RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 RIOK3O14730 519 aaKnown RBP20.93■□□□□ 0.94
SDCBP-202ENST00000413219 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.93■□□□□ 0.94
SDCBP-202ENST00000413219 SPC24Q8NBT2 197 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 SLC26A8Q96RN1 970 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 EID1Q9Y6B2 187 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 NPHP3Q7Z494 1330 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 SLC27A2O14975 620 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 LIG1P18858 919 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 RNF20Q5VTR2 975 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 PLPPR3Q6T4P5 718 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 CDC37L1Q7L3B6 337 aa20.93■□□□□ 0.94
SDCBP-202ENST00000413219 KCNJ4P48050 445 aa20.92■□□□□ 0.94
SDCBP-202ENST00000413219 TNMDQ9H2S6 317 aa20.92■□□□□ 0.94
SDCBP-202ENST00000413219 DBF4Q9UBU7 674 aaPredicted RBP20.92■□□□□ 0.94
SDCBP-202ENST00000413219 ZSCAN20P17040 1043 aaPredicted RBP20.92■□□□□ 0.94
SDCBP-202ENST00000413219 SYCP1Q15431 976 aa20.92■□□□□ 0.94
SDCBP-202ENST00000413219 PPP4R3BQ5MIZ7 849 aa20.92■□□□□ 0.94
SDCBP-202ENST00000413219 PDCL2Q8N4E4 241 aa20.92■□□□□ 0.94
SDCBP-202ENST00000413219 SLIT1O75093 1534 aa20.91■□□□□ 0.94
SDCBP-202ENST00000413219 BLOC1S2Q6QNY1 142 aa20.91■□□□□ 0.94
SDCBP-202ENST00000413219 TDRD7Q8NHU6 1098 aaKnown RBP20.91■□□□□ 0.94
SDCBP-202ENST00000413219 LTV1Q96GA3 475 aaPredicted RBP20.91■□□□□ 0.94
SDCBP-202ENST00000413219 CLSTN2Q9H4D0 955 aa20.91■□□□□ 0.94
SDCBP-202ENST00000413219 JCADQ9P266 1359 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 PTGS1P23219 599 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 NMIQ13287 307 aaPredicted RBP20.9■□□□□ 0.94
SDCBP-202ENST00000413219 AACSQ86V21 672 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 GTPBP4Q9BZE4 634 aaKnown RBP20.9■□□□□ 0.94
SDCBP-202ENST00000413219 CBX8Q9HC52 389 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 C9orf78Q9NZ63 289 aaPredicted RBP20.9■□□□□ 0.94
SDCBP-202ENST00000413219 ARHGAP23Q9P227 1491 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 GOLGA6L4A6NEF3 574 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 CAVIN2O95810 425 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 RPS6KB1P23443 525 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 TSGA10IPQ3SY00 556 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 PLA2G4DQ86XP0 818 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 SPATA32Q96LK8 384 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 DACT1Q9NYF0 836 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 HMG20BQ9P0W2 317 aa20.9■□□□□ 0.94
SDCBP-202ENST00000413219 LMO7Q8WWI1 1683 aa20.89■□□□□ 0.94
SDCBP-202ENST00000413219 NPHP4O75161 1426 aaPredicted RBP20.89■□□□□ 0.93
SDCBP-202ENST00000413219 LUZP1Q86V48 1076 aa20.89■□□□□ 0.93
SDCBP-202ENST00000413219 GIGYF1O75420 1035 aaPredicted RBP20.89■□□□□ 0.93
SDCBP-202ENST00000413219 ANO6Q4KMQ2 910 aa20.89■□□□□ 0.93
SDCBP-202ENST00000413219 KSR2Q6VAB6 950 aa20.89■□□□□ 0.93
SDCBP-202ENST00000413219 IP6K1Q92551 441 aa20.89■□□□□ 0.93
SDCBP-202ENST00000413219 FAM227BQ96M60 508 aa20.89■□□□□ 0.93
SDCBP-202ENST00000413219 LGR6Q9HBX8 967 aa20.89■□□□□ 0.93
SDCBP-202ENST00000413219 MED23Q9ULK4 1368 aa20.88■□□□□ 0.93
SDCBP-202ENST00000413219 ZNF75DP51815 510 aa20.88■□□□□ 0.93
SDCBP-202ENST00000413219 FERMT3Q86UX7 667 aa20.88■□□□□ 0.93
SDCBP-202ENST00000413219 USHBP1Q8N6Y0 703 aa20.88■□□□□ 0.93
SDCBP-202ENST00000413219 ABTB2Q8N961 1025 aa20.88■□□□□ 0.93
SDCBP-202ENST00000413219 LEO1Q8WVC0 666 aaPredicted RBP20.88■□□□□ 0.93
SDCBP-202ENST00000413219 PRDM10Q9NQV6 1147 aa20.88■□□□□ 0.93
SDCBP-202ENST00000413219 PA2G4Q9UQ80 394 aaKnown RBP20.88■□□□□ 0.93
SDCBP-202ENST00000413219 UTYO14607 1347 aa20.88■□□□□ 0.93
SDCBP-202ENST00000413219 TEFQ10587 303 aa20.87■□□□□ 0.93
SDCBP-202ENST00000413219 CAMK4Q16566 473 aa20.87■□□□□ 0.93
SDCBP-202ENST00000413219 MAP3K2Q9Y2U5 619 aa20.87■□□□□ 0.93
SDCBP-202ENST00000413219 BTBD11A6QL63 1104 aa20.87■□□□□ 0.93
SDCBP-202ENST00000413219 CDC25BP30305 580 aa20.87■□□□□ 0.93
SDCBP-202ENST00000413219 ATP2B3Q16720 1220 aa20.87■□□□□ 0.93
SDCBP-202ENST00000413219 AKAP4Q5JQC9 854 aa20.87■□□□□ 0.93
SDCBP-202ENST00000413219 CCDC186Q7Z3E2 898 aa20.87■□□□□ 0.93
SDCBP-202ENST00000413219 OVOS2A0A0G2JMS6 1433 aa20.86■□□□□ 0.93
SDCBP-202ENST00000413219 NCAPD2Q15021 1401 aa20.86■□□□□ 0.93
SDCBP-202ENST00000413219 FAM177BA6PVY3 158 aa20.86■□□□□ 0.93
SDCBP-202ENST00000413219 SMTNL1A8MU46 457 aa20.86■□□□□ 0.93
SDCBP-202ENST00000413219 KCNQ3O43525 872 aa20.86■□□□□ 0.93
SDCBP-202ENST00000413219 TOB2Q14106 344 aaPredicted RBP20.86■□□□□ 0.93
SDCBP-202ENST00000413219 DDX54Q8TDD1 881 aaKnown RBP20.86■□□□□ 0.93
SDCBP-202ENST00000413219 SASH1O94885 1247 aa20.85■□□□□ 0.93
SDCBP-202ENST00000413219 CBX1P83916 185 aa20.85■□□□□ 0.93
SDCBP-202ENST00000413219 G3BP1Q13283 466 aaKnown RBP eCLIP20.85■□□□□ 0.93
SDCBP-202ENST00000413219 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
SDCBP-202ENST00000413219 DTNBO60941 627 aa20.85■□□□□ 0.93
SDCBP-202ENST00000413219 ANXA1P04083 346 aa20.85■□□□□ 0.93
SDCBP-202ENST00000413219 FAM173BQ6P4H8 233 aa20.85■□□□□ 0.93
SDCBP-202ENST00000413219 LARP1Q6PKG0 1096 aaKnown RBP20.85■□□□□ 0.93
SDCBP-202ENST00000413219 CKAP2LQ8IYA6 745 aa20.85■□□□□ 0.93
SDCBP-202ENST00000413219 EAF2Q96CJ1 260 aaPredicted RBP20.85■□□□□ 0.93
SDCBP-202ENST00000413219 FEZ1Q99689 392 aa20.85■□□□□ 0.93
SDCBP-202ENST00000413219 A0A0D9SFI3 127 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 KRT32Q14532 448 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 ZSCAN25Q6NSZ9 544 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 LINS1Q8NG48 757 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 TRIM5Q9C035 493 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 CHMP3Q9Y3E7 222 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 LTN1O94822 1766 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 HEG1Q9ULI3 1381 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 DRC7Q8IY82 874 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 PAXBP1Q9Y5B6 917 aa20.84■□□□□ 0.93
SDCBP-202ENST00000413219 MRC1P22897 1456 aa20.83■□□□□ 0.93
SDCBP-202ENST00000413219 GRM8O00222 908 aa20.83■□□□□ 0.93
SDCBP-202ENST00000413219 NBPF6Q5VWK0 638 aa20.83■□□□□ 0.93
SDCBP-202ENST00000413219 USPL1Q5W0Q7 1092 aa20.83■□□□□ 0.93
SDCBP-202ENST00000413219 NBPF4Q96M43 638 aa20.83■□□□□ 0.93
SDCBP-202ENST00000413219 FSD1Q9BTV5 496 aa20.83■□□□□ 0.93
SDCBP-202ENST00000413219 ZNF165P49910 485 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms