RNA–Protein interactions for RNA: ENST00000416104.5

LINC00222-202, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best) BASIC

Gene LINC00222, Length 1,785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-202ENST00000416104 NLRP3Q96P20 1036 aa14.96□□□□□ -0.01
LINC00222-202ENST00000416104 CHPF2Q9P2E5 772 aa14.96□□□□□ -0.01
LINC00222-202ENST00000416104 ABCC12Q96J65 1359 aa14.96□□□□□ -0.01
LINC00222-202ENST00000416104 HOXA10P31260 410 aaPredicted RBP14.96□□□□□ -0.02
LINC00222-202ENST00000416104 FSTL1Q12841 308 aa14.96□□□□□ -0.02
LINC00222-202ENST00000416104 TCIRG1Q13488 830 aa14.96□□□□□ -0.02
LINC00222-202ENST00000416104 HYPKQ9NX55 129 aa14.96□□□□□ -0.02
LINC00222-202ENST00000416104 RNF123Q5XPI4 1314 aa14.95□□□□□ -0.02
LINC00222-202ENST00000416104 SLX4Q8IY92 1834 aa14.95□□□□□ -0.02
LINC00222-202ENST00000416104 RIC1Q4ADV7 1423 aa14.95□□□□□ -0.02
LINC00222-202ENST00000416104 APLP1P51693 650 aa14.95□□□□□ -0.02
LINC00222-202ENST00000416104 SLC10A5Q5PT55 438 aa14.95□□□□□ -0.02
LINC00222-202ENST00000416104 CC2D2BQ6DHV5 1058 aa14.95□□□□□ -0.02
LINC00222-202ENST00000416104 CHMP4AQ9BY43 222 aa14.95□□□□□ -0.02
LINC00222-202ENST00000416104 GRIPAP1Q4V328 841 aa14.94□□□□□ -0.02
LINC00222-202ENST00000416104 ANKRD13DQ6ZTN6 518 aa14.94□□□□□ -0.02
LINC00222-202ENST00000416104 PLBD2Q8NHP8 589 aa14.94□□□□□ -0.02
LINC00222-202ENST00000416104 CRAMP1Q96RY5 1269 aa14.94□□□□□ -0.02
LINC00222-202ENST00000416104 NUP98P52948 1817 aa14.94□□□□□ -0.02
LINC00222-202ENST00000416104 CCDC184Q52MB2 194 aa14.93□□□□□ -0.02
LINC00222-202ENST00000416104 NLRP10Q86W26 655 aa14.93□□□□□ -0.02
LINC00222-202ENST00000416104 TMX4Q9H1E5 349 aaPredicted RBP14.93□□□□□ -0.02
LINC00222-202ENST00000416104 SYNE4Q8N205 404 aa14.93□□□□□ -0.02
LINC00222-202ENST00000416104 SMC1BQ8NDV3 1235 aa14.93□□□□□ -0.02
LINC00222-202ENST00000416104 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
LINC00222-202ENST00000416104 ZNF277Q9NRM2 450 aaPredicted RBP14.93□□□□□ -0.02
LINC00222-202ENST00000416104 TRMT112Q9UI30 125 aaKnown RBP14.93□□□□□ -0.02
LINC00222-202ENST00000416104 ELL2O00472 640 aaPredicted RBP14.92□□□□□ -0.02
LINC00222-202ENST00000416104 OLFM4Q6UX06 510 aa14.92□□□□□ -0.02
LINC00222-202ENST00000416104 FER1L6Q2WGJ9 1857 aa14.92□□□□□ -0.02
LINC00222-202ENST00000416104 PSMD1Q99460 953 aa14.91□□□□□ -0.02
LINC00222-202ENST00000416104 SH3TC1Q8TE82 1336 aa14.91□□□□□ -0.02
LINC00222-202ENST00000416104 ARFGEF2Q9Y6D5 1785 aa14.91□□□□□ -0.02
LINC00222-202ENST00000416104 TNRC6CQ9HCJ0 1690 aaKnown RBP14.91□□□□□ -0.02
LINC00222-202ENST00000416104 PPEF1O14829 653 aaPredicted RBP14.9□□□□□ -0.02
LINC00222-202ENST00000416104 DDNO94850 711 aaPredicted RBP14.9□□□□□ -0.02
LINC00222-202ENST00000416104 IARSP41252 1262 aaKnown RBP14.9□□□□□ -0.02
LINC00222-202ENST00000416104 CCDC27Q2M243 656 aa14.9□□□□□ -0.02
LINC00222-202ENST00000416104 JDP2Q8WYK2 163 aa14.9□□□□□ -0.02
LINC00222-202ENST00000416104 TCERG1O14776 1098 aaKnown RBP14.89□□□□□ -0.03
LINC00222-202ENST00000416104 HCLS1P14317 486 aaPredicted RBP14.89□□□□□ -0.03
LINC00222-202ENST00000416104 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
LINC00222-202ENST00000416104 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
LINC00222-202ENST00000416104 CCDC30Q5VVM6 783 aa14.89□□□□□ -0.03
LINC00222-202ENST00000416104 C3orf67Q6ZVT6 689 aa14.89□□□□□ -0.03
LINC00222-202ENST00000416104 RIC3Q7Z5B4 369 aa14.89□□□□□ -0.03
LINC00222-202ENST00000416104 C8orf58Q8NAV2 365 aa14.89□□□□□ -0.03
LINC00222-202ENST00000416104 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
LINC00222-202ENST00000416104 POTECB2RU33 542 aa14.88□□□□□ -0.03
LINC00222-202ENST00000416104 BBOX1O75936 387 aa14.88□□□□□ -0.03
LINC00222-202ENST00000416104 DDX46Q7L014 1031 aaKnown RBP14.88□□□□□ -0.03
LINC00222-202ENST00000416104 WWC1Q8IX03 1113 aa14.88□□□□□ -0.03
LINC00222-202ENST00000416104 ISCA1Q9BUE6 129 aa14.88□□□□□ -0.03
LINC00222-202ENST00000416104 CACNA1SQ13698 1873 aa14.88□□□□□ -0.03
LINC00222-202ENST00000416104 CCDC88AQ3V6T2 1871 aa14.88□□□□□ -0.03
LINC00222-202ENST00000416104 IQCA1LA6NCM1 817 aa14.88□□□□□ -0.03
LINC00222-202ENST00000416104 ATP5J2-PTCD1G3V325 749 aa14.87□□□□□ -0.03
LINC00222-202ENST00000416104 TRIM28Q13263 835 aaKnown RBP14.87□□□□□ -0.03
LINC00222-202ENST00000416104 ATP6V0A2Q9Y487 856 aa14.87□□□□□ -0.03
LINC00222-202ENST00000416104 DDX58O95786 925 aaKnown RBP14.86□□□□□ -0.03
LINC00222-202ENST00000416104 FAM89AQ96GI7 184 aa14.86□□□□□ -0.03
LINC00222-202ENST00000416104 L3MBTL3Q96JM7 780 aaPredicted RBP14.86□□□□□ -0.03
LINC00222-202ENST00000416104 PHAXQ9H814 394 aaKnown RBP14.86□□□□□ -0.03
LINC00222-202ENST00000416104 ABCC4O15439 1325 aa14.86□□□□□ -0.03
LINC00222-202ENST00000416104 WDR90Q96KV7 1748 aa14.86□□□□□ -0.03
LINC00222-202ENST00000416104 FZD9O00144 591 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 HSP90B1P14625 803 aaKnown RBP14.85□□□□□ -0.03
LINC00222-202ENST00000416104 EIF6P56537 245 aaKnown RBP14.85□□□□□ -0.03
LINC00222-202ENST00000416104 SP8Q8IXZ3 490 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 LARGE2Q8N3Y3 721 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 SUPT20HQ8NEM7 779 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 VPS33BQ9H267 617 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 IL16Q14005 1332 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 DICER1Q9UPY3 1922 aaKnown RBP14.85□□□□□ -0.03
LINC00222-202ENST00000416104 GRAPQ13588 217 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 GRAPLQ8TC17 118 aaPredicted RBP14.85□□□□□ -0.03
LINC00222-202ENST00000416104 TSR2Q969E8 191 aaKnown RBP14.85□□□□□ -0.03
LINC00222-202ENST00000416104 ZNF428Q96B54 188 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
LINC00222-202ENST00000416104 TMC4Q7Z404 712 aa14.84□□□□□ -0.03
LINC00222-202ENST00000416104 GPC2Q8N158 579 aa14.84□□□□□ -0.03
LINC00222-202ENST00000416104 TSPYL6Q8N831 410 aa14.84□□□□□ -0.03
LINC00222-202ENST00000416104 ZNF541Q9H0D2 1346 aa14.84□□□□□ -0.03
LINC00222-202ENST00000416104 SNED1Q8TER0 1413 aa14.84□□□□□ -0.03
LINC00222-202ENST00000416104 SF3B3Q15393 1217 aaKnown RBP14.83□□□□□ -0.03
LINC00222-202ENST00000416104 CHADLQ6NUI6 762 aa14.83□□□□□ -0.03
LINC00222-202ENST00000416104 DPP8Q6V1X1 898 aaPredicted RBP14.83□□□□□ -0.03
LINC00222-202ENST00000416104 MPNDQ8N594 471 aa14.83□□□□□ -0.03
LINC00222-202ENST00000416104 DNAJC5GQ8N7S2 189 aa14.83□□□□□ -0.03
LINC00222-202ENST00000416104 MYD88Q99836 296 aa14.83□□□□□ -0.03
LINC00222-202ENST00000416104 HACL1Q9UJ83 578 aa14.83□□□□□ -0.03
LINC00222-202ENST00000416104 IRS4O14654 1257 aaPredicted RBP14.83□□□□□ -0.04
LINC00222-202ENST00000416104 PPIP5K2O43314 1243 aa14.83□□□□□ -0.04
LINC00222-202ENST00000416104 TWISTNBQ3B726 338 aaPredicted RBP14.83□□□□□ -0.04
LINC00222-202ENST00000416104 RTL5Q5HYW3 569 aaPredicted RBP14.83□□□□□ -0.04
LINC00222-202ENST00000416104 NIM1KQ8IY84 436 aa14.83□□□□□ -0.04
LINC00222-202ENST00000416104 ZBTB38Q8NAP3 1195 aaPredicted RBP14.83□□□□□ -0.04
LINC00222-202ENST00000416104 CCDC191Q8NCU4 936 aa14.83□□□□□ -0.04
LINC00222-202ENST00000416104 TAF1DQ9H5J8 278 aaPredicted RBP14.83□□□□□ -0.04
LINC00222-202ENST00000416104 SALL2Q9Y467 1007 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms