RNA–Protein interactions for RNA: ENST00000413637.1

LINC01044-201, Transcript of long intergenic non-protein coding RNA 1044, humanhuman

TSL 3 BASIC

Gene LINC01044, Length 657 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01044-201ENST00000413637 PDZRN3Q9UPQ7 1066 aa15.43■□□□□ 0.06
LINC01044-201ENST00000413637 CACNA1FO60840 1977 aa15.42■□□□□ 0.06
LINC01044-201ENST00000413637 COL4A5P29400 1685 aa15.42■□□□□ 0.06
LINC01044-201ENST00000413637 NPR1P16066 1061 aa15.42■□□□□ 0.06
LINC01044-201ENST00000413637 CCDC27Q2M243 656 aa15.42■□□□□ 0.06
LINC01044-201ENST00000413637 CNKSR1Q969H4 720 aa15.42■□□□□ 0.06
LINC01044-201ENST00000413637 LMNB1P20700 586 aa15.41■□□□□ 0.06
LINC01044-201ENST00000413637 NLRP10Q86W26 655 aa15.41■□□□□ 0.06
LINC01044-201ENST00000413637 PHAXQ9H814 394 aaKnown RBP15.41■□□□□ 0.06
LINC01044-201ENST00000413637 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
LINC01044-201ENST00000413637 WDR90Q96KV7 1748 aa15.4■□□□□ 0.06
LINC01044-201ENST00000413637 NYXQ9GZU5 481 aa15.4■□□□□ 0.06
LINC01044-201ENST00000413637 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
LINC01044-201ENST00000413637 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
LINC01044-201ENST00000413637 GTF2E1P29083 439 aaPredicted RBP15.39■□□□□ 0.05
LINC01044-201ENST00000413637 TCIRG1Q13488 830 aa15.39■□□□□ 0.05
LINC01044-201ENST00000413637 LRRC37AA6NMS7 1700 aa15.39■□□□□ 0.05
LINC01044-201ENST00000413637 ATP5J2-PTCD1G3V325 749 aa15.38■□□□□ 0.05
LINC01044-201ENST00000413637 TCERG1O14776 1098 aaKnown RBP15.38■□□□□ 0.05
LINC01044-201ENST00000413637 HOXA10P31260 410 aaPredicted RBP15.38■□□□□ 0.05
LINC01044-201ENST00000413637 CALD1Q05682 793 aaKnown RBP15.38■□□□□ 0.05
LINC01044-201ENST00000413637 PARP10Q53GL7 1025 aa15.38■□□□□ 0.05
LINC01044-201ENST00000413637 FAM9BQ8IZU0 186 aa15.38■□□□□ 0.05
LINC01044-201ENST00000413637 PLBD2Q8NHP8 589 aa15.38■□□□□ 0.05
LINC01044-201ENST00000413637 ISCA1Q9BUE6 129 aa15.38■□□□□ 0.05
LINC01044-201ENST00000413637 UTP14AQ9BVJ6 771 aaKnown RBP15.38■□□□□ 0.05
LINC01044-201ENST00000413637 LTBP3Q9NS15 1303 aa15.38■□□□□ 0.05
LINC01044-201ENST00000413637 MYH3P11055 1940 aa15.37■□□□□ 0.05
LINC01044-201ENST00000413637 HCLS1P14317 486 aaPredicted RBP15.37■□□□□ 0.05
LINC01044-201ENST00000413637 SLC10A5Q5PT55 438 aa15.37■□□□□ 0.05
LINC01044-201ENST00000413637 ANKRD13DQ6ZTN6 518 aa15.37■□□□□ 0.05
LINC01044-201ENST00000413637 PPP1R42Q7Z4L9 355 aa15.37■□□□□ 0.05
LINC01044-201ENST00000413637 TAOK3Q9H2K8 898 aa15.37■□□□□ 0.05
LINC01044-201ENST00000413637 HYPKQ9NX55 129 aa15.37■□□□□ 0.05
LINC01044-201ENST00000413637 SPEF2Q9C093 1822 aa15.37■□□□□ 0.05
LINC01044-201ENST00000413637 FANCIQ9NVI1 1328 aa15.37■□□□□ 0.05
LINC01044-201ENST00000413637 IL16Q14005 1332 aa15.36■□□□□ 0.05
LINC01044-201ENST00000413637 LTBP1Q14766 1721 aa15.35■□□□□ 0.05
LINC01044-201ENST00000413637 POTECB2RU33 542 aa15.35■□□□□ 0.05
LINC01044-201ENST00000413637 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
LINC01044-201ENST00000413637 CCDC93Q567U6 631 aa15.35■□□□□ 0.05
LINC01044-201ENST00000413637 HSP90AB3PQ58FF7 597 aa15.35■□□□□ 0.05
LINC01044-201ENST00000413637 G2E3Q7L622 706 aa15.35■□□□□ 0.05
LINC01044-201ENST00000413637 RRAGCQ9HB90 399 aa15.35■□□□□ 0.05
LINC01044-201ENST00000413637 DUOX1Q9NRD9 1551 aa15.35■□□□□ 0.05
LINC01044-201ENST00000413637 ABCC4O15439 1325 aa15.35■□□□□ 0.05
LINC01044-201ENST00000413637 ZNF277Q9NRM2 450 aaPredicted RBP15.34■□□□□ 0.05
LINC01044-201ENST00000413637 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
LINC01044-201ENST00000413637 ZC3H4Q9UPT8 1303 aaKnown RBP15.34■□□□□ 0.05
LINC01044-201ENST00000413637 GLTPD2A6NH11 291 aa15.33■□□□□ 0.04
LINC01044-201ENST00000413637 ALDH1B1P30837 517 aa15.33■□□□□ 0.04
LINC01044-201ENST00000413637 TWISTNBQ3B726 338 aaPredicted RBP15.33■□□□□ 0.04
LINC01044-201ENST00000413637 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.04
LINC01044-201ENST00000413637 FAM89AQ96GI7 184 aa15.33■□□□□ 0.04
LINC01044-201ENST00000413637 CRAMP1Q96RY5 1269 aa15.33■□□□□ 0.04
LINC01044-201ENST00000413637 SCN4AP35499 1836 aa15.32■□□□□ 0.04
LINC01044-201ENST00000413637 FKBP4Q02790 459 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC01044-201ENST00000413637 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
LINC01044-201ENST00000413637 SOGA3Q5TF21 947 aa15.32■□□□□ 0.04
LINC01044-201ENST00000413637 JARID2Q92833 1246 aaPredicted RBP15.32■□□□□ 0.04
LINC01044-201ENST00000413637 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
LINC01044-201ENST00000413637 RNF123Q5XPI4 1314 aa15.32■□□□□ 0.04
LINC01044-201ENST00000413637 KDM2BQ8NHM5 1336 aa15.32■□□□□ 0.04
LINC01044-201ENST00000413637 SH3TC1Q8TE82 1336 aa15.32■□□□□ 0.04
LINC01044-201ENST00000413637 ZNF521Q96K83 1311 aa15.32■□□□□ 0.04
LINC01044-201ENST00000413637 PPEF1O14829 653 aaPredicted RBP15.31■□□□□ 0.04
LINC01044-201ENST00000413637 EXOSC9Q06265 439 aaKnown RBP15.31■□□□□ 0.04
LINC01044-201ENST00000413637 CCDC30Q5VVM6 783 aa15.31■□□□□ 0.04
LINC01044-201ENST00000413637 WDR63Q8IWG1 891 aa15.31■□□□□ 0.04
LINC01044-201ENST00000413637 RBM17Q96I25 401 aaKnown RBP15.31■□□□□ 0.04
LINC01044-201ENST00000413637 MYD88Q99836 296 aa15.31■□□□□ 0.04
LINC01044-201ENST00000413637 ZNF541Q9H0D2 1346 aa15.31■□□□□ 0.04
LINC01044-201ENST00000413637 TOMM70O94826 608 aa15.3■□□□□ 0.04
LINC01044-201ENST00000413637 TRIM28Q13263 835 aaKnown RBP15.3■□□□□ 0.04
LINC01044-201ENST00000413637 RIC3Q7Z5B4 369 aa15.3■□□□□ 0.04
LINC01044-201ENST00000413637 ADAMTSL1Q8N6G6 1762 aa15.29■□□□□ 0.04
LINC01044-201ENST00000413637 VAMP4O75379 141 aa15.29■□□□□ 0.04
LINC01044-201ENST00000413637 DDNO94850 711 aaPredicted RBP15.29■□□□□ 0.04
LINC01044-201ENST00000413637 IGKV5-2P06315 115 aa15.29■□□□□ 0.04
LINC01044-201ENST00000413637 GOLGA2Q08379 1002 aa15.29■□□□□ 0.04
LINC01044-201ENST00000413637 RTKN2Q8IZC4 609 aa15.29■□□□□ 0.04
LINC01044-201ENST00000413637 METTL22Q9BUU2 404 aaPredicted RBP15.29■□□□□ 0.04
LINC01044-201ENST00000413637 MAP3K2Q9Y2U5 619 aa15.29■□□□□ 0.04
LINC01044-201ENST00000413637 PI4KAP2A4QPH2 592 aa15.28■□□□□ 0.04
LINC01044-201ENST00000413637 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
LINC01044-201ENST00000413637 PI4KAP1Q8N8J0 262 aa15.28■□□□□ 0.04
LINC01044-201ENST00000413637 PSMD1Q99460 953 aa15.28■□□□□ 0.04
LINC01044-201ENST00000413637 ATP6V0A2Q9Y487 856 aa15.28■□□□□ 0.04
LINC01044-201ENST00000413637 IRS4O14654 1257 aaPredicted RBP15.27■□□□□ 0.04
LINC01044-201ENST00000413637 SLC4A2P04920 1241 aa15.27■□□□□ 0.04
LINC01044-201ENST00000413637 POTEIP0CG38 1075 aa15.27■□□□□ 0.04
LINC01044-201ENST00000413637 POTEJP0CG39 1038 aa15.27■□□□□ 0.04
LINC01044-201ENST00000413637 HSPA6P17066 643 aa15.27■□□□□ 0.04
LINC01044-201ENST00000413637 CELF1Q92879 486 aaKnown RBP15.27■□□□□ 0.04
LINC01044-201ENST00000413637 SCN9AQ15858 1988 aa15.27■□□□□ 0.03
LINC01044-201ENST00000413637 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
LINC01044-201ENST00000413637 SF3B3Q15393 1217 aaKnown RBP15.26■□□□□ 0.03
LINC01044-201ENST00000413637 CWF19L2Q2TBE0 894 aaKnown RBP15.26■□□□□ 0.03
LINC01044-201ENST00000413637 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
LINC01044-201ENST00000413637 RBM46Q8TBY0 533 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms