RNA–Protein interactions for RNA: ENST00000412738.5

RBM39-207, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-207ENST00000412738 ABCC12Q96J65 1359 aa17.88■□□□□ 0.45
RBM39-207ENST00000412738 NTSR2O95665 410 aa17.87■□□□□ 0.45
RBM39-207ENST00000412738 VEGFAP15692 232 aaPredicted RBP17.87■□□□□ 0.45
RBM39-207ENST00000412738 RBM17Q96I25 401 aaKnown RBP17.87■□□□□ 0.45
RBM39-207ENST00000412738 NLRP3Q96P20 1036 aa17.87■□□□□ 0.45
RBM39-207ENST00000412738 IFT57Q9NWB7 429 aa17.87■□□□□ 0.45
RBM39-207ENST00000412738 DBF4Q9UBU7 674 aaPredicted RBP17.87■□□□□ 0.45
RBM39-207ENST00000412738 FKBP4Q02790 459 aaKnown RBP eCLIP17.86■□□□□ 0.45
RBM39-207ENST00000412738 CRY2Q49AN0 593 aa17.86■□□□□ 0.45
RBM39-207ENST00000412738 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
RBM39-207ENST00000412738 C7orf43Q8WVR3 580 aa17.86■□□□□ 0.45
RBM39-207ENST00000412738 RIC1Q4ADV7 1423 aa17.85■□□□□ 0.45
RBM39-207ENST00000412738 TMX4Q9H1E5 349 aaPredicted RBP17.85■□□□□ 0.45
RBM39-207ENST00000412738 DICER1Q9UPY3 1922 aaKnown RBP17.84■□□□□ 0.45
RBM39-207ENST00000412738 RNF123Q5XPI4 1314 aa17.84■□□□□ 0.45
RBM39-207ENST00000412738 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
RBM39-207ENST00000412738 APLP1P51693 650 aa17.84■□□□□ 0.45
RBM39-207ENST00000412738 FSTL1Q12841 308 aa17.84■□□□□ 0.45
RBM39-207ENST00000412738 TCIRG1Q13488 830 aa17.84■□□□□ 0.45
RBM39-207ENST00000412738 MRS2Q9HD23 443 aa17.84■□□□□ 0.45
RBM39-207ENST00000412738 HYPKQ9NX55 129 aa17.84■□□□□ 0.45
RBM39-207ENST00000412738 CCDC184Q52MB2 194 aa17.83■□□□□ 0.44
RBM39-207ENST00000412738 CC2D2BQ6DHV5 1058 aa17.83■□□□□ 0.44
RBM39-207ENST00000412738 OLFM4Q6UX06 510 aa17.83■□□□□ 0.44
RBM39-207ENST00000412738 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
RBM39-207ENST00000412738 SMC1BQ8NDV3 1235 aa17.83■□□□□ 0.44
RBM39-207ENST00000412738 PLBD2Q8NHP8 589 aa17.83■□□□□ 0.44
RBM39-207ENST00000412738 CHMP4AQ9BY43 222 aa17.83■□□□□ 0.44
RBM39-207ENST00000412738 ZNF277Q9NRM2 450 aaPredicted RBP17.83■□□□□ 0.44
RBM39-207ENST00000412738 TRMT112Q9UI30 125 aaKnown RBP17.83■□□□□ 0.44
RBM39-207ENST00000412738 ELL2O00472 640 aaPredicted RBP17.82■□□□□ 0.44
RBM39-207ENST00000412738 HOXA10P31260 410 aaPredicted RBP17.82■□□□□ 0.44
RBM39-207ENST00000412738 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
RBM39-207ENST00000412738 CRAMP1Q96RY5 1269 aa17.82■□□□□ 0.44
RBM39-207ENST00000412738 PPEF1O14829 653 aaPredicted RBP17.81■□□□□ 0.44
RBM39-207ENST00000412738 GRIPAP1Q4V328 841 aa17.81■□□□□ 0.44
RBM39-207ENST00000412738 SLC10A5Q5PT55 438 aa17.81■□□□□ 0.44
RBM39-207ENST00000412738 SYNE4Q8N205 404 aa17.81■□□□□ 0.44
RBM39-207ENST00000412738 ANKRD36CQ5JPF3 1778 aa17.81■□□□□ 0.44
RBM39-207ENST00000412738 SH3TC1Q8TE82 1336 aa17.8■□□□□ 0.44
RBM39-207ENST00000412738 TCERG1O14776 1098 aaKnown RBP17.8■□□□□ 0.44
RBM39-207ENST00000412738 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
RBM39-207ENST00000412738 PSMD1Q99460 953 aa17.8■□□□□ 0.44
RBM39-207ENST00000412738 DDNO94850 711 aaPredicted RBP17.79■□□□□ 0.44
RBM39-207ENST00000412738 GOLGA2Q08379 1002 aa17.79■□□□□ 0.44
RBM39-207ENST00000412738 RIC3Q7Z5B4 369 aa17.79■□□□□ 0.44
RBM39-207ENST00000412738 JDP2Q8WYK2 163 aa17.79■□□□□ 0.44
RBM39-207ENST00000412738 WDR90Q96KV7 1748 aa17.78■□□□□ 0.44
RBM39-207ENST00000412738 IQCA1LA6NCM1 817 aa17.78■□□□□ 0.44
RBM39-207ENST00000412738 HCLS1P14317 486 aaPredicted RBP17.78■□□□□ 0.44
RBM39-207ENST00000412738 CCDC27Q2M243 656 aa17.78■□□□□ 0.44
RBM39-207ENST00000412738 C3orf67Q6ZVT6 689 aa17.78■□□□□ 0.44
RBM39-207ENST00000412738 ATP5J2-PTCD1G3V325 749 aa17.77■□□□□ 0.44
RBM39-207ENST00000412738 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
RBM39-207ENST00000412738 DDX46Q7L014 1031 aaKnown RBP17.77■□□□□ 0.44
RBM39-207ENST00000412738 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.44
RBM39-207ENST00000412738 ZNF428Q96B54 188 aa17.77■□□□□ 0.44
RBM39-207ENST00000412738 ABCC4O15439 1325 aa17.76■□□□□ 0.43
RBM39-207ENST00000412738 POTECB2RU33 542 aa17.76■□□□□ 0.43
RBM39-207ENST00000412738 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
RBM39-207ENST00000412738 BBOX1O75936 387 aa17.75■□□□□ 0.43
RBM39-207ENST00000412738 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
RBM39-207ENST00000412738 WWC1Q8IX03 1113 aa17.75■□□□□ 0.43
RBM39-207ENST00000412738 PHAXQ9H814 394 aaKnown RBP17.75■□□□□ 0.43
RBM39-207ENST00000412738 ATP6V0A2Q9Y487 856 aa17.75■□□□□ 0.43
RBM39-207ENST00000412738 EIF6P56537 245 aaKnown RBP17.74■□□□□ 0.43
RBM39-207ENST00000412738 LARGE2Q8N3Y3 721 aa17.74■□□□□ 0.43
RBM39-207ENST00000412738 TSR2Q969E8 191 aaKnown RBP17.74■□□□□ 0.43
RBM39-207ENST00000412738 FAM89AQ96GI7 184 aa17.74■□□□□ 0.43
RBM39-207ENST00000412738 FZD9O00144 591 aa17.73■□□□□ 0.43
RBM39-207ENST00000412738 GRAPQ13588 217 aa17.73■□□□□ 0.43
RBM39-207ENST00000412738 NCBP3Q53F19 620 aaKnown RBP17.73■□□□□ 0.43
RBM39-207ENST00000412738 SUPT20HQ8NEM7 779 aa17.73■□□□□ 0.43
RBM39-207ENST00000412738 GRAPLQ8TC17 118 aaPredicted RBP17.73■□□□□ 0.43
RBM39-207ENST00000412738 L3MBTL3Q96JM7 780 aaPredicted RBP17.73■□□□□ 0.43
RBM39-207ENST00000412738 STK31Q9BXU1 1019 aa17.73■□□□□ 0.43
RBM39-207ENST00000412738 SALL2Q9Y467 1007 aaPredicted RBP17.73■□□□□ 0.43
RBM39-207ENST00000412738 ZNF541Q9H0D2 1346 aa17.72■□□□□ 0.43
RBM39-207ENST00000412738 HSP90B1P14625 803 aaKnown RBP17.72■□□□□ 0.43
RBM39-207ENST00000412738 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
RBM39-207ENST00000412738 RTL5Q5HYW3 569 aaPredicted RBP17.72■□□□□ 0.43
RBM39-207ENST00000412738 DPP8Q6V1X1 898 aaPredicted RBP17.72■□□□□ 0.43
RBM39-207ENST00000412738 SP8Q8IXZ3 490 aa17.72■□□□□ 0.43
RBM39-207ENST00000412738 GPC2Q8N158 579 aa17.72■□□□□ 0.43
RBM39-207ENST00000412738 TSPYL6Q8N831 410 aa17.72■□□□□ 0.43
RBM39-207ENST00000412738 MYD88Q99836 296 aa17.72■□□□□ 0.43
RBM39-207ENST00000412738 SNED1Q8TER0 1413 aa17.72■□□□□ 0.43
RBM39-207ENST00000412738 IRS4O14654 1257 aaPredicted RBP17.71■□□□□ 0.43
RBM39-207ENST00000412738 PPIP5K2O43314 1243 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
RBM39-207ENST00000412738 CHADLQ6NUI6 762 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 TMC4Q7Z404 712 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 NIM1KQ8IY84 436 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 MPNDQ8N594 471 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 VPS33BQ9H267 617 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 HACL1Q9UJ83 578 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 GJA3Q9Y6H8 435 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 LAMB2P55268 1798 aa17.71■□□□□ 0.43
RBM39-207ENST00000412738 IL16Q14005 1332 aa17.71■□□□□ 0.42
RBM39-207ENST00000412738 SCN4AP35499 1836 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms