RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 HDAC5Q9UQL6 1122 aa21.06■□□□□ 0.96
CALD1-204ENST00000417172 IL1RAPL2Q9NP60 686 aa21.05■□□□□ 0.96
CALD1-204ENST00000417172 UBN2Q6ZU65 1347 aa21.05■□□□□ 0.96
CALD1-204ENST00000417172 CNTNAP4Q9C0A0 1308 aa21.05■□□□□ 0.96
CALD1-204ENST00000417172 FOXO4P98177 505 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 NLRP10Q86W26 655 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 FAM89AQ96GI7 184 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 ERVV-1B6SEH8 477 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 CAMTA2O94983 1202 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 RXRBP28702 533 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 POTEAQ6S8J7 498 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 LRRC4BQ9NT99 713 aa21.04■□□□□ 0.96
CALD1-204ENST00000417172 TRIM28Q13263 835 aaKnown RBP21.03■□□□□ 0.96
CALD1-204ENST00000417172 RABL6Q3YEC7 729 aaPredicted RBP21.02■□□□□ 0.96
CALD1-204ENST00000417172 LMBR1LQ6UX01 489 aa21.02■□□□□ 0.96
CALD1-204ENST00000417172 SIL1Q9H173 461 aa21.02■□□□□ 0.96
CALD1-204ENST00000417172 TSHZ3Q63HK5 1081 aa21.02■□□□□ 0.95
CALD1-204ENST00000417172 GNPATO15228 680 aa21.01■□□□□ 0.95
CALD1-204ENST00000417172 HSP90AB3PQ58FF7 597 aa21.01■□□□□ 0.95
CALD1-204ENST00000417172 RHPN1Q8TCX5 695 aa21.01■□□□□ 0.95
CALD1-204ENST00000417172 NOP58Q9Y2X3 529 aaKnown RBP21.01■□□□□ 0.95
CALD1-204ENST00000417172 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.01■□□□□ 0.95
CALD1-204ENST00000417172 SCN7AQ01118 1682 aa21.01■□□□□ 0.95
CALD1-204ENST00000417172 MYH3P11055 1940 aa21■□□□□ 0.95
CALD1-204ENST00000417172 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
CALD1-204ENST00000417172 ZNF34Q8IZ26 560 aa21■□□□□ 0.95
CALD1-204ENST00000417172 CHMP3Q9Y3E7 222 aa21■□□□□ 0.95
CALD1-204ENST00000417172 C4AP0C0L4 1744 aa21■□□□□ 0.95
CALD1-204ENST00000417172 GSPT1P15170 499 aaKnown RBP21■□□□□ 0.95
CALD1-204ENST00000417172 RFX5P48382 616 aaPredicted RBP21■□□□□ 0.95
CALD1-204ENST00000417172 FAM177BA6PVY3 158 aa20.99■□□□□ 0.95
CALD1-204ENST00000417172 RAB11FIP3O75154 756 aa20.99■□□□□ 0.95
CALD1-204ENST00000417172 SEC24BO95487 1268 aa20.99■□□□□ 0.95
CALD1-204ENST00000417172 PCCAP05165 728 aaPredicted RBP20.99■□□□□ 0.95
CALD1-204ENST00000417172 ZBTB38Q8NAP3 1195 aaPredicted RBP20.99■□□□□ 0.95
CALD1-204ENST00000417172 TUBGCP6Q96RT7 1819 aa20.98■□□□□ 0.95
CALD1-204ENST00000417172 SALL3Q9BXA9 1300 aa20.98■□□□□ 0.95
CALD1-204ENST00000417172 PTPN12Q05209 780 aaKnown RBP20.98■□□□□ 0.95
CALD1-204ENST00000417172 RC3H1Q5TC82 1133 aaKnown RBP20.98■□□□□ 0.95
CALD1-204ENST00000417172 NUTM1Q86Y26 1132 aa20.98■□□□□ 0.95
CALD1-204ENST00000417172 KIF1BPQ96EK5 621 aa20.98■□□□□ 0.95
CALD1-204ENST00000417172 CCDC85AQ96PX6 553 aaPredicted RBP20.98■□□□□ 0.95
CALD1-204ENST00000417172 RPS6KA4O75676 772 aa20.97■□□□□ 0.95
CALD1-204ENST00000417172 SUSD4Q5VX71 490 aa20.97■□□□□ 0.95
CALD1-204ENST00000417172 SRP68Q9UHB9 627 aaKnown RBP20.97■□□□□ 0.95
CALD1-204ENST00000417172 TRMT112Q9UI30 125 aaKnown RBP20.97■□□□□ 0.95
CALD1-204ENST00000417172 SASH1O94885 1247 aa20.96■□□□□ 0.95
CALD1-204ENST00000417172 BMP2KLQ5H9B9 411 aa20.96■□□□□ 0.95
CALD1-204ENST00000417172 UBR3Q6ZT12 1888 aa20.96■□□□□ 0.95
CALD1-204ENST00000417172 PHF14O94880 888 aa20.96■□□□□ 0.95
CALD1-204ENST00000417172 PDE1AP54750 535 aa20.96■□□□□ 0.95
CALD1-204ENST00000417172 TTC22Q5TAA0 569 aa20.96■□□□□ 0.95
CALD1-204ENST00000417172 NIP7Q9Y221 180 aaKnown RBP eCLIP20.96■□□□□ 0.95
CALD1-204ENST00000417172 DDX60Q8IY21 1712 aaKnown RBP20.95■□□□□ 0.94
CALD1-204ENST00000417172 HSP90AB4PQ58FF6 505 aa20.95■□□□□ 0.94
CALD1-204ENST00000417172 ZNF594Q96JF6 807 aaPredicted RBP20.94■□□□□ 0.94
CALD1-204ENST00000417172 BCL2L12Q9HB09 334 aa20.94■□□□□ 0.94
CALD1-204ENST00000417172 RTCBQ9Y3I0 505 aaKnown RBP20.94■□□□□ 0.94
CALD1-204ENST00000417172 MX1P20591 662 aa20.94■□□□□ 0.94
CALD1-204ENST00000417172 G3BP1Q13283 466 aaKnown RBP eCLIP20.94■□□□□ 0.948e-9■□□□□ 9.6
CALD1-204ENST00000417172 USPL1Q5W0Q7 1092 aa20.94■□□□□ 0.94
CALD1-204ENST00000417172 COPRSQ9NQ92 184 aa20.94■□□□□ 0.94
CALD1-204ENST00000417172 TNS1Q9HBL0 1735 aaKnown RBP20.93■□□□□ 0.94
CALD1-204ENST00000417172 CDHR2Q9BYE9 1310 aa20.93■□□□□ 0.94
CALD1-204ENST00000417172 IRS4O14654 1257 aaPredicted RBP20.93■□□□□ 0.94
CALD1-204ENST00000417172 PROM2Q8N271 834 aa20.93■□□□□ 0.94
CALD1-204ENST00000417172 CASZ1Q86V15 1759 aa20.93■□□□□ 0.94
CALD1-204ENST00000417172 BICDL1Q6ZP65 573 aa20.92■□□□□ 0.94
CALD1-204ENST00000417172 ARHGEF1Q92888 912 aaKnown RBP20.92■□□□□ 0.94
CALD1-204ENST00000417172 AK7Q96M32 723 aa20.92■□□□□ 0.94
CALD1-204ENST00000417172 PLA2G12BQ9BX93 195 aa20.92■□□□□ 0.94
CALD1-204ENST00000417172 HCLS1P14317 486 aaPredicted RBP20.91■□□□□ 0.94
CALD1-204ENST00000417172 TBC1D9BQ66K14 1250 aa20.91■□□□□ 0.94
CALD1-204ENST00000417172 ERC1Q8IUD2 1116 aa20.91■□□□□ 0.94
CALD1-204ENST00000417172 OSBPL3Q9H4L5 887 aa20.91■□□□□ 0.94
CALD1-204ENST00000417172 NARFQ9UHQ1 456 aa20.91■□□□□ 0.94
CALD1-204ENST00000417172 ZNF652Q9Y2D9 606 aa20.91■□□□□ 0.94
CALD1-204ENST00000417172 LAMB2P55268 1798 aa20.91■□□□□ 0.94
CALD1-204ENST00000417172 NTSR2O95665 410 aa20.9■□□□□ 0.94
CALD1-204ENST00000417172 APBA3O96018 575 aa20.9■□□□□ 0.94
CALD1-204ENST00000417172 TXNRD1Q16881 649 aa20.9■□□□□ 0.94
CALD1-204ENST00000417172 UTP14AQ9BVJ6 771 aaKnown RBP20.9■□□□□ 0.94
CALD1-204ENST00000417172 CSF1RP07333 972 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 SDSP20132 328 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 CTSWP56202 376 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 LRRC24Q50LG9 513 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 SLC27A3Q5K4L6 730 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 CLEC4GQ6UXB4 293 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 CLASRPQ8N2M8 674 aaKnown RBP20.89■□□□□ 0.93
CALD1-204ENST00000417172 TTLL11Q8NHH1 800 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 EAF2Q96CJ1 260 aaPredicted RBP20.89■□□□□ 0.93
CALD1-204ENST00000417172 PUS3Q9BZE2 481 aaKnown RBP20.89■□□□□ 0.93
CALD1-204ENST00000417172 GREM2Q9H772 168 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 TLR7Q9NYK1 1049 aaKnown RBP20.89■□□□□ 0.93
CALD1-204ENST00000417172 AK9Q5TCS8 1911 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 SH3TC1Q8TE82 1336 aa20.89■□□□□ 0.93
CALD1-204ENST00000417172 TFCP2Q12800 502 aa20.88■□□□□ 0.93
CALD1-204ENST00000417172 PARP10Q53GL7 1025 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms