RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 UTP14AQ9BVJ6 771 aaKnown RBP23.27■■□□□ 1.32
CPNE1-210ENST00000416778 C3orf67Q6ZVT6 689 aa23.26■■□□□ 1.31
CPNE1-210ENST00000416778 RTKN2Q8IZC4 609 aa23.26■■□□□ 1.31
CPNE1-210ENST00000416778 IFT57Q9NWB7 429 aa23.26■■□□□ 1.31
CPNE1-210ENST00000416778 GNAI1P63096 354 aa23.25■■□□□ 1.31
CPNE1-210ENST00000416778 FKBP4Q02790 459 aaKnown RBP eCLIP23.25■■□□□ 1.31
CPNE1-210ENST00000416778 HSP90AB3PQ58FF7 597 aa23.25■■□□□ 1.31
CPNE1-210ENST00000416778 NLRP10Q86W26 655 aa23.25■■□□□ 1.31
CPNE1-210ENST00000416778 CRAMP1Q96RY5 1269 aa23.25■■□□□ 1.31
CPNE1-210ENST00000416778 DBF4Q9UBU7 674 aaPredicted RBP23.25■■□□□ 1.31
CPNE1-210ENST00000416778 FER1L6Q2WGJ9 1857 aa23.25■■□□□ 1.31
CPNE1-210ENST00000416778 CALD1Q05682 793 aaKnown RBP23.24■■□□□ 1.31
CPNE1-210ENST00000416778 FSTL1Q12841 308 aa23.24■■□□□ 1.31
CPNE1-210ENST00000416778 ANKRD13DQ6ZTN6 518 aa23.24■■□□□ 1.31
CPNE1-210ENST00000416778 NLRP3Q96P20 1036 aa23.24■■□□□ 1.31
CPNE1-210ENST00000416778 SYNE4Q8N205 404 aa23.23■■□□□ 1.31
CPNE1-210ENST00000416778 PLBD2Q8NHP8 589 aa23.23■■□□□ 1.31
CPNE1-210ENST00000416778 RPGRQ92834 1020 aaKnown RBP23.23■■□□□ 1.31
CPNE1-210ENST00000416778 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
CPNE1-210ENST00000416778 RIC1Q4ADV7 1423 aa23.23■■□□□ 1.31
CPNE1-210ENST00000416778 CCDC88AQ3V6T2 1871 aa23.22■■□□□ 1.31
CPNE1-210ENST00000416778 APLP1P51693 650 aa23.22■■□□□ 1.31
CPNE1-210ENST00000416778 ZNF277Q9NRM2 450 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-210ENST00000416778 HYPKQ9NX55 129 aa23.22■■□□□ 1.31
CPNE1-210ENST00000416778 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-210ENST00000416778 DDNO94850 711 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-210ENST00000416778 CC2D2BQ6DHV5 1058 aa23.21■■□□□ 1.31
CPNE1-210ENST00000416778 C8orf58Q8NAV2 365 aa23.21■■□□□ 1.31
CPNE1-210ENST00000416778 DNAJC5GQ8N7S2 189 aa23.2■■□□□ 1.3
CPNE1-210ENST00000416778 RNF123Q5XPI4 1314 aa23.19■■□□□ 1.3
CPNE1-210ENST00000416778 PSMD1Q99460 953 aa23.19■■□□□ 1.3
CPNE1-210ENST00000416778 ISCA1Q9BUE6 129 aa23.19■■□□□ 1.3
CPNE1-210ENST00000416778 TRMT112Q9UI30 125 aaKnown RBP23.19■■□□□ 1.3
CPNE1-210ENST00000416778 ANP32CO43423 234 aa23.18■■□□□ 1.3
CPNE1-210ENST00000416778 HCLS1P14317 486 aaPredicted RBP23.18■■□□□ 1.3
CPNE1-210ENST00000416778 CCDC27Q2M243 656 aa23.18■■□□□ 1.3
CPNE1-210ENST00000416778 SMC1BQ8NDV3 1235 aa23.18■■□□□ 1.3
CPNE1-210ENST00000416778 ARFGEF2Q9Y6D5 1785 aa23.17■■□□□ 1.3
CPNE1-210ENST00000416778 TNRC6CQ9HCJ0 1690 aaKnown RBP23.17■■□□□ 1.3
CPNE1-210ENST00000416778 IARSP41252 1262 aaKnown RBP23.17■■□□□ 1.3
CPNE1-210ENST00000416778 GRIPAP1Q4V328 841 aa23.17■■□□□ 1.3
CPNE1-210ENST00000416778 SNED1Q8TER0 1413 aa23.16■■□□□ 1.3
CPNE1-210ENST00000416778 TRIM28Q13263 835 aaKnown RBP23.16■■□□□ 1.3
CPNE1-210ENST00000416778 NCBP3Q53F19 620 aaKnown RBP23.16■■□□□ 1.3
CPNE1-210ENST00000416778 SLC51AQ86UW1 340 aa23.16■■□□□ 1.3
CPNE1-210ENST00000416778 WWC1Q8IX03 1113 aa23.16■■□□□ 1.3
CPNE1-210ENST00000416778 PHAXQ9H814 394 aaKnown RBP23.16■■□□□ 1.3
CPNE1-210ENST00000416778 SH3TC1Q8TE82 1336 aa23.15■■□□□ 1.3
CPNE1-210ENST00000416778 ATP5J2-PTCD1G3V325 749 aa23.15■■□□□ 1.3
CPNE1-210ENST00000416778 FZD9O00144 591 aa23.15■■□□□ 1.3
CPNE1-210ENST00000416778 TCERG1O14776 1098 aaKnown RBP23.15■■□□□ 1.3
CPNE1-210ENST00000416778 ZNF428Q96B54 188 aa23.15■■□□□ 1.3
CPNE1-210ENST00000416778 MRS2Q9HD23 443 aa23.15■■□□□ 1.3
CPNE1-210ENST00000416778 DICER1Q9UPY3 1922 aaKnown RBP23.14■■□□□ 1.3
CPNE1-210ENST00000416778 PPEF1O14829 653 aaPredicted RBP23.14■■□□□ 1.29
CPNE1-210ENST00000416778 BBOX1O75936 387 aa23.14■■□□□ 1.29
CPNE1-210ENST00000416778 TSPYL6Q8N831 410 aa23.14■■□□□ 1.29
CPNE1-210ENST00000416778 ATP6V0A2Q9Y487 856 aa23.14■■□□□ 1.29
CPNE1-210ENST00000416778 CACNA1SQ13698 1873 aa23.13■■□□□ 1.29
CPNE1-210ENST00000416778 L3MBTL3Q96JM7 780 aaPredicted RBP23.13■■□□□ 1.29
CPNE1-210ENST00000416778 FAM89AQ96GI7 184 aa23.12■■□□□ 1.29
CPNE1-210ENST00000416778 ABCC4O15439 1325 aa23.11■■□□□ 1.29
CPNE1-210ENST00000416778 WDR90Q96KV7 1748 aa23.11■■□□□ 1.29
CPNE1-210ENST00000416778 HTRA3P83110 453 aa23.11■■□□□ 1.29
CPNE1-210ENST00000416778 CCDC30Q5VVM6 783 aa23.11■■□□□ 1.29
CPNE1-210ENST00000416778 RIC3Q7Z5B4 369 aa23.11■■□□□ 1.29
CPNE1-210ENST00000416778 SP8Q8IXZ3 490 aa23.11■■□□□ 1.29
CPNE1-210ENST00000416778 TSR2Q969E8 191 aaKnown RBP23.11■■□□□ 1.29
CPNE1-210ENST00000416778 CHMP4AQ9BY43 222 aa23.11■■□□□ 1.29
CPNE1-210ENST00000416778 TIAM2Q8IVF5 1701 aa23.11■■□□□ 1.29
CPNE1-210ENST00000416778 ZNF541Q9H0D2 1346 aa23.1■■□□□ 1.29
CPNE1-210ENST00000416778 DDX46Q7L014 1031 aaKnown RBP23.1■■□□□ 1.29
CPNE1-210ENST00000416778 JDP2Q8WYK2 163 aa23.1■■□□□ 1.29
CPNE1-210ENST00000416778 SF3B3Q15393 1217 aaKnown RBP23.09■■□□□ 1.29
CPNE1-210ENST00000416778 POTEIP0CG38 1075 aa23.08■■□□□ 1.29
CPNE1-210ENST00000416778 POTEJP0CG39 1038 aa23.08■■□□□ 1.29
CPNE1-210ENST00000416778 GOLGA2Q08379 1002 aa23.08■■□□□ 1.29
CPNE1-210ENST00000416778 TMX4Q9H1E5 349 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-210ENST00000416778 VPS33BQ9H267 617 aa23.08■■□□□ 1.29
CPNE1-210ENST00000416778 TAF1DQ9H5J8 278 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-210ENST00000416778 IL16Q14005 1332 aa23.08■■□□□ 1.28
CPNE1-210ENST00000416778 IQCA1LA6NCM1 817 aa23.07■■□□□ 1.28
CPNE1-210ENST00000416778 GRAPQ13588 217 aa23.07■■□□□ 1.28
CPNE1-210ENST00000416778 GRAPLQ8TC17 118 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-210ENST00000416778 RTFDC1Q9BY42 306 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-210ENST00000416778 RTL5Q5HYW3 569 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-210ENST00000416778 CHADLQ6NUI6 762 aa23.06■■□□□ 1.28
CPNE1-210ENST00000416778 GPC2Q8N158 579 aa23.06■■□□□ 1.28
CPNE1-210ENST00000416778 LARGE2Q8N3Y3 721 aa23.06■■□□□ 1.28
CPNE1-210ENST00000416778 IRS4O14654 1257 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-210ENST00000416778 ZBTB38Q8NAP3 1195 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-210ENST00000416778 MYD88Q99836 296 aa23.05■■□□□ 1.28
CPNE1-210ENST00000416778 METTL22Q9BUU2 404 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-210ENST00000416778 EIF6P56537 245 aaKnown RBP23.04■■□□□ 1.28
CPNE1-210ENST00000416778 WDR63Q8IWG1 891 aa23.04■■□□□ 1.28
CPNE1-210ENST00000416778 MPNDQ8N594 471 aa23.04■■□□□ 1.28
CPNE1-210ENST00000416778 CCDC191Q8NCU4 936 aa23.04■■□□□ 1.28
CPNE1-210ENST00000416778 HACL1Q9UJ83 578 aa23.04■■□□□ 1.28
CPNE1-210ENST00000416778 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
CPNE1-210ENST00000416778 DDX58O95786 925 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms