RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 ERFEQ4G0M1 354 aa13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 PRR5LQ6MZQ0 368 aa13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 CLUAP1Q96AJ1 413 aa13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 ISCA1Q9BUE6 129 aa13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 API5Q9BZZ5 524 aaKnown RBP13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 FHDC1Q9C0D6 1143 aaPredicted RBP13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 CWC25Q9NXE8 425 aaPredicted RBP13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 TNNQ9UQP3 1299 aa13.24□□□□□ -0.29
HLA-DMB-257ENST00000414017 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
HLA-DMB-257ENST00000414017 ZKSCAN2Q63HK3 967 aa13.23□□□□□ -0.29
HLA-DMB-257ENST00000414017 SYNE4Q8N205 404 aa13.23□□□□□ -0.29
HLA-DMB-257ENST00000414017 ANKRD36CQ5JPF3 1778 aa13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 NEURL1BA8MQ27 555 aa13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 PLIN1O60240 522 aa13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 NTSR2O95665 410 aa13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 FTSJ3Q8IY81 847 aaKnown RBP13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 CCDC191Q8NCU4 936 aa13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 FAM89AQ96GI7 184 aa13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 SRCIN1Q9C0H9 1055 aa13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
HLA-DMB-257ENST00000414017 HCLS1P14317 486 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-257ENST00000414017 BRPF1P55201 1214 aaPredicted RBP13.21□□□□□ -0.29
HLA-DMB-257ENST00000414017 BEND3Q5T5X7 828 aa13.21□□□□□ -0.29
HLA-DMB-257ENST00000414017 ATF7IPQ6VMQ6 1270 aa13.21□□□□□ -0.29
HLA-DMB-257ENST00000414017 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
HLA-DMB-257ENST00000414017 NLGN2Q8NFZ4 835 aa13.21□□□□□ -0.29
HLA-DMB-257ENST00000414017 LINS1Q8NG48 757 aa13.21□□□□□ -0.29
HLA-DMB-257ENST00000414017 COL24A1Q17RW2 1714 aa13.21□□□□□ -0.3
HLA-DMB-257ENST00000414017 LRP5O75197 1615 aa13.21□□□□□ -0.3
HLA-DMB-257ENST00000414017 ABCC12Q96J65 1359 aa13.2□□□□□ -0.3
HLA-DMB-257ENST00000414017 SH3TC1Q8TE82 1336 aa13.2□□□□□ -0.3
HLA-DMB-257ENST00000414017 A0A0G2JLW4 131 aa13.2□□□□□ -0.3
HLA-DMB-257ENST00000414017 TRIM27P14373 513 aa13.2□□□□□ -0.3
HLA-DMB-257ENST00000414017 CHRNA5P30532 468 aa13.2□□□□□ -0.3
HLA-DMB-257ENST00000414017 C9orf78Q9NZ63 289 aaPredicted RBP13.2□□□□□ -0.3
HLA-DMB-257ENST00000414017 C10orf71Q711Q0 1435 aa13.2□□□□□ -0.3
HLA-DMB-257ENST00000414017 IRS4O14654 1257 aaPredicted RBP13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 C1QBPQ07021 282 aaKnown RBP13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 TRIM28Q13263 835 aaKnown RBP13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 GCKRQ14397 625 aa13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 UBE3BQ7Z3V4 1068 aa13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 C2CD5Q86YS7 1000 aa13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 ZBTB38Q8NAP3 1195 aaPredicted RBP13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 ARHGAP45Q92619 1136 aa13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 SYT17Q9BSW7 474 aa13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 CD2APQ9Y5K6 639 aa13.19□□□□□ -0.3
HLA-DMB-257ENST00000414017 H0YIN7 160 aa13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 ALDH1L1O75891 902 aa13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 PCCAP05165 728 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 DPEP1P16444 411 aa13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 PDE6BP35913 854 aa13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 CCT4P50991 539 aaKnown RBP13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 DZIP1LQ8IYY4 767 aaKnown RBP13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 ZNF622Q969S3 477 aaKnown RBP eCLIP13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 BRIP1Q9BX63 1249 aa13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 IBTKQ9P2D0 1353 aaPredicted RBP13.18□□□□□ -0.3
HLA-DMB-257ENST00000414017 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
HLA-DMB-257ENST00000414017 C3orf67Q6ZVT6 689 aa13.17□□□□□ -0.3
HLA-DMB-257ENST00000414017 ITPRIPQ8IWB1 547 aa13.17□□□□□ -0.3
HLA-DMB-257ENST00000414017 TMEM57Q8N5G2 664 aa13.17□□□□□ -0.3
HLA-DMB-257ENST00000414017 PANK1Q8TE04 598 aa13.17□□□□□ -0.3
HLA-DMB-257ENST00000414017 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
HLA-DMB-257ENST00000414017 ABCC4O15439 1325 aa13.16□□□□□ -0.3
HLA-DMB-257ENST00000414017 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
HLA-DMB-257ENST00000414017 GRM8O00222 908 aa13.16□□□□□ -0.3
HLA-DMB-257ENST00000414017 TGFB2P61812 414 aa13.16□□□□□ -0.3
HLA-DMB-257ENST00000414017 RPGRQ92834 1020 aaKnown RBP13.16□□□□□ -0.3
HLA-DMB-257ENST00000414017 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
HLA-DMB-257ENST00000414017 CHMP3Q9Y3E7 222 aa13.16□□□□□ -0.3
HLA-DMB-257ENST00000414017 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
HLA-DMB-257ENST00000414017 H7C1W4 665 aa13.15□□□□□ -0.3
HLA-DMB-257ENST00000414017 RLBP1P12271 317 aa13.15□□□□□ -0.3
HLA-DMB-257ENST00000414017 TNRC6CQ9HCJ0 1690 aaKnown RBP13.15□□□□□ -0.31
HLA-DMB-257ENST00000414017 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.31
HLA-DMB-257ENST00000414017 PDE8AO60658 829 aa13.14□□□□□ -0.31
HLA-DMB-257ENST00000414017 NBPF7P0C2Y1 421 aaPredicted RBP13.14□□□□□ -0.31
HLA-DMB-257ENST00000414017 MS4A1P11836 297 aa13.14□□□□□ -0.31
HLA-DMB-257ENST00000414017 HSP90B1P14625 803 aaKnown RBP13.14□□□□□ -0.31
HLA-DMB-257ENST00000414017 RRP1P56182 461 aaKnown RBP13.14□□□□□ -0.31
HLA-DMB-257ENST00000414017 BCS1LQ9Y276 419 aa13.14□□□□□ -0.31
HLA-DMB-257ENST00000414017 ANKRD31Q8N7Z5 1873 aa13.14□□□□□ -0.31
HLA-DMB-257ENST00000414017 CDHR2Q9BYE9 1310 aa13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 UBTFL1P0CB47 393 aaPredicted RBP13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 SLC10A5Q5PT55 438 aa13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 C20orf194Q5TEA3 1177 aa13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 INTS3Q68E01 1043 aaKnown RBP13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 MASTLQ96GX5 879 aa13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 RBM17Q96I25 401 aaKnown RBP13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 SUCLG2Q96I99 432 aa13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 MEIS3Q99687 375 aa13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 PIM2Q9P1W9 311 aa13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
HLA-DMB-257ENST00000414017 SRGNP10124 158 aa13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 NPR1P16066 1061 aa13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 CASP7P55210 303 aa13.12□□□□□ -0.31
HLA-DMB-257ENST00000414017 CTSWP56202 376 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms