RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 ANKRD36CQ5JPF3 1778 aa32.46■■■□□ 2.79
HLA-C-204ENST00000415537 GNAI1P63096 354 aa32.46■■■□□ 2.79
HLA-C-204ENST00000415537 UTP14AQ9BVJ6 771 aaKnown RBP32.46■■■□□ 2.79
HLA-C-204ENST00000415537 IFT57Q9NWB7 429 aa32.46■■■□□ 2.79
HLA-C-204ENST00000415537 RIC1Q4ADV7 1423 aa32.45■■■□□ 2.79
HLA-C-204ENST00000415537 DUSP27Q5VZP5 1158 aa32.45■■■□□ 2.79
HLA-C-204ENST00000415537 RTKN2Q8IZC4 609 aa32.45■■■□□ 2.79
HLA-C-204ENST00000415537 DBF4Q9UBU7 674 aaPredicted RBP32.45■■■□□ 2.79
HLA-C-204ENST00000415537 ANP32CO43423 234 aa32.44■■■□□ 2.78
HLA-C-204ENST00000415537 ZNF853P0CG23 659 aa32.44■■■□□ 2.78
HLA-C-204ENST00000415537 CCDC184Q52MB2 194 aa32.44■■■□□ 2.78
HLA-C-204ENST00000415537 VEGFAP15692 232 aaPredicted RBP32.43■■■□□ 2.78
HLA-C-204ENST00000415537 FKBP4Q02790 459 aaKnown RBP eCLIP32.42■■■□□ 2.78
HLA-C-204ENST00000415537 RBM17Q96I25 401 aaKnown RBP32.42■■■□□ 2.78
HLA-C-204ENST00000415537 NLRP3Q96P20 1036 aa32.42■■■□□ 2.78
HLA-C-204ENST00000415537 TCIRG1Q13488 830 aa32.41■■■□□ 2.78
HLA-C-204ENST00000415537 HOXA10P31260 410 aaPredicted RBP32.4■■■□□ 2.78
HLA-C-204ENST00000415537 OLFM4Q6UX06 510 aa32.4■■■□□ 2.78
HLA-C-204ENST00000415537 HYPKQ9NX55 129 aa32.4■■■□□ 2.78
HLA-C-204ENST00000415537 FSTL1Q12841 308 aa32.39■■■□□ 2.78
HLA-C-204ENST00000415537 RNF123Q5XPI4 1314 aa32.39■■■□□ 2.78
HLA-C-204ENST00000415537 APLP1P51693 650 aa32.38■■■□□ 2.77
HLA-C-204ENST00000415537 ANKRD13DQ6ZTN6 518 aa32.38■■■□□ 2.77
HLA-C-204ENST00000415537 NLRP10Q86W26 655 aa32.38■■■□□ 2.77
HLA-C-204ENST00000415537 PLBD2Q8NHP8 589 aa32.38■■■□□ 2.77
HLA-C-204ENST00000415537 SLC10A5Q5PT55 438 aa32.37■■■□□ 2.77
HLA-C-204ENST00000415537 CC2D2BQ6DHV5 1058 aa32.37■■■□□ 2.77
HLA-C-204ENST00000415537 CRAMP1Q96RY5 1269 aa32.37■■■□□ 2.77
HLA-C-204ENST00000415537 MRS2Q9HD23 443 aa32.37■■■□□ 2.77
HLA-C-204ENST00000415537 ZNF277Q9NRM2 450 aaPredicted RBP32.37■■■□□ 2.77
HLA-C-204ENST00000415537 WDR90Q96KV7 1748 aa32.37■■■□□ 2.77
HLA-C-204ENST00000415537 ELL2O00472 640 aaPredicted RBP32.36■■■□□ 2.77
HLA-C-204ENST00000415537 TRMT112Q9UI30 125 aaKnown RBP32.36■■■□□ 2.77
HLA-C-204ENST00000415537 SYNE4Q8N205 404 aa32.35■■■□□ 2.77
HLA-C-204ENST00000415537 SMC1BQ8NDV3 1235 aa32.35■■■□□ 2.77
HLA-C-204ENST00000415537 C3orf67Q6ZVT6 689 aa32.34■■■□□ 2.77
HLA-C-204ENST00000415537 CEP350Q5VT06 3117 aa32.33■■■□□ 2.77
HLA-C-204ENST00000415537 TMX4Q9H1E5 349 aaPredicted RBP32.33■■■□□ 2.77
HLA-C-204ENST00000415537 SH3TC1Q8TE82 1336 aa32.32■■■□□ 2.76
HLA-C-204ENST00000415537 PPEF1O14829 653 aaPredicted RBP32.32■■■□□ 2.76
HLA-C-204ENST00000415537 DDNO94850 711 aaPredicted RBP32.32■■■□□ 2.76
HLA-C-204ENST00000415537 GRIPAP1Q4V328 841 aa32.32■■■□□ 2.76
HLA-C-204ENST00000415537 CHMP4AQ9BY43 222 aa32.32■■■□□ 2.76
HLA-C-204ENST00000415537 TCERG1O14776 1098 aaKnown RBP32.31■■■□□ 2.76
HLA-C-204ENST00000415537 IARSP41252 1262 aaKnown RBP32.31■■■□□ 2.76
HLA-C-204ENST00000415537 PSMD1Q99460 953 aa32.31■■■□□ 2.76
HLA-C-204ENST00000415537 POTECB2RU33 542 aa32.3■■■□□ 2.76
HLA-C-204ENST00000415537 HCLS1P14317 486 aaPredicted RBP32.3■■■□□ 2.76
HLA-C-204ENST00000415537 LAMB2P55268 1798 aa32.3■■■□□ 2.76
HLA-C-204ENST00000415537 CCDC27Q2M243 656 aa32.29■■■□□ 2.76
HLA-C-204ENST00000415537 C8orf58Q8NAV2 365 aa32.29■■■□□ 2.76
HLA-C-204ENST00000415537 RIC3Q7Z5B4 369 aa32.28■■■□□ 2.76
HLA-C-204ENST00000415537 GOLGA2Q08379 1002 aa32.27■■■□□ 2.76
HLA-C-204ENST00000415537 JDP2Q8WYK2 163 aa32.27■■■□□ 2.76
HLA-C-204ENST00000415537 ZNF428Q96B54 188 aa32.27■■■□□ 2.76
HLA-C-204ENST00000415537 ATP5J2-PTCD1G3V325 749 aa32.26■■■□□ 2.75
HLA-C-204ENST00000415537 CCDC30Q5VVM6 783 aa32.26■■■□□ 2.75
HLA-C-204ENST00000415537 WWC1Q8IX03 1113 aa32.26■■■□□ 2.75
HLA-C-204ENST00000415537 ISCA1Q9BUE6 129 aa32.26■■■□□ 2.75
HLA-C-204ENST00000415537 SNED1Q8TER0 1413 aa32.26■■■□□ 2.75
HLA-C-204ENST00000415537 ABCC4O15439 1325 aa32.26■■■□□ 2.75
HLA-C-204ENST00000415537 DDX46Q7L014 1031 aaKnown RBP32.25■■■□□ 2.75
HLA-C-204ENST00000415537 PHAXQ9H814 394 aaKnown RBP32.25■■■□□ 2.75
HLA-C-204ENST00000415537 IQCA1LA6NCM1 817 aa32.24■■■□□ 2.75
HLA-C-204ENST00000415537 BBOX1O75936 387 aa32.23■■■□□ 2.75
HLA-C-204ENST00000415537 TSR2Q969E8 191 aaKnown RBP32.23■■■□□ 2.75
HLA-C-204ENST00000415537 ATP6V0A2Q9Y487 856 aa32.23■■■□□ 2.75
HLA-C-204ENST00000415537 SCN4AP35499 1836 aa32.22■■■□□ 2.75
HLA-C-204ENST00000415537 FAM89AQ96GI7 184 aa32.22■■■□□ 2.75
HLA-C-204ENST00000415537 ZNF541Q9H0D2 1346 aa32.22■■■□□ 2.75
HLA-C-204ENST00000415537 FZD9O00144 591 aa32.21■■■□□ 2.75
HLA-C-204ENST00000415537 NCBP3Q53F19 620 aaKnown RBP32.21■■■□□ 2.75
HLA-C-204ENST00000415537 TSPYL6Q8N831 410 aa32.21■■■□□ 2.75
HLA-C-204ENST00000415537 L3MBTL3Q96JM7 780 aaPredicted RBP32.21■■■□□ 2.75
HLA-C-204ENST00000415537 DDX60Q8IY21 1712 aaKnown RBP32.2■■■□□ 2.75
HLA-C-204ENST00000415537 DDX58O95786 925 aaKnown RBP32.2■■■□□ 2.75
HLA-C-204ENST00000415537 TRIM28Q13263 835 aaKnown RBP32.2■■■□□ 2.75
HLA-C-204ENST00000415537 LARGE2Q8N3Y3 721 aa32.2■■■□□ 2.75
HLA-C-204ENST00000415537 EIF6P56537 245 aaKnown RBP32.18■■■□□ 2.74
HLA-C-204ENST00000415537 GRAPQ13588 217 aa32.18■■■□□ 2.74
HLA-C-204ENST00000415537 RTL5Q5HYW3 569 aaPredicted RBP32.18■■■□□ 2.74
HLA-C-204ENST00000415537 SP8Q8IXZ3 490 aa32.18■■■□□ 2.74
HLA-C-204ENST00000415537 GRAPLQ8TC17 118 aaPredicted RBP32.18■■■□□ 2.74
HLA-C-204ENST00000415537 IL16Q14005 1332 aa32.18■■■□□ 2.74
HLA-C-204ENST00000415537 TAF1P21675 1872 aa32.17■■■□□ 2.74
HLA-C-204ENST00000415537 SLC51AQ86UW1 340 aa32.17■■■□□ 2.74
HLA-C-204ENST00000415537 MYD88Q99836 296 aa32.17■■■□□ 2.74
HLA-C-204ENST00000415537 STK31Q9BXU1 1019 aa32.17■■■□□ 2.74
HLA-C-204ENST00000415537 SALL2Q9Y467 1007 aaPredicted RBP32.17■■■□□ 2.74
HLA-C-204ENST00000415537 GPC2Q8N158 579 aa32.16■■■□□ 2.74
HLA-C-204ENST00000415537 SUPT20HQ8NEM7 779 aa32.16■■■□□ 2.74
HLA-C-204ENST00000415537 HTRA3P83110 453 aa32.15■■■□□ 2.74
HLA-C-204ENST00000415537 TWISTNBQ3B726 338 aaPredicted RBP32.15■■■□□ 2.74
HLA-C-204ENST00000415537 DNAJC5GQ8N7S2 189 aa32.15■■■□□ 2.74
HLA-C-204ENST00000415537 IRS4O14654 1257 aaPredicted RBP32.14■■■□□ 2.74
HLA-C-204ENST00000415537 PPIP5K2O43314 1243 aa32.14■■■□□ 2.74
HLA-C-204ENST00000415537 CHADLQ6NUI6 762 aa32.14■■■□□ 2.74
HLA-C-204ENST00000415537 DPP8Q6V1X1 898 aaPredicted RBP32.14■■■□□ 2.74
HLA-C-204ENST00000415537 TMC4Q7Z404 712 aa32.14■■■□□ 2.74
HLA-C-204ENST00000415537 NIM1KQ8IY84 436 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms