448 NTSR2O95665 410 aa23.67■■□□□ 1.38
VCP-202ENST00000417448 RTF1Q92541 710 aaKnown RBP23.67■■□□□ 1.38
VCP-202ENST00000417448 ATP6V0A2Q9Y487 856 aa23.67■■□□□ 1.38
VCP-202ENST00000417448 POLR2AP24928 1970 aaKnown RBP23.67■■□□□ 1.38
VCP-202ENST00000417448 ZC3H15Q8WU90 426 aaKnown RBP23.66■■□□□ 1.38
VCP-202ENST00000417448 CDHR2Q9BYE9 1310 aa23.65■■□□□ 1.38
VCP-202ENST00000417448 CDC37L1Q7L3B6 337 aa23.65■■□□□ 1.38
VCP-202ENST00000417448 ZNF34Q8IZ26 560 aa23.65■■□□□ 1.38
VCP-202ENST00000417448 RTFDC1Q9BY42 306 aaPredicted RBP23.65■■□□□ 1.38
VCP-202ENST00000417448 VPS33BQ9H267 617 aa23.65■■□□□ 1.38
VCP-202ENST00000417448 ZBTB3Q9H5J0 574 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms