RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ATRNO75882 1429 aa24.47■■□□□ 1.51
AP1S3-205ENST00000415298 TAF7Q15545 349 aaPredicted RBP24.47■■□□□ 1.51
AP1S3-205ENST00000415298 KRT222Q8N1A0 295 aa24.47■■□□□ 1.51
AP1S3-205ENST00000415298 RNF217Q8TC41 542 aa24.47■■□□□ 1.51
AP1S3-205ENST00000415298 CDCA7Q9BWT1 371 aaPredicted RBP24.46■■□□□ 1.51
AP1S3-205ENST00000415298 KAT6BQ8WYB5 2073 aa24.46■■□□□ 1.51
AP1S3-205ENST00000415298 PLEKHG2Q9H7P9 1386 aa24.46■■□□□ 1.51
AP1S3-205ENST00000415298 TMX1Q9H3N1 280 aa24.46■■□□□ 1.51
AP1S3-205ENST00000415298 TSPYL4Q9UJ04 414 aa24.46■■□□□ 1.51
AP1S3-205ENST00000415298 RAD50Q92878 1312 aa24.46■■□□□ 1.51
AP1S3-205ENST00000415298 KCNQ3O43525 872 aa24.45■■□□□ 1.51
AP1S3-205ENST00000415298 SMC5Q8IY18 1101 aa24.45■■□□□ 1.5
AP1S3-205ENST00000415298 TSPYL6Q8N831 410 aa24.45■■□□□ 1.5
AP1S3-205ENST00000415298 MARCH10Q8NA82 808 aaPredicted RBP24.45■■□□□ 1.5
AP1S3-205ENST00000415298 NKX1-1Q15270 411 aaPredicted RBP24.44■■□□□ 1.5
AP1S3-205ENST00000415298 SYCP1Q15431 976 aa24.44■■□□□ 1.5
AP1S3-205ENST00000415298 ZSCAN23Q3MJ62 389 aa24.44■■□□□ 1.5
AP1S3-205ENST00000415298 GPATCH11Q8N954 259 aa24.44■■□□□ 1.5
AP1S3-205ENST00000415298 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.44■■□□□ 1.5
AP1S3-205ENST00000415298 SPTLC3Q9NUV7 552 aa24.44■■□□□ 1.5
AP1S3-205ENST00000415298 RGS17Q9UGC6 210 aaPredicted RBP24.44■■□□□ 1.5
AP1S3-205ENST00000415298 LRRC37A3O60309 1634 aa24.44■■□□□ 1.5
AP1S3-205ENST00000415298 KIF1CO43896 1103 aaKnown RBP24.43■■□□□ 1.5
AP1S3-205ENST00000415298 FAM182BQ5T319 152 aa24.43■■□□□ 1.5
AP1S3-205ENST00000415298 C8orf58Q8NAV2 365 aa24.43■■□□□ 1.5
AP1S3-205ENST00000415298 SCN11AQ9UI33 1791 aa24.43■■□□□ 1.5
AP1S3-205ENST00000415298 CHAF1AQ13111 956 aaPredicted RBP24.43■■□□□ 1.5
AP1S3-205ENST00000415298 SLC52A2Q9HAB3 445 aa24.43■■□□□ 1.5
AP1S3-205ENST00000415298 TNS2Q63HR2 1409 aa24.43■■□□□ 1.5
AP1S3-205ENST00000415298 ILDR1Q86SU0 546 aaPredicted RBP24.42■■□□□ 1.5
AP1S3-205ENST00000415298 BTBD11A6QL63 1104 aa24.42■■□□□ 1.5
AP1S3-205ENST00000415298 RIOK3O14730 519 aaKnown RBP24.42■■□□□ 1.5
AP1S3-205ENST00000415298 SLC39A6Q13433 755 aa24.42■■□□□ 1.5
AP1S3-205ENST00000415298 EP400Q96L91 3159 aa24.42■■□□□ 1.5
AP1S3-205ENST00000415298 OS9Q13438 667 aaPredicted RBP24.41■■□□□ 1.5
AP1S3-205ENST00000415298 CLEC17AQ6ZS10 378 aa24.41■■□□□ 1.5
AP1S3-205ENST00000415298 ADAMTS7Q9UKP4 1686 aa24.41■■□□□ 1.5
AP1S3-205ENST00000415298 CYP2C19P33261 490 aa24.41■■□□□ 1.5
AP1S3-205ENST00000415298 CASQ1P31415 396 aa24.4■■□□□ 1.5
AP1S3-205ENST00000415298 PRIM1P49642 420 aaKnown RBP24.4■■□□□ 1.5
AP1S3-205ENST00000415298 CABP4P57796 275 aa24.4■■□□□ 1.5
AP1S3-205ENST00000415298 ZNF772Q68DY9 489 aaPredicted RBP24.4■■□□□ 1.5
AP1S3-205ENST00000415298 SEPT12Q8IYM1 358 aa24.39■■□□□ 1.5
AP1S3-205ENST00000415298 C22orf23Q9BZE7 217 aa24.39■■□□□ 1.5
AP1S3-205ENST00000415298 ONECUT3O60422 494 aaPredicted RBP24.39■■□□□ 1.49
AP1S3-205ENST00000415298 KIF18AQ8NI77 898 aa24.39■■□□□ 1.49
AP1S3-205ENST00000415298 GOLGA6L6A8MZA4 724 aa24.38■■□□□ 1.49
AP1S3-205ENST00000415298 NCBP1Q09161 790 aaKnown RBP24.38■■□□□ 1.49
AP1S3-205ENST00000415298 NBPF11Q86T75 865 aa24.38■■□□□ 1.49
AP1S3-205ENST00000415298 ACSBG1Q96GR2 724 aa24.37■■□□□ 1.49
AP1S3-205ENST00000415298 BCL2L13Q9BXK5 485 aa24.37■■□□□ 1.49
AP1S3-205ENST00000415298 BCAR3O75815 825 aa24.37■■□□□ 1.49
AP1S3-205ENST00000415298 MNS1Q8NEH6 495 aa24.37■■□□□ 1.49
AP1S3-205ENST00000415298 SYTL4Q96C24 671 aaPredicted RBP24.37■■□□□ 1.49
AP1S3-205ENST00000415298 SGSM3Q96HU1 749 aa24.37■■□□□ 1.49
AP1S3-205ENST00000415298 TOGARAM1Q9Y4F4 1720 aa24.36■■□□□ 1.49
AP1S3-205ENST00000415298 REC8O95072 547 aa24.36■■□□□ 1.49
AP1S3-205ENST00000415298 IGHDP01880 384 aa24.36■■□□□ 1.49
AP1S3-205ENST00000415298 TDO2P48775 406 aa24.36■■□□□ 1.49
AP1S3-205ENST00000415298 MPNDQ8N594 471 aa24.36■■□□□ 1.49
AP1S3-205ENST00000415298 SIPA1L3O60292 1781 aaPredicted RBP24.36■■□□□ 1.49
AP1S3-205ENST00000415298 ERVV-2B6SEH9 535 aa24.35■■□□□ 1.49
AP1S3-205ENST00000415298 VAMP4O75379 141 aa24.35■■□□□ 1.49
AP1S3-205ENST00000415298 CAVIN1Q6NZI2 390 aaKnown RBP24.35■■□□□ 1.49
AP1S3-205ENST00000415298 TWISTNBQ3B726 338 aaPredicted RBP24.35■■□□□ 1.49
AP1S3-205ENST00000415298 POTEAQ6S8J7 498 aa24.35■■□□□ 1.49
AP1S3-205ENST00000415298 MED4Q9NPJ6 270 aa24.35■■□□□ 1.49
AP1S3-205ENST00000415298 TOMM22Q9NS69 142 aa24.35■■□□□ 1.49
AP1S3-205ENST00000415298 THSD7AQ9UPZ6 1657 aa24.35■■□□□ 1.49
AP1S3-205ENST00000415298 SNX21Q969T3 373 aa24.34■■□□□ 1.49
AP1S3-205ENST00000415298 EIF4A1P60842 406 aaKnown RBP24.33■■□□□ 1.49
AP1S3-205ENST00000415298 ZNF790Q6PG37 636 aa24.33■■□□□ 1.49
AP1S3-205ENST00000415298 PIGBQ92521 554 aa24.33■■□□□ 1.49
AP1S3-205ENST00000415298 NBPF9Q3BBW0 867 aa24.33■■□□□ 1.49
AP1S3-205ENST00000415298 KCNQ2O43526 872 aa24.32■■□□□ 1.48
AP1S3-205ENST00000415298 HMGB1P09429 215 aaKnown RBP24.32■■□□□ 1.48
AP1S3-205ENST00000415298 RARSP54136 660 aaKnown RBP24.32■■□□□ 1.48
AP1S3-205ENST00000415298 RBM6P78332 1123 aaKnown RBP24.32■■□□□ 1.48
AP1S3-205ENST00000415298 SETQ01105 290 aaPredicted RBP24.32■■□□□ 1.48
AP1S3-205ENST00000415298 RBM28Q9NW13 759 aaKnown RBP24.32■■□□□ 1.48
AP1S3-205ENST00000415298 FAM53CQ9NYF3 392 aa24.32■■□□□ 1.48
AP1S3-205ENST00000415298 PRAMEF22A3QJZ6 481 aa24.32■■□□□ 1.48
AP1S3-205ENST00000415298 GYS2P54840 703 aa24.32■■□□□ 1.48
AP1S3-205ENST00000415298 MUM1L1Q5H9M0 696 aa24.32■■□□□ 1.48
AP1S3-205ENST00000415298 CXorf56Q9H5V9 222 aa24.31■■□□□ 1.48
AP1S3-205ENST00000415298 BABAM1Q9NWV8 329 aa24.31■■□□□ 1.48
AP1S3-205ENST00000415298 TMOD3Q9NYL9 352 aa24.31■■□□□ 1.48
AP1S3-205ENST00000415298 JRKLQ9Y4A0 524 aa24.31■■□□□ 1.48
AP1S3-205ENST00000415298 MRC1P22897 1456 aa24.31■■□□□ 1.48
AP1S3-205ENST00000415298 TTC36A6NLP5 189 aa24.31■■□□□ 1.48
AP1S3-205ENST00000415298 PTF1AQ7RTS3 328 aa24.31■■□□□ 1.48
AP1S3-205ENST00000415298 SUFUQ9UMX1 484 aa24.31■■□□□ 1.48
AP1S3-205ENST00000415298 NECTIN2Q92692 538 aa24.3■■□□□ 1.48
AP1S3-205ENST00000415298 ASAP1Q9ULH1 1129 aa24.3■■□□□ 1.48
AP1S3-205ENST00000415298 KDM3BQ7LBC6 1761 aa24.3■■□□□ 1.48
AP1S3-205ENST00000415298 SSH1Q8WYL5 1049 aa24.29■■□□□ 1.48
AP1S3-205ENST00000415298 ZNF496Q96IT1 587 aaPredicted RBP24.29■■□□□ 1.48
AP1S3-205ENST00000415298 ITGB4P16144 1822 aa24.29■■□□□ 1.48
AP1S3-205ENST00000415298 BAG4O95429 457 aaKnown RBP24.29■■□□□ 1.48
AP1S3-205ENST00000415298 RXRBP28702 533 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms