RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 PA2G4Q9UQ80 394 aaKnown RBP12.32□□□□□ -0.44
COL12A1-203ENST00000416123 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 PLCH2O75038 1416 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
COL12A1-203ENST00000416123 TSPY3P0CV98 308 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 TSPY8P0CW00 308 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
COL12A1-203ENST00000416123 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
COL12A1-203ENST00000416123 DESP17661 470 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 CCDC112Q8NEF3 446 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 PRKCSHP14314 528 aaPredicted RBP12.31□□□□□ -0.44
COL12A1-203ENST00000416123 NECAB1Q8N987 351 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 FSIP1Q8NA03 581 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 NEK1Q96PY6 1258 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 TSPYL1Q9H0U9 437 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 TXLNBQ8N3L3 684 aa12.31□□□□□ -0.44
COL12A1-203ENST00000416123 C16orf71Q8IYS4 520 aaPredicted RBP12.3□□□□□ -0.44
COL12A1-203ENST00000416123 CABP5Q9NP86 173 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 SLC4A4Q9Y6R1 1079 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 CCDC183Q5T5S1 534 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 NPATQ14207 1427 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 TRAPPC8Q9Y2L5 1435 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 CRNKL1Q9BZJ0 848 aaKnown RBP12.3□□□□□ -0.44
COL12A1-203ENST00000416123 CLEC11AQ9Y240 323 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 TRIM21P19474 475 aaKnown RBP12.3□□□□□ -0.44
COL12A1-203ENST00000416123 HELBQ8NG08 1087 aaPredicted RBP12.3□□□□□ -0.44
COL12A1-203ENST00000416123 TCEANC2Q96MN5 208 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 GRM8O00222 908 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 PEG3Q9GZU2 1588 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
COL12A1-203ENST00000416123 RAB34Q9BZG1 259 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 BAG4O95429 457 aaKnown RBP12.3□□□□□ -0.44
COL12A1-203ENST00000416123 ARHGAP29Q52LW3 1261 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 TTC22Q5TAA0 569 aa12.3□□□□□ -0.44
COL12A1-203ENST00000416123 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 IFIT1BQ5T764 474 aaKnown RBP12.29□□□□□ -0.44
COL12A1-203ENST00000416123 NCOA7Q8NI08 942 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
COL12A1-203ENST00000416123 EHMT1Q9H9B1 1298 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 IARSP41252 1262 aaKnown RBP12.29□□□□□ -0.44
COL12A1-203ENST00000416123 CHST3Q7LGC8 479 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 UQCRHLA0A096LP55 91 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 UQCRHP07919 91 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 MTHFSDQ2M296 383 aaKnown RBP12.29□□□□□ -0.44
COL12A1-203ENST00000416123 KRT24Q2M2I5 525 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 POTEJP0CG39 1038 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 KIF5BP33176 963 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 CIZ1Q9ULV3 898 aaPredicted RBP12.29□□□□□ -0.44
COL12A1-203ENST00000416123 NUP153P49790 1475 aaKnown RBP12.29□□□□□ -0.44
COL12A1-203ENST00000416123 PLS1Q14651 629 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 AKAP4Q5JQC9 854 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 TAF4BQ92750 862 aa12.29□□□□□ -0.44
COL12A1-203ENST00000416123 ADAMTS12P58397 1594 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 IL2RBP14784 551 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 LMBR1LQ6UX01 489 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 TBC1D2Q9BYX2 928 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 GBP2P32456 591 aaPredicted RBP12.28□□□□□ -0.44
COL12A1-203ENST00000416123 SPA17Q15506 151 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 NLRP3Q96P20 1036 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 ANO10Q9NW15 660 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 RBM27Q9P2N5 1060 aaKnown RBP12.28□□□□□ -0.44
COL12A1-203ENST00000416123 JAKMIP3Q5VZ66 844 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 SYCP3Q8IZU3 236 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 RHPN1Q8TCX5 695 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 CALML4Q96GE6 196 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 USP8P40818 1118 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 CWF19L2Q2TBE0 894 aaKnown RBP12.28□□□□□ -0.44
COL12A1-203ENST00000416123 DDX17Q92841 729 aaKnown RBP12.28□□□□□ -0.44
COL12A1-203ENST00000416123 VEZTQ9HBM0 779 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 LMTK3Q96Q04 1460 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 LEKR1Q6ZMV7 388 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 UTP14AQ9BVJ6 771 aaKnown RBP12.28□□□□□ -0.44
COL12A1-203ENST00000416123 PTPRKQ15262 1439 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 PPM1FP49593 454 aaPredicted RBP12.28□□□□□ -0.44
COL12A1-203ENST00000416123 HEATR3Q7Z4Q2 680 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 TMEM87AQ8NBN3 555 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 CCDC150Q8NCX0 1101 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 ORC3Q9UBD5 711 aaPredicted RBP12.28□□□□□ -0.44
COL12A1-203ENST00000416123 LDHCP07864 332 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 BTG4Q9NY30 223 aa12.28□□□□□ -0.44
COL12A1-203ENST00000416123 SDSP20132 328 aa12.27□□□□□ -0.44
COL12A1-203ENST00000416123 HMGN5P82970 282 aaKnown RBP12.27□□□□□ -0.44
COL12A1-203ENST00000416123 WTAPQ15007 396 aa12.27□□□□□ -0.44
COL12A1-203ENST00000416123 ATP2B3Q16720 1220 aa12.27□□□□□ -0.44
COL12A1-203ENST00000416123 CCDC178Q5BJE1 867 aa12.27□□□□□ -0.44
COL12A1-203ENST00000416123 TCERG1LQ5VWI1 586 aa12.27□□□□□ -0.44
COL12A1-203ENST00000416123 CASQ1P31415 396 aa12.27□□□□□ -0.44
COL12A1-203ENST00000416123 RALGAPBQ86X10 1494 aa12.27□□□□□ -0.44
COL12A1-203ENST00000416123 IDEP14735 1019 aa12.27□□□□□ -0.45
COL12A1-203ENST00000416123 TNPO1Q92973 898 aaKnown RBP12.27□□□□□ -0.45
COL12A1-203ENST00000416123 PHAXQ9H814 394 aaKnown RBP12.27□□□□□ -0.45
COL12A1-203ENST00000416123 CA8P35219 290 aa12.27□□□□□ -0.45
COL12A1-203ENST00000416123 CTNNBL1Q8WYA6 563 aaPredicted RBP12.27□□□□□ -0.45
COL12A1-203ENST00000416123 TOP1P11387 765 aaKnown RBP12.27□□□□□ -0.45
COL12A1-203ENST00000416123 SCAND2PQ9GZW5 306 aaPredicted RBP12.27□□□□□ -0.45
COL12A1-203ENST00000416123 TRMT1Q9NXH9 659 aaKnown RBP12.27□□□□□ -0.45
COL12A1-203ENST00000416123 MACROD2A1Z1Q3 448 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms