RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 C1orf53Q5VUE5 145 aa5.54□□□□□ -1.52
LINC00428-201ENST00000415620 ILDR2Q71H61 639 aa5.54□□□□□ -1.52
LINC00428-201ENST00000415620 SLC9A9Q8IVB4 645 aa5.54□□□□□ -1.52
LINC00428-201ENST00000415620 NUDT8Q8WV74 236 aa5.54□□□□□ -1.52
LINC00428-201ENST00000415620 ALG2Q9H553 416 aa5.54□□□□□ -1.52
LINC00428-201ENST00000415620 IGFLR1Q9H665 355 aa5.54□□□□□ -1.52
LINC00428-201ENST00000415620 EFCC1Q9HA90 598 aa5.54□□□□□ -1.52
LINC00428-201ENST00000415620 SFI1A8K8P3 1242 aa5.53□□□□□ -1.52
LINC00428-201ENST00000415620 AFF1P51825 1210 aaKnown RBP5.53□□□□□ -1.52
LINC00428-201ENST00000415620 SLC51AQ86UW1 340 aa5.53□□□□□ -1.52
LINC00428-201ENST00000415620 DMRTC2Q8IXT2 367 aaPredicted RBP5.53□□□□□ -1.52
LINC00428-201ENST00000415620 WFDC12Q8WWY7 111 aa5.53□□□□□ -1.52
LINC00428-201ENST00000415620 SLC6A14Q9UN76 642 aa5.53□□□□□ -1.52
LINC00428-201ENST00000415620 CHMP3Q9Y3E7 222 aa5.53□□□□□ -1.52
LINC00428-201ENST00000415620 RGS9O75916 674 aaPredicted RBP5.52□□□□□ -1.53
LINC00428-201ENST00000415620 SKIP12755 728 aa5.52□□□□□ -1.53
LINC00428-201ENST00000415620 IREB2P48200 963 aaKnown RBP5.52□□□□□ -1.53
LINC00428-201ENST00000415620 NCOA4Q13772 614 aa5.52□□□□□ -1.53
LINC00428-201ENST00000415620 MCM6Q14566 821 aa5.52□□□□□ -1.53
LINC00428-201ENST00000415620 TBCELQ5QJ74 424 aa5.52□□□□□ -1.53
LINC00428-201ENST00000415620 PSAPL1Q6NUJ1 521 aa5.52□□□□□ -1.53
LINC00428-201ENST00000415620 TNS4Q8IZW8 715 aa5.52□□□□□ -1.53
LINC00428-201ENST00000415620 DTWD1Q8N5C7 304 aa5.52□□□□□ -1.53
LINC00428-201ENST00000415620 FMNL2Q96PY5 1086 aa5.52□□□□□ -1.53
LINC00428-201ENST00000415620 ZBTB7BO15156 539 aaPredicted RBP5.51□□□□□ -1.53
LINC00428-201ENST00000415620 TYRO3Q06418 890 aa5.51□□□□□ -1.53
LINC00428-201ENST00000415620 HSH2DQ96JZ2 352 aa5.51□□□□□ -1.53
LINC00428-201ENST00000415620 IRAK1P51617 712 aa5.5□□□□□ -1.53
LINC00428-201ENST00000415620 PSMA6P60900 246 aaKnown RBP5.5□□□□□ -1.53
LINC00428-201ENST00000415620 MSL1Q68DK7 614 aa5.5□□□□□ -1.53
LINC00428-201ENST00000415620 PRR23CQ6ZRP0 262 aa5.5□□□□□ -1.53
LINC00428-201ENST00000415620 FBXO11Q86XK2 927 aa5.5□□□□□ -1.53
LINC00428-201ENST00000415620 SUSD3Q96L08 255 aa5.5□□□□□ -1.53
LINC00428-201ENST00000415620 DNAJB12Q9NXW2 375 aaKnown RBP5.5□□□□□ -1.53
LINC00428-201ENST00000415620 KIAA1024Q9UPX6 916 aa5.5□□□□□ -1.53
LINC00428-201ENST00000415620 COG6Q9Y2V7 657 aa5.5□□□□□ -1.53
LINC00428-201ENST00000415620 HCN4Q9Y3Q4 1203 aa5.5□□□□□ -1.53
LINC00428-201ENST00000415620 USP17L5A8MUK1 530 aa5.49□□□□□ -1.53
LINC00428-201ENST00000415620 M0R2N6 131 aa5.49□□□□□ -1.53
LINC00428-201ENST00000415620 NOS3P29474 1203 aa5.49□□□□□ -1.53
LINC00428-201ENST00000415620 IGF2-ASQ6U949 168 aa5.49□□□□□ -1.53
LINC00428-201ENST00000415620 PNMA5Q96PV4 448 aa5.49□□□□□ -1.53
LINC00428-201ENST00000415620 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
LINC00428-201ENST00000415620 TSPAN10Q9H1Z9 355 aaPredicted RBP5.49□□□□□ -1.53
LINC00428-201ENST00000415620 EIF4G1Q04637 1599 aaKnown RBP5.48□□□□□ -1.53
LINC00428-201ENST00000415620 SSTR4P31391 388 aa5.48□□□□□ -1.53
LINC00428-201ENST00000415620 PCSK7Q16549 785 aa5.48□□□□□ -1.53
LINC00428-201ENST00000415620 HIF1AQ16665 826 aa5.48□□□□□ -1.53
LINC00428-201ENST00000415620 PLEKHM2Q8IWE5 1019 aa5.48□□□□□ -1.53
LINC00428-201ENST00000415620 ZNF280CQ8ND82 737 aa5.48□□□□□ -1.53
LINC00428-201ENST00000415620 DKK1O94907 266 aa5.47□□□□□ -1.53
LINC00428-201ENST00000415620 FSTP19883 344 aa5.47□□□□□ -1.53
LINC00428-201ENST00000415620 CLDN10P78369 228 aa5.47□□□□□ -1.53
LINC00428-201ENST00000415620 TRIM50Q86XT4 487 aa5.47□□□□□ -1.53
LINC00428-201ENST00000415620 MEGF10Q96KG7 1140 aa5.47□□□□□ -1.53
LINC00428-201ENST00000415620 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.47□□□□□ -1.53
LINC00428-201ENST00000415620 C21orf2O43822 256 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 CCINQ13939 588 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 CCDC102BQ68D86 513 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 BTLAQ7Z6A9 289 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 FAM35AQ86V20 835 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 WFDC8Q8IUA0 241 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 DEPDC4Q8N2C3 294 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 STAG2Q8N3U4 1231 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 TPCN2Q8NHX9 752 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 GSX2Q9BZM3 304 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 FRRS1LQ9P0K9 344 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 NAGPAQ9UK23 515 aa5.46□□□□□ -1.54
LINC00428-201ENST00000415620 PTCD1O75127 700 aaKnown RBP5.45□□□□□ -1.54
LINC00428-201ENST00000415620 TAL1P17542 331 aaPredicted RBP5.45□□□□□ -1.54
LINC00428-201ENST00000415620 CD97P48960 835 aa5.45□□□□□ -1.54
LINC00428-201ENST00000415620 SIX5Q8N196 739 aa5.45□□□□□ -1.54
LINC00428-201ENST00000415620 ADAMTS19Q8TE59 1207 aa5.45□□□□□ -1.54
LINC00428-201ENST00000415620 NACADO15069 1562 aa5.45□□□□□ -1.54
LINC00428-201ENST00000415620 CPB1P15086 417 aa5.44□□□□□ -1.54
LINC00428-201ENST00000415620 NFKB1P19838 968 aa5.44□□□□□ -1.54
LINC00428-201ENST00000415620 ATP1A2P50993 1020 aa5.44□□□□□ -1.54
LINC00428-201ENST00000415620 IER5Q5VY09 327 aa5.44□□□□□ -1.54
LINC00428-201ENST00000415620 DZIP1LQ8IYY4 767 aaKnown RBP5.44□□□□□ -1.54
LINC00428-201ENST00000415620 LARGE2Q8N3Y3 721 aa5.44□□□□□ -1.54
LINC00428-201ENST00000415620 AKTIPQ9H8T0 292 aa5.44□□□□□ -1.54
LINC00428-201ENST00000415620 RNF114Q9Y508 228 aa5.44□□□□□ -1.54
LINC00428-201ENST00000415620 USP17L3A6NCW0 530 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 USP17L4A6NCW7 530 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 GSC2O15499 205 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 FZD5Q13467 585 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 GRIK5Q16478 980 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 ELMSAN1Q6PJG2 1045 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 USP17L2Q6R6M4 530 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 USP17L1Q7RTZ2 530 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 ALDH16A1Q8IZ83 802 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 TTC9Q92623 222 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 UCN2Q96RP3 112 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 LPIN3Q9BQK8 851 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 C2orf49Q9BVC5 232 aaPredicted RBP5.43□□□□□ -1.54
LINC00428-201ENST00000415620 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 DMGDHQ9UI17 866 aaKnown RBP5.43□□□□□ -1.54
LINC00428-201ENST00000415620 ERCC6Q03468 1493 aa5.43□□□□□ -1.54
LINC00428-201ENST00000415620 PPP1R12BO60237 982 aaPredicted RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms