RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 NUP88Q99567 741 aaPredicted RBP12.22□□□□□ -0.45
SCN5A-204ENST00000414099 CHMP4BP1P59074 171 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 CKAP4Q07065 602 aaKnown RBP12.22□□□□□ -0.45
SCN5A-204ENST00000414099 CEP112Q8N8E3 955 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 NAIPQ13075 1403 aa12.22□□□□□ -0.45
SCN5A-204ENST00000414099 DUOX2Q9NRD8 1548 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 PIK3R4Q99570 1358 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 SETD1BQ9UPS6 1966 aaKnown RBP12.21□□□□□ -0.45
SCN5A-204ENST00000414099 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 TUBB4BP68371 445 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 TMTC2Q8N394 836 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 CCDC155Q8N6L0 562 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 DHX29Q7Z478 1369 aaKnown RBP12.21□□□□□ -0.45
SCN5A-204ENST00000414099 IFIT3O14879 490 aaKnown RBP12.21□□□□□ -0.45
SCN5A-204ENST00000414099 MYCNP04198 464 aaPredicted RBP12.21□□□□□ -0.45
SCN5A-204ENST00000414099 POLD1P28340 1107 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 DAAM2Q86T65 1068 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 IBSPP21815 317 aaPredicted RBP12.21□□□□□ -0.45
SCN5A-204ENST00000414099 SETDB2Q96T68 719 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 HMG20BQ9P0W2 317 aa12.21□□□□□ -0.45
SCN5A-204ENST00000414099 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.46
SCN5A-204ENST00000414099 BMP15O95972 392 aa12.21□□□□□ -0.46
SCN5A-204ENST00000414099 HMGB1P1B2RPK0 211 aaPredicted RBP12.21□□□□□ -0.46
SCN5A-204ENST00000414099 MCM5P33992 734 aa12.21□□□□□ -0.46
SCN5A-204ENST00000414099 UBE4AQ14139 1066 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 NBPF6Q5VWK0 638 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 APBB1IPQ7Z5R6 666 aaPredicted RBP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 NBPF5PQ86XG9 351 aaPredicted RBP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 SYCP3Q8IZU3 236 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 NBPF4Q96M43 638 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 SCAF11Q99590 1463 aaKnown RBP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 RASAL2Q9UJF2 1139 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 UBA5Q9GZZ9 404 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 NBPF8Q3BBV2 869 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 CTR9Q6PD62 1173 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 CCDC174Q6PII3 467 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 TBC1D5Q92609 795 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 BMS1Q14692 1282 aaKnown RBP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 RMND1Q9NWS8 449 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 SNRPA1P09661 255 aaKnown RBP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 GNAQP50148 359 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 MFSD6Q6ZSS7 791 aa12.2□□□□□ -0.46
SCN5A-204ENST00000414099 CCDC85AQ96PX6 553 aaPredicted RBP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 DDX19AQ9NUU7 478 aaKnown RBP12.2□□□□□ -0.46
SCN5A-204ENST00000414099 ZWINTO95229 277 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 RAB3IL1Q8TBN0 382 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 PLCG2P16885 1265 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 STX1AQ16623 288 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 TNRQ92752 1358 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 ZFYP08048 801 aaPredicted RBP12.19□□□□□ -0.46
SCN5A-204ENST00000414099 SPECC1Q5M775 1068 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 RNF187Q5TA31 235 aaPredicted RBP12.19□□□□□ -0.46
SCN5A-204ENST00000414099 HSF2BPO75031 334 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 ESPNB1AK53 854 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 KRT23Q9C075 422 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 GTPBP4Q9BZE4 634 aaKnown RBP12.19□□□□□ -0.46
SCN5A-204ENST00000414099 CNNM2Q9H8M5 875 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 BCCIPQ9P287 314 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCN5A-204ENST00000414099 SAMM50Q9Y512 469 aa12.19□□□□□ -0.46
SCN5A-204ENST00000414099 TSPY2A6NKD2 308 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 LMAN1P49257 510 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 ZNF804AQ7Z570 1209 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 IL1RAPL2Q9NP60 686 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 FOXO3O43524 673 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 BOLA2Q9H3K6 86 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 ERICH4A6NGS2 130 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 NBPF7P0C2Y1 421 aaPredicted RBP12.18□□□□□ -0.46
SCN5A-204ENST00000414099 PPP1R14CQ8TAE6 165 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 CFAP74Q9C0B2 1584 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 SLU7O95391 586 aaKnown RBP12.18□□□□□ -0.46
SCN5A-204ENST00000414099 LRSAM1Q6UWE0 723 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 RALGAPBQ86X10 1494 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 KDM5BQ9UGL1 1544 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 GOLGA8BA8MQT2 603 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 CDCA7LQ96GN5 454 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 CLIP2Q9UDT6 1046 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 MAP3K9P80192 1104 aa12.18□□□□□ -0.46
SCN5A-204ENST00000414099 MCM4P33991 863 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 TDRD12Q587J7 1177 aaKnown RBP12.17□□□□□ -0.46
SCN5A-204ENST00000414099 LDHAL6AQ6ZMR3 332 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 PAXBP1Q9Y5B6 917 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.17□□□□□ -0.46
SCN5A-204ENST00000414099 STX6O43752 255 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 TMEM57Q8N5G2 664 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 SELENOOQ9BVL4 669 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 TUBB4AP04350 444 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 TTC14Q96N46 770 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 MCM10Q7L590 875 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 WAPLQ7Z5K2 1190 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 RBM27Q9P2N5 1060 aaKnown RBP12.17□□□□□ -0.46
SCN5A-204ENST00000414099 ABCC5O15440 1437 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 TMEM67Q5HYA8 995 aa12.17□□□□□ -0.46
SCN5A-204ENST00000414099 TICAM2Q86XR7 235 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms