RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 PTCD1O75127 700 aaKnown RBP7.33□□□□□ -1.24
TRAPPC13-203ENST00000415825 EPB42P16452 691 aa7.33□□□□□ -1.24
TRAPPC13-203ENST00000415825 YBX3P16989 372 aaKnown RBP eCLIP7.33□□□□□ -1.24
TRAPPC13-203ENST00000415825 ARID4AP29374 1257 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC13-203ENST00000415825 NFATC2IPQ8NCF5 419 aa7.33□□□□□ -1.24
TRAPPC13-203ENST00000415825 HSH2DQ96JZ2 352 aa7.33□□□□□ -1.24
TRAPPC13-203ENST00000415825 PHACTR1Q9C0D0 580 aa7.33□□□□□ -1.24
TRAPPC13-203ENST00000415825 HCN4Q9Y3Q4 1203 aa7.33□□□□□ -1.24
TRAPPC13-203ENST00000415825 TYRO3Q06418 890 aa7.32□□□□□ -1.24
TRAPPC13-203ENST00000415825 NCOA4Q13772 614 aa7.32□□□□□ -1.24
TRAPPC13-203ENST00000415825 WFDC12Q8WWY7 111 aa7.32□□□□□ -1.24
TRAPPC13-203ENST00000415825 SUSD3Q96L08 255 aa7.32□□□□□ -1.24
TRAPPC13-203ENST00000415825 DNAJB12Q9NXW2 375 aaKnown RBP7.32□□□□□ -1.24
TRAPPC13-203ENST00000415825 IREB2P48200 963 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-203ENST00000415825 IRAK1P51617 712 aa7.31□□□□□ -1.24
TRAPPC13-203ENST00000415825 AFF1P51825 1210 aaKnown RBP7.31□□□□□ -1.24
TRAPPC13-203ENST00000415825 WFDC8Q8IUA0 241 aa7.31□□□□□ -1.24
TRAPPC13-203ENST00000415825 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.31□□□□□ -1.24
TRAPPC13-203ENST00000415825 BRPF1P55201 1214 aaPredicted RBP7.3□□□□□ -1.24
TRAPPC13-203ENST00000415825 FAM35AQ86V20 835 aa7.3□□□□□ -1.24
TRAPPC13-203ENST00000415825 TPCN2Q8NHX9 752 aa7.3□□□□□ -1.24
TRAPPC13-203ENST00000415825 DCAF11Q8TEB1 546 aa7.3□□□□□ -1.24
TRAPPC13-203ENST00000415825 PPP1R12BO60237 982 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC13-203ENST00000415825 HIRAP54198 1017 aaPredicted RBP7.29□□□□□ -1.24
TRAPPC13-203ENST00000415825 MSL1Q68DK7 614 aa7.29□□□□□ -1.24
TRAPPC13-203ENST00000415825 ELMSAN1Q6PJG2 1045 aa7.29□□□□□ -1.24
TRAPPC13-203ENST00000415825 IGF2-ASQ6U949 168 aa7.29□□□□□ -1.24
TRAPPC13-203ENST00000415825 BTLAQ7Z6A9 289 aa7.29□□□□□ -1.24
TRAPPC13-203ENST00000415825 USP17L5A8MUK1 530 aa7.28□□□□□ -1.24
TRAPPC13-203ENST00000415825 PIK3CDO00329 1044 aa7.28□□□□□ -1.24
TRAPPC13-203ENST00000415825 EPHA4P54764 986 aa7.28□□□□□ -1.24
TRAPPC13-203ENST00000415825 CCINQ13939 588 aa7.28□□□□□ -1.24
TRAPPC13-203ENST00000415825 CCDC102BQ68D86 513 aa7.28□□□□□ -1.24
TRAPPC13-203ENST00000415825 FBXO11Q86XK2 927 aa7.28□□□□□ -1.24
TRAPPC13-203ENST00000415825 GSC2O15499 205 aa7.27□□□□□ -1.25
TRAPPC13-203ENST00000415825 CPB1P15086 417 aa7.27□□□□□ -1.25
TRAPPC13-203ENST00000415825 NFKB1P19838 968 aa7.27□□□□□ -1.25
TRAPPC13-203ENST00000415825 SH3PXD2AQ5TCZ1 1133 aa7.27□□□□□ -1.25
TRAPPC13-203ENST00000415825 PRR23CQ6ZRP0 262 aa7.27□□□□□ -1.25
TRAPPC13-203ENST00000415825 SSBP4Q9BWG4 385 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC13-203ENST00000415825 TSPAN10Q9H1Z9 355 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC13-203ENST00000415825 COL17A1Q9UMD9 1497 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC13-203ENST00000415825 SSTR4P31391 388 aa7.26□□□□□ -1.25
TRAPPC13-203ENST00000415825 DEPDC4Q8N2C3 294 aa7.26□□□□□ -1.25
TRAPPC13-203ENST00000415825 ZNF280CQ8ND82 737 aa7.26□□□□□ -1.25
TRAPPC13-203ENST00000415825 C7orf43Q8WVR3 580 aa7.26□□□□□ -1.25
TRAPPC13-203ENST00000415825 NGLY1Q96IV0 654 aa7.26□□□□□ -1.25
TRAPPC13-203ENST00000415825 FRRS1LQ9P0K9 344 aa7.26□□□□□ -1.25
TRAPPC13-203ENST00000415825 NOS3P29474 1203 aa7.25□□□□□ -1.25
TRAPPC13-203ENST00000415825 ALDH16A1Q8IZ83 802 aa7.25□□□□□ -1.25
TRAPPC13-203ENST00000415825 PALM3A6NDB9 673 aaPredicted RBP7.24□□□□□ -1.25
TRAPPC13-203ENST00000415825 M0R2N6 131 aa7.24□□□□□ -1.25
TRAPPC13-203ENST00000415825 FSTP19883 344 aa7.24□□□□□ -1.25
TRAPPC13-203ENST00000415825 AKTIPQ9H8T0 292 aa7.24□□□□□ -1.25
TRAPPC13-203ENST00000415825 GAS2L2Q8NHY3 880 aa7.23□□□□□ -1.25
TRAPPC13-203ENST00000415825 CHMP7Q8WUX9 453 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-203ENST00000415825 GSX2Q9BZM3 304 aa7.23□□□□□ -1.25
TRAPPC13-203ENST00000415825 MRPL18Q9H0U6 180 aaKnown RBP7.23□□□□□ -1.25
TRAPPC13-203ENST00000415825 GRIK1P39086 918 aa7.22□□□□□ -1.25
TRAPPC13-203ENST00000415825 IER5Q5VY09 327 aa7.22□□□□□ -1.25
TRAPPC13-203ENST00000415825 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
TRAPPC13-203ENST00000415825 LARGE2Q8N3Y3 721 aa7.22□□□□□ -1.25
TRAPPC13-203ENST00000415825 RBSNQ9H1K0 784 aa7.22□□□□□ -1.25
TRAPPC13-203ENST00000415825 RAD21O60216 631 aa7.21□□□□□ -1.26
TRAPPC13-203ENST00000415825 MEGF10Q96KG7 1140 aa7.21□□□□□ -1.26
TRAPPC13-203ENST00000415825 KRTAP9-9Q9BYP9 154 aa7.21□□□□□ -1.26
TRAPPC13-203ENST00000415825 KRTAP9-4Q9BYQ2 154 aa7.21□□□□□ -1.26
TRAPPC13-203ENST00000415825 NAGPAQ9UK23 515 aa7.21□□□□□ -1.26
TRAPPC13-203ENST00000415825 RNF114Q9Y508 228 aa7.21□□□□□ -1.26
TRAPPC13-203ENST00000415825 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
TRAPPC13-203ENST00000415825 MAP3K6O95382 1288 aa7.2□□□□□ -1.26
TRAPPC13-203ENST00000415825 EIF2AK2P19525 551 aaKnown RBP7.2□□□□□ -1.26
TRAPPC13-203ENST00000415825 DHX32Q7L7V1 743 aaKnown RBP7.2□□□□□ -1.26
TRAPPC13-203ENST00000415825 STAG2Q8N3U4 1231 aa7.2□□□□□ -1.26
TRAPPC13-203ENST00000415825 OGFOD1Q8N543 542 aa7.2□□□□□ -1.26
TRAPPC13-203ENST00000415825 SRA1Q9HD15 236 aaKnown RBP7.2□□□□□ -1.26
TRAPPC13-203ENST00000415825 ATAD2Q6PL18 1390 aa7.2□□□□□ -1.26
TRAPPC13-203ENST00000415825 USP17L3A6NCW0 530 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 USP17L4A6NCW7 530 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 RARAP10276 462 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 GLB1P16278 677 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 RTN1Q16799 776 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 PERM1Q5SV97 790 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 USP17L2Q6R6M4 530 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 USP17L1Q7RTZ2 530 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 KRT25Q7Z3Z0 450 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 MAP4K3Q8IVH8 894 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 PLEKHM2Q8IWE5 1019 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 SCG3Q8WXD2 468 aaKnown RBP7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 TTC9Q92623 222 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 ALG2Q9H553 416 aa7.19□□□□□ -1.26
TRAPPC13-203ENST00000415825 POTEAQ6S8J7 498 aa7.18□□□□□ -1.26
TRAPPC13-203ENST00000415825 TSEN2Q8NCE0 465 aaKnown RBP7.18□□□□□ -1.26
TRAPPC13-203ENST00000415825 FMNL2Q96PY5 1086 aa7.18□□□□□ -1.26
TRAPPC13-203ENST00000415825 LPIN3Q9BQK8 851 aa7.18□□□□□ -1.26
TRAPPC13-203ENST00000415825 SMG9Q9H0W8 520 aaKnown RBP7.18□□□□□ -1.26
TRAPPC13-203ENST00000415825 STOML1Q9UBI4 398 aa7.18□□□□□ -1.26
TRAPPC13-203ENST00000415825 GHRHP01286 108 aa7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 TAL1P17542 331 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC13-203ENST00000415825 CD97P48960 835 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms